RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
FDPS-220ENST00000611010 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
FDPS-220ENST00000611010 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
FDPS-220ENST00000611010 NRKQ7Z2Y5 1582 aa17.55■□□□□ 0.4
FDPS-220ENST00000611010 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
FDPS-220ENST00000611010 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
FDPS-220ENST00000611010 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
FDPS-220ENST00000611010 LMO7Q8WWI1 1683 aa17.53■□□□□ 0.4
FDPS-220ENST00000611010 HRCP23327 699 aa17.53■□□□□ 0.4
FDPS-220ENST00000611010 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
FDPS-220ENST00000611010 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
FDPS-220ENST00000611010 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
FDPS-220ENST00000611010 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
FDPS-220ENST00000611010 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.39
FDPS-220ENST00000611010 POGKQ9P215 609 aa17.51■□□□□ 0.39
FDPS-220ENST00000611010 A0A0G2JS52 829 aa17.5■□□□□ 0.39
FDPS-220ENST00000611010 BAG6P46379 1132 aa17.5■□□□□ 0.39
FDPS-220ENST00000611010 MYT1Q01538 1121 aa17.5■□□□□ 0.39
FDPS-220ENST00000611010 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
FDPS-220ENST00000611010 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
FDPS-220ENST00000611010 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
FDPS-220ENST00000611010 EIF3AQ14152 1382 aaKnown RBP17.48■□□□□ 0.39
FDPS-220ENST00000611010 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
FDPS-220ENST00000611010 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
FDPS-220ENST00000611010 KIAA1210Q9ULL0 1709 aa17.46■□□□□ 0.39
FDPS-220ENST00000611010 SPATA31A1Q5TZJ5 1347 aa17.46■□□□□ 0.38
FDPS-220ENST00000611010 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
FDPS-220ENST00000611010 WNK3Q9BYP7 1800 aa17.45■□□□□ 0.38
FDPS-220ENST00000611010 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
FDPS-220ENST00000611010 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
FDPS-220ENST00000611010 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
FDPS-220ENST00000611010 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
FDPS-220ENST00000611010 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
FDPS-220ENST00000611010 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
FDPS-220ENST00000611010 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
FDPS-220ENST00000611010 POLR3AO14802 1390 aaPredicted RBP17.42■□□□□ 0.38
FDPS-220ENST00000611010 LRRC37A3O60309 1634 aa17.41■□□□□ 0.38
FDPS-220ENST00000611010 NGDNQ8NEJ9 315 aaKnown RBP17.41■□□□□ 0.38
FDPS-220ENST00000611010 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
FDPS-220ENST00000611010 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
FDPS-220ENST00000611010 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
FDPS-220ENST00000611010 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
FDPS-220ENST00000611010 RGPD3A6NKT7 1758 aaPredicted RBP17.4■□□□□ 0.38
FDPS-220ENST00000611010 RGPD4Q7Z3J3 1758 aa17.4■□□□□ 0.38
FDPS-220ENST00000611010 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
FDPS-220ENST00000611010 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
FDPS-220ENST00000611010 TRIM37O94972 964 aa17.38■□□□□ 0.37
FDPS-220ENST00000611010 NUTM2GQ5VZR2 741 aa17.38■□□□□ 0.37
FDPS-220ENST00000611010 COL18A1P39060 1754 aa17.38■□□□□ 0.37
FDPS-220ENST00000611010 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
FDPS-220ENST00000611010 STRN4Q9NRL3 753 aa17.37■□□□□ 0.37
FDPS-220ENST00000611010 USP19O94966 1318 aa17.37■□□□□ 0.37
FDPS-220ENST00000611010 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
FDPS-220ENST00000611010 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
FDPS-220ENST00000611010 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
FDPS-220ENST00000611010 ACEP12821 1306 aa17.35■□□□□ 0.37
FDPS-220ENST00000611010 CPDO75976 1380 aa17.35■□□□□ 0.37
FDPS-220ENST00000611010 PARD3Q8TEW0 1356 aa17.35■□□□□ 0.37
FDPS-220ENST00000611010 SLIT3O75094 1523 aa17.35■□□□□ 0.37
FDPS-220ENST00000611010 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
FDPS-220ENST00000611010 RGPD5Q99666 1765 aa17.34■□□□□ 0.37
FDPS-220ENST00000611010 CDK19Q9BWU1 502 aa17.34■□□□□ 0.37
FDPS-220ENST00000611010 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.36
FDPS-220ENST00000611010 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
FDPS-220ENST00000611010 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
FDPS-220ENST00000611010 AKAP12Q02952 1782 aa17.33■□□□□ 0.36
FDPS-220ENST00000611010 APBA3O96018 575 aa17.31■□□□□ 0.36
FDPS-220ENST00000611010 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
FDPS-220ENST00000611010 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
FDPS-220ENST00000611010 PLEKHG3A1L390 1219 aa17.3■□□□□ 0.36
FDPS-220ENST00000611010 STAC3Q96MF2 364 aa17.28■□□□□ 0.36
FDPS-220ENST00000611010 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
FDPS-220ENST00000611010 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
FDPS-220ENST00000611010 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
FDPS-220ENST00000611010 CRB1P82279 1406 aa17.27■□□□□ 0.35
FDPS-220ENST00000611010 MYOM1P52179 1685 aa17.26■□□□□ 0.35
FDPS-220ENST00000611010 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
FDPS-220ENST00000611010 USP6P35125 1406 aa17.26■□□□□ 0.35
FDPS-220ENST00000611010 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
FDPS-220ENST00000611010 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
FDPS-220ENST00000611010 OVOS2A0A0J9YW53 1432 aa17.25■□□□□ 0.35
FDPS-220ENST00000611010 OVOS2Q6IE36 1432 aa17.25■□□□□ 0.35
FDPS-220ENST00000611010 GCP02774 474 aa17.24■□□□□ 0.35
FDPS-220ENST00000611010 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
FDPS-220ENST00000611010 EVA1CP58658 441 aa17.23■□□□□ 0.35
FDPS-220ENST00000611010 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
FDPS-220ENST00000611010 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
FDPS-220ENST00000611010 THRAP3Q9Y2W1 955 aaKnown RBP17.22■□□□□ 0.35
FDPS-220ENST00000611010 NFAT5O94916 1531 aa17.21■□□□□ 0.35
FDPS-220ENST00000611010 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
FDPS-220ENST00000611010 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
FDPS-220ENST00000611010 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
FDPS-220ENST00000611010 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
FDPS-220ENST00000611010 UTRNP46939 3433 aa17.2■□□□□ 0.34
FDPS-220ENST00000611010 CPSF1Q10570 1443 aaKnown RBP17.2■□□□□ 0.34
FDPS-220ENST00000611010 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
FDPS-220ENST00000611010 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
FDPS-220ENST00000611010 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
FDPS-220ENST00000611010 NHSQ6T4R5 1651 aa17.19■□□□□ 0.34
FDPS-220ENST00000611010 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms