RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CCDC61Q9Y6R9 512 aa31.28■■■□□ 2.6
CBWD3-207ENST00000611426 SIN3AQ96ST3 1273 aa31.27■■■□□ 2.6
CBWD3-207ENST00000611426 BTG4Q9NY30 223 aa31.25■■■□□ 2.59
CBWD3-207ENST00000611426 CCDC125Q86Z20 511 aa31.24■■■□□ 2.59
CBWD3-207ENST00000611426 SEPT12Q8IYM1 358 aa31.24■■■□□ 2.59
CBWD3-207ENST00000611426 CENPJQ9HC77 1338 aaPredicted RBP31.24■■■□□ 2.59
CBWD3-207ENST00000611426 ACEP12821 1306 aa31.23■■■□□ 2.59
CBWD3-207ENST00000611426 NEUROD1Q13562 356 aa31.22■■■□□ 2.59
CBWD3-207ENST00000611426 NBPF8Q3BBV2 869 aa31.22■■■□□ 2.59
CBWD3-207ENST00000611426 PLEKHG3A1L390 1219 aa31.21■■■□□ 2.59
CBWD3-207ENST00000611426 SRPK2P78362 688 aaKnown RBP31.21■■■□□ 2.59
CBWD3-207ENST00000611426 COL14A1Q05707 1796 aaKnown RBP31.21■■■□□ 2.59
CBWD3-207ENST00000611426 POLR3AO14802 1390 aaPredicted RBP31.2■■■□□ 2.59
CBWD3-207ENST00000611426 ONECUT3O60422 494 aaPredicted RBP31.2■■■□□ 2.59
CBWD3-207ENST00000611426 TOPAZ1Q8N9V7 1692 aa31.19■■■□□ 2.58
CBWD3-207ENST00000611426 BRWD3Q6RI45 1802 aa31.19■■■□□ 2.58
CBWD3-207ENST00000611426 PRDM11Q9NQV5 511 aa31.17■■■□□ 2.58
CBWD3-207ENST00000611426 CRYBG1Q9Y4K1 1723 aa31.17■■■□□ 2.58
CBWD3-207ENST00000611426 NUTM2GQ5VZR2 741 aa31.17■■■□□ 2.58
CBWD3-207ENST00000611426 CABP2Q9NPB3 220 aa31.17■■■□□ 2.58
CBWD3-207ENST00000611426 NRAPQ86VF7 1730 aa31.16■■■□□ 2.58
CBWD3-207ENST00000611426 A0A0G2JS52 829 aa31.15■■■□□ 2.58
CBWD3-207ENST00000611426 MYT1Q01538 1121 aa31.15■■■□□ 2.58
CBWD3-207ENST00000611426 FAM98CQ17RN3 349 aaKnown RBP31.13■■■□□ 2.57
CBWD3-207ENST00000611426 KRT27Q7Z3Y8 459 aa31.13■■■□□ 2.57
CBWD3-207ENST00000611426 PPIP5K1Q6PFW1 1433 aa31.12■■■□□ 2.57
CBWD3-207ENST00000611426 QRICH2Q9H0J4 1663 aa31.12■■■□□ 2.57
CBWD3-207ENST00000611426 ABTB2Q8N961 1025 aa31.12■■■□□ 2.57
CBWD3-207ENST00000611426 KIAA0232Q92628 1395 aa31.11■■■□□ 2.57
CBWD3-207ENST00000611426 ZC3H6P61129 1189 aaKnown RBP31.1■■■□□ 2.57
CBWD3-207ENST00000611426 BLMP54132 1417 aaPredicted RBP31.1■■■□□ 2.57
CBWD3-207ENST00000611426 CHRNA2Q15822 529 aa31.09■■■□□ 2.57
CBWD3-207ENST00000611426 TRPM1Q7Z4N2 1603 aa31.09■■■□□ 2.57
CBWD3-207ENST00000611426 PHRF1Q9P1Y6 1649 aaKnown RBP31.08■■■□□ 2.57
CBWD3-207ENST00000611426 SPATA31A5Q5VU36 1347 aa31.08■■■□□ 2.57
CBWD3-207ENST00000611426 SPATA31A7Q8IWB4 1347 aa31.08■■■□□ 2.57
CBWD3-207ENST00000611426 ROCK2O75116 1388 aaKnown RBP31.07■■■□□ 2.57
CBWD3-207ENST00000611426 SF3B2Q13435 895 aaKnown RBP31.06■■■□□ 2.56
CBWD3-207ENST00000611426 ZRANB1Q9UGI0 708 aa31.06■■■□□ 2.56
CBWD3-207ENST00000611426 CABP1Q9NZU7 370 aa31.05■■■□□ 2.56
CBWD3-207ENST00000611426 EVC2Q86UK5 1308 aa31.04■■■□□ 2.56
CBWD3-207ENST00000611426 STRN4Q9NRL3 753 aa31.04■■■□□ 2.56
CBWD3-207ENST00000611426 NLRP13Q86W25 1043 aa31.03■■■□□ 2.56
CBWD3-207ENST00000611426 ZEB1P37275 1124 aaPredicted RBP31.02■■■□□ 2.56
CBWD3-207ENST00000611426 EVA1CP58658 441 aa31■■■□□ 2.55
CBWD3-207ENST00000611426 DEFB132Q7Z7B7 95 aa31■■■□□ 2.55
CBWD3-207ENST00000611426 BRD4O60885 1362 aaPredicted RBP31■■■□□ 2.55
CBWD3-207ENST00000611426 USP19O94966 1318 aa30.99■■■□□ 2.55
CBWD3-207ENST00000611426 SPATA31A1Q5TZJ5 1347 aa30.99■■■□□ 2.55
CBWD3-207ENST00000611426 NRKQ7Z2Y5 1582 aa30.97■■■□□ 2.55
CBWD3-207ENST00000611426 GCP02774 474 aa30.96■■■□□ 2.55
CBWD3-207ENST00000611426 USP6P35125 1406 aa30.95■■■□□ 2.55
CBWD3-207ENST00000611426 CPDO75976 1380 aa30.95■■■□□ 2.54
CBWD3-207ENST00000611426 SRCAPQ6ZRS2 3230 aa30.94■■■□□ 2.54
CBWD3-207ENST00000611426 NLRP6P59044 892 aa30.93■■■□□ 2.54
CBWD3-207ENST00000611426 USP35Q9P2H5 1018 aa30.93■■■□□ 2.54
CBWD3-207ENST00000611426 FAM182BQ5T319 152 aa30.92■■■□□ 2.54
CBWD3-207ENST00000611426 THSD7AQ9UPZ6 1657 aa30.92■■■□□ 2.54
CBWD3-207ENST00000611426 CCER1Q8TC90 406 aaPredicted RBP30.92■■■□□ 2.54
CBWD3-207ENST00000611426 CAMTA1Q9Y6Y1 1673 aa30.91■■■□□ 2.54
CBWD3-207ENST00000611426 SSH2Q76I76 1423 aa30.91■■■□□ 2.54
CBWD3-207ENST00000611426 ZNF692Q9BU19 519 aaPredicted RBP30.9■■■□□ 2.54
CBWD3-207ENST00000611426 LARP1Q6PKG0 1096 aaKnown RBP30.89■■■□□ 2.54
CBWD3-207ENST00000611426 CARD11Q9BXL7 1154 aa30.89■■■□□ 2.54
CBWD3-207ENST00000611426 BAG6P46379 1132 aa30.88■■■□□ 2.53
CBWD3-207ENST00000611426 TONSLQ96HA7 1378 aa30.88■■■□□ 2.53
CBWD3-207ENST00000611426 CLSPNQ9HAW4 1339 aa30.87■■■□□ 2.53
CBWD3-207ENST00000611426 ZBTB7CA1YPR0 619 aa30.87■■■□□ 2.53
CBWD3-207ENST00000611426 LMO7Q8WWI1 1683 aa30.87■■■□□ 2.53
CBWD3-207ENST00000611426 BARGINQ6ZT62 677 aa30.85■■■□□ 2.53
CBWD3-207ENST00000611426 TCP11L2Q8N4U5 519 aa30.83■■■□□ 2.53
CBWD3-207ENST00000611426 TTC21BQ7Z4L5 1316 aa30.83■■■□□ 2.53
CBWD3-207ENST00000611426 PIK3C2AO00443 1686 aa30.81■■■□□ 2.52
CBWD3-207ENST00000611426 SLIT3O75094 1523 aa30.81■■■□□ 2.52
CBWD3-207ENST00000611426 PDE3BQ13370 1112 aa30.8■■■□□ 2.52
CBWD3-207ENST00000611426 FAM196AQ6ZSG2 479 aa30.8■■■□□ 2.52
CBWD3-207ENST00000611426 RGPD1P0DJD0 1748 aa30.8■■■□□ 2.52
CBWD3-207ENST00000611426 SBNO2Q9Y2G9 1366 aa30.8■■■□□ 2.52
CBWD3-207ENST00000611426 COL5A2P05997 1499 aaPredicted RBP30.8■■■□□ 2.52
CBWD3-207ENST00000611426 THRAP3Q9Y2W1 955 aaKnown RBP30.79■■■□□ 2.52
CBWD3-207ENST00000611426 AKAP12Q02952 1782 aa30.79■■■□□ 2.52
CBWD3-207ENST00000611426 EN1Q05925 392 aaPredicted RBP30.79■■■□□ 2.52
CBWD3-207ENST00000611426 AATKQ6ZMQ8 1374 aa30.78■■■□□ 2.52
CBWD3-207ENST00000611426 TTC21AQ8NDW8 1320 aa30.77■■■□□ 2.52
CBWD3-207ENST00000611426 KTN1Q86UP2 1357 aaKnown RBP30.77■■■□□ 2.52
CBWD3-207ENST00000611426 CPSF1Q10570 1443 aaKnown RBP30.77■■■□□ 2.52
CBWD3-207ENST00000611426 KCNH5Q8NCM2 988 aa30.76■■■□□ 2.51
CBWD3-207ENST00000611426 TRIM37O94972 964 aa30.75■■■□□ 2.51
CBWD3-207ENST00000611426 CRB1P82279 1406 aa30.74■■■□□ 2.51
CBWD3-207ENST00000611426 SOX12O15370 315 aa30.73■■■□□ 2.51
CBWD3-207ENST00000611426 TMC1Q8TDI8 760 aa30.72■■■□□ 2.51
CBWD3-207ENST00000611426 TOM1L2Q6ZVM7 507 aa30.71■■■□□ 2.51
CBWD3-207ENST00000611426 ARHGEF25Q86VW2 580 aa30.71■■■□□ 2.51
CBWD3-207ENST00000611426 AXIN2Q9Y2T1 843 aa30.7■■■□□ 2.51
CBWD3-207ENST00000611426 TNS1Q9HBL0 1735 aaKnown RBP30.7■■■□□ 2.5
CBWD3-207ENST00000611426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.69■■■□□ 2.5
CBWD3-207ENST00000611426 DISP2A7MBM2 1401 aa30.69■■■□□ 2.5
CBWD3-207ENST00000611426 COL18A1P39060 1754 aa30.69■■■□□ 2.5
CBWD3-207ENST00000611426 APBA3O96018 575 aa30.67■■■□□ 2.5
CBWD3-207ENST00000611426 EZH2Q15910 746 aaKnown RBP30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms