RNA–Protein interactions for RNA: ENST00000611331.1

LINC01949-202, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 2

Gene LINC01949, Length 1,618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-202ENST00000611331 IQGAP3Q86VI3 1631 aa11.59□□□□□ -0.55
LINC01949-202ENST00000611331 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
LINC01949-202ENST00000611331 KCNQ2O43526 872 aa11.58□□□□□ -0.56
LINC01949-202ENST00000611331 PARD3Q8TEW0 1356 aa11.58□□□□□ -0.56
LINC01949-202ENST00000611331 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
LINC01949-202ENST00000611331 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
LINC01949-202ENST00000611331 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
LINC01949-202ENST00000611331 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
LINC01949-202ENST00000611331 E9PCH4 1651 aa11.56□□□□□ -0.56
LINC01949-202ENST00000611331 ROBO2Q9HCK4 1378 aa11.55□□□□□ -0.56
LINC01949-202ENST00000611331 SPATA31A3Q5VYP0 1347 aa11.55□□□□□ -0.56
LINC01949-202ENST00000611331 NUP188Q5SRE5 1749 aa11.55□□□□□ -0.56
LINC01949-202ENST00000611331 RREB1Q92766 1687 aa11.54□□□□□ -0.56
LINC01949-202ENST00000611331 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
LINC01949-202ENST00000611331 TRIM37O94972 964 aa11.54□□□□□ -0.56
LINC01949-202ENST00000611331 APBA3O96018 575 aa11.54□□□□□ -0.56
LINC01949-202ENST00000611331 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
LINC01949-202ENST00000611331 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
LINC01949-202ENST00000611331 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
LINC01949-202ENST00000611331 CDC42BPGQ6DT37 1551 aa11.53□□□□□ -0.56
LINC01949-202ENST00000611331 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
LINC01949-202ENST00000611331 ANKRD50Q9ULJ7 1429 aa11.53□□□□□ -0.56
LINC01949-202ENST00000611331 CHD4Q14839 1912 aa11.53□□□□□ -0.56
LINC01949-202ENST00000611331 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
LINC01949-202ENST00000611331 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
LINC01949-202ENST00000611331 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
LINC01949-202ENST00000611331 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
LINC01949-202ENST00000611331 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
LINC01949-202ENST00000611331 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
LINC01949-202ENST00000611331 NRAPQ86VF7 1730 aa11.51□□□□□ -0.57
LINC01949-202ENST00000611331 NRKQ7Z2Y5 1582 aa11.5□□□□□ -0.57
LINC01949-202ENST00000611331 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
LINC01949-202ENST00000611331 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
LINC01949-202ENST00000611331 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.5□□□□□ -0.57
LINC01949-202ENST00000611331 UTRNP46939 3433 aa11.5□□□□□ -0.57
LINC01949-202ENST00000611331 THSD7AQ9UPZ6 1657 aa11.5□□□□□ -0.57
LINC01949-202ENST00000611331 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 FAM196AQ6ZSG2 479 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 NUTM2FA1L443 756 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 PRAG1Q86YV5 1406 aa11.49□□□□□ -0.57
LINC01949-202ENST00000611331 KRT28Q7Z3Y7 464 aa11.48□□□□□ -0.57
LINC01949-202ENST00000611331 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
LINC01949-202ENST00000611331 KIF1AQ12756 1690 aa11.47□□□□□ -0.57
LINC01949-202ENST00000611331 MYOM1P52179 1685 aa11.47□□□□□ -0.57
LINC01949-202ENST00000611331 NEXMIFQ5QGS0 1516 aa11.47□□□□□ -0.57
LINC01949-202ENST00000611331 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
LINC01949-202ENST00000611331 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
LINC01949-202ENST00000611331 NAIPQ13075 1403 aa11.46□□□□□ -0.58
LINC01949-202ENST00000611331 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.58
LINC01949-202ENST00000611331 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
LINC01949-202ENST00000611331 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
LINC01949-202ENST00000611331 PSME1Q06323 249 aa11.44□□□□□ -0.58
LINC01949-202ENST00000611331 COL14A1Q05707 1796 aaKnown RBP11.44□□□□□ -0.58
LINC01949-202ENST00000611331 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
LINC01949-202ENST00000611331 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01949-202ENST00000611331 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
LINC01949-202ENST00000611331 SYT17Q9BSW7 474 aa11.43□□□□□ -0.58
LINC01949-202ENST00000611331 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
LINC01949-202ENST00000611331 ARHGEF10O15013 1369 aa11.43□□□□□ -0.58
LINC01949-202ENST00000611331 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
LINC01949-202ENST00000611331 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
LINC01949-202ENST00000611331 PTGER2P43116 358 aa11.41□□□□□ -0.58
LINC01949-202ENST00000611331 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
LINC01949-202ENST00000611331 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
LINC01949-202ENST00000611331 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
LINC01949-202ENST00000611331 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
LINC01949-202ENST00000611331 PDE3BQ13370 1112 aa11.39□□□□□ -0.59
LINC01949-202ENST00000611331 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
LINC01949-202ENST00000611331 NUP155O75694 1391 aa11.39□□□□□ -0.59
LINC01949-202ENST00000611331 SPATA31A1Q5TZJ5 1347 aa11.39□□□□□ -0.59
LINC01949-202ENST00000611331 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
LINC01949-202ENST00000611331 PDGFDQ9GZP0 370 aaPredicted RBP11.38□□□□□ -0.59
LINC01949-202ENST00000611331 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
LINC01949-202ENST00000611331 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
LINC01949-202ENST00000611331 CLTCL1P53675 1640 aa11.37□□□□□ -0.59
LINC01949-202ENST00000611331 GPR162Q16538 588 aa11.37□□□□□ -0.59
LINC01949-202ENST00000611331 SHANK3Q9BYB0 1731 aa11.37□□□□□ -0.59
LINC01949-202ENST00000611331 WAPLQ7Z5K2 1190 aa11.36□□□□□ -0.59
LINC01949-202ENST00000611331 KIF1BO60333 1816 aa11.36□□□□□ -0.59
LINC01949-202ENST00000611331 HSPA6P17066 643 aa11.35□□□□□ -0.59
LINC01949-202ENST00000611331 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
LINC01949-202ENST00000611331 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
LINC01949-202ENST00000611331 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
LINC01949-202ENST00000611331 NRXN1Q9ULB1 1477 aa11.35□□□□□ -0.59
LINC01949-202ENST00000611331 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
LINC01949-202ENST00000611331 RGPD8O14715 1765 aaPredicted RBP11.35□□□□□ -0.59
LINC01949-202ENST00000611331 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
LINC01949-202ENST00000611331 PRDM11Q9NQV5 511 aa11.34□□□□□ -0.59
LINC01949-202ENST00000611331 STK26Q9P289 416 aa11.34□□□□□ -0.59
LINC01949-202ENST00000611331 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
LINC01949-202ENST00000611331 TECPR2O15040 1411 aa11.33□□□□□ -0.6
LINC01949-202ENST00000611331 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
LINC01949-202ENST00000611331 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
LINC01949-202ENST00000611331 PLSCR1O15162 318 aa11.32□□□□□ -0.6
LINC01949-202ENST00000611331 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
LINC01949-202ENST00000611331 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
LINC01949-202ENST00000611331 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms