RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
VPS36-207ENST00000611132 TESK2Q96S53 571 aa17.69■□□□□ 0.42
VPS36-207ENST00000611132 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
VPS36-207ENST00000611132 KLHL40Q2TBA0 621 aa17.69■□□□□ 0.42
VPS36-207ENST00000611132 LMOD2Q6P5Q4 547 aa17.69■□□□□ 0.42
VPS36-207ENST00000611132 SF3A1Q15459 793 aaKnown RBP17.68■□□□□ 0.42
VPS36-207ENST00000611132 BMP2KLQ5H9B9 411 aa17.68■□□□□ 0.42
VPS36-207ENST00000611132 SASS6Q6UVJ0 657 aa17.68■□□□□ 0.42
VPS36-207ENST00000611132 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
VPS36-207ENST00000611132 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
VPS36-207ENST00000611132 WDR33Q9C0J8 1336 aaKnown RBP17.68■□□□□ 0.42
VPS36-207ENST00000611132 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
VPS36-207ENST00000611132 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
VPS36-207ENST00000611132 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
VPS36-207ENST00000611132 FIBPO43427 364 aa17.66■□□□□ 0.42
VPS36-207ENST00000611132 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
VPS36-207ENST00000611132 CCDC27Q2M243 656 aa17.66■□□□□ 0.42
VPS36-207ENST00000611132 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
VPS36-207ENST00000611132 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
VPS36-207ENST00000611132 ARHGEF12Q9NZN5 1544 aa17.65■□□□□ 0.42
VPS36-207ENST00000611132 TSPYL4Q9UJ04 414 aa17.65■□□□□ 0.42
VPS36-207ENST00000611132 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
VPS36-207ENST00000611132 PZPP20742 1482 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 NECTIN2Q92692 538 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 SNX21Q969T3 373 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 INSRP06213 1382 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 GNAI3P08754 354 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 TBC1D9Q6ZT07 1266 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 TRIM5Q9C035 493 aa17.64■□□□□ 0.41
VPS36-207ENST00000611132 FCHSD2O94868 740 aa17.63■□□□□ 0.41
VPS36-207ENST00000611132 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
VPS36-207ENST00000611132 MCM5P33992 734 aa17.63■□□□□ 0.41
VPS36-207ENST00000611132 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
VPS36-207ENST00000611132 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
VPS36-207ENST00000611132 SPC24Q8NBT2 197 aa17.62■□□□□ 0.41
VPS36-207ENST00000611132 A0A0U1RQG5 324 aaPredicted RBP17.62■□□□□ 0.41
VPS36-207ENST00000611132 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
VPS36-207ENST00000611132 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
VPS36-207ENST00000611132 RLBP1P12271 317 aa17.62■□□□□ 0.41
VPS36-207ENST00000611132 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
VPS36-207ENST00000611132 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
VPS36-207ENST00000611132 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
VPS36-207ENST00000611132 TPD52L1Q16890 204 aaPredicted RBP17.61■□□□□ 0.41
VPS36-207ENST00000611132 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
VPS36-207ENST00000611132 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
VPS36-207ENST00000611132 GNAI2P04899 355 aa17.6■□□□□ 0.41
VPS36-207ENST00000611132 CCDC192P0DO97 292 aa17.6■□□□□ 0.41
VPS36-207ENST00000611132 PIK3C2GO75747 1445 aa17.6■□□□□ 0.41
VPS36-207ENST00000611132 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
VPS36-207ENST00000611132 TNNQ9UQP3 1299 aa17.6■□□□□ 0.41
VPS36-207ENST00000611132 KIF14Q15058 1648 aa17.6■□□□□ 0.41
VPS36-207ENST00000611132 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
VPS36-207ENST00000611132 NUCB1Q02818 461 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 SMC5Q8IY18 1101 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 CHMP4CQ96CF2 233 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 NUP160Q12769 1436 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
VPS36-207ENST00000611132 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
VPS36-207ENST00000611132 DYNC1I1O14576 645 aa17.58■□□□□ 0.41
VPS36-207ENST00000611132 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.41
VPS36-207ENST00000611132 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
VPS36-207ENST00000611132 RAB3GAP1Q15042 981 aa17.58■□□□□ 0.4
VPS36-207ENST00000611132 NFE2L2Q16236 605 aa17.58■□□□□ 0.4
VPS36-207ENST00000611132 GOLGA6L1Q8N7Z2 621 aa17.58■□□□□ 0.4
VPS36-207ENST00000611132 PDCP20941 246 aa17.58■□□□□ 0.4
VPS36-207ENST00000611132 ZSCAN23Q3MJ62 389 aa17.58■□□□□ 0.4
VPS36-207ENST00000611132 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
VPS36-207ENST00000611132 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
VPS36-207ENST00000611132 LRRCC1Q9C099 1032 aa17.57■□□□□ 0.4
VPS36-207ENST00000611132 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
VPS36-207ENST00000611132 CCDC34Q96HJ3 373 aa17.57■□□□□ 0.4
VPS36-207ENST00000611132 COL17A1Q9UMD9 1497 aaPredicted RBP17.57■□□□□ 0.4
VPS36-207ENST00000611132 BCL11BQ9C0K0 894 aaPredicted RBP17.57■□□□□ 0.4
VPS36-207ENST00000611132 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
VPS36-207ENST00000611132 PDCL2Q8N4E4 241 aa17.57■□□□□ 0.4
VPS36-207ENST00000611132 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
VPS36-207ENST00000611132 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
VPS36-207ENST00000611132 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
VPS36-207ENST00000611132 CCT4P50991 539 aaKnown RBP17.56■□□□□ 0.4
VPS36-207ENST00000611132 CCAR2Q8N163 923 aaKnown RBP17.56■□□□□ 0.4
VPS36-207ENST00000611132 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
VPS36-207ENST00000611132 OFD1O75665 1012 aa17.55■□□□□ 0.4
VPS36-207ENST00000611132 ARGLU1Q9NWB6 273 aaPredicted RBP17.55■□□□□ 0.4
VPS36-207ENST00000611132 CCDC112Q8NEF3 446 aa17.55■□□□□ 0.4
VPS36-207ENST00000611132 ADGRF5Q8IZF2 1346 aa17.55■□□□□ 0.4
VPS36-207ENST00000611132 CABP1Q9NZU7 370 aa17.54■□□□□ 0.4
VPS36-207ENST00000611132 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
VPS36-207ENST00000611132 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
VPS36-207ENST00000611132 NUP153P49790 1475 aaKnown RBP17.54■□□□□ 0.4
VPS36-207ENST00000611132 GCC2Q8IWJ2 1684 aa17.54■□□□□ 0.4
VPS36-207ENST00000611132 PSMA5P28066 241 aa17.54■□□□□ 0.4
VPS36-207ENST00000611132 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
VPS36-207ENST00000611132 GPS2Q13227 327 aa17.54■□□□□ 0.4
VPS36-207ENST00000611132 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
VPS36-207ENST00000611132 AEBP1Q8IUX7 1158 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms