RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 ABCC11Q96J66 1382 aa22.83■■□□□ 1.25
TNIP1-221ENST00000610874 SETD1AO15047 1707 aaKnown RBP22.83■■□□□ 1.25
TNIP1-221ENST00000610874 FRAT2O75474 233 aaPredicted RBP22.83■■□□□ 1.25
TNIP1-221ENST00000610874 CD163L1Q9NR16 1453 aa22.83■■□□□ 1.24
TNIP1-221ENST00000610874 HDGFL2Q7Z4V5 671 aaPredicted RBP22.82■■□□□ 1.24
TNIP1-221ENST00000610874 CANXP27824 592 aaKnown RBP22.82■■□□□ 1.24
TNIP1-221ENST00000610874 UBR1Q8IWV7 1749 aa22.8■■□□□ 1.24
TNIP1-221ENST00000610874 WASLO00401 505 aaPredicted RBP22.79■■□□□ 1.24
TNIP1-221ENST00000610874 PANK1Q8TE04 598 aa22.78■■□□□ 1.24
TNIP1-221ENST00000610874 COG6Q9Y2V7 657 aa22.78■■□□□ 1.24
TNIP1-221ENST00000610874 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
TNIP1-221ENST00000610874 NINLQ9Y2I6 1382 aa22.78■■□□□ 1.24
TNIP1-221ENST00000610874 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
TNIP1-221ENST00000610874 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
TNIP1-221ENST00000610874 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
TNIP1-221ENST00000610874 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
TNIP1-221ENST00000610874 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
TNIP1-221ENST00000610874 CLUAP1Q96AJ1 413 aa22.75■■□□□ 1.23
TNIP1-221ENST00000610874 NUDT16Q96DE0 195 aaKnown RBP22.75■■□□□ 1.23
TNIP1-221ENST00000610874 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
TNIP1-221ENST00000610874 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
TNIP1-221ENST00000610874 DLC1Q96QB1 1528 aa22.75■■□□□ 1.23
TNIP1-221ENST00000610874 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
TNIP1-221ENST00000610874 NSD2O96028 1365 aa22.74■■□□□ 1.23
TNIP1-221ENST00000610874 C3P01024 1663 aa22.74■■□□□ 1.23
TNIP1-221ENST00000610874 PDE3AQ14432 1141 aa22.74■■□□□ 1.23
TNIP1-221ENST00000610874 WWC1Q8IX03 1113 aa22.74■■□□□ 1.23
TNIP1-221ENST00000610874 SEC24BO95487 1268 aa22.73■■□□□ 1.23
TNIP1-221ENST00000610874 TCP11L2Q8N4U5 519 aa22.73■■□□□ 1.23
TNIP1-221ENST00000610874 USP19O94966 1318 aa22.72■■□□□ 1.23
TNIP1-221ENST00000610874 SHPRHQ149N8 1683 aa22.72■■□□□ 1.23
TNIP1-221ENST00000610874 PPIP5K1Q6PFW1 1433 aa22.72■■□□□ 1.23
TNIP1-221ENST00000610874 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.72■■□□□ 1.23
TNIP1-221ENST00000610874 NME9Q86XW9 330 aa22.71■■□□□ 1.23
TNIP1-221ENST00000610874 RUNDC1Q96C34 613 aa22.71■■□□□ 1.23
TNIP1-221ENST00000610874 FER1L4A9Z1Z3 1794 aa22.71■■□□□ 1.23
TNIP1-221ENST00000610874 NLRP1Q9C000 1473 aa22.7■■□□□ 1.22
TNIP1-221ENST00000610874 VIRMAQ69YN4 1812 aaKnown RBP22.7■■□□□ 1.22
TNIP1-221ENST00000610874 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
TNIP1-221ENST00000610874 NGEFQ8N5V2 710 aa22.69■■□□□ 1.22
TNIP1-221ENST00000610874 PRR36Q9H6K5 1346 aa22.69■■□□□ 1.22
TNIP1-221ENST00000610874 PLEKHG1Q9ULL1 1385 aa22.68■■□□□ 1.22
TNIP1-221ENST00000610874 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
TNIP1-221ENST00000610874 CCDC61Q9Y6R9 512 aa22.68■■□□□ 1.22
TNIP1-221ENST00000610874 THEMISQ8N1K5 641 aaPredicted RBP22.66■■□□□ 1.22
TNIP1-221ENST00000610874 BCL2L13Q9BXK5 485 aa22.66■■□□□ 1.22
TNIP1-221ENST00000610874 PTPRUQ92729 1446 aa22.66■■□□□ 1.22
TNIP1-221ENST00000610874 SLKQ9H2G2 1235 aaPredicted RBP22.66■■□□□ 1.22
TNIP1-221ENST00000610874 TNNQ9UQP3 1299 aa22.65■■□□□ 1.22
TNIP1-221ENST00000610874 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
TNIP1-221ENST00000610874 TECPR2O15040 1411 aa22.64■■□□□ 1.21
TNIP1-221ENST00000610874 RARSP54136 660 aaKnown RBP22.63■■□□□ 1.21
TNIP1-221ENST00000610874 BECN1Q14457 450 aa22.63■■□□□ 1.21
TNIP1-221ENST00000610874 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
TNIP1-221ENST00000610874 RLBP1P12271 317 aa22.62■■□□□ 1.21
TNIP1-221ENST00000610874 POLKQ9UBT6 870 aa22.62■■□□□ 1.21
TNIP1-221ENST00000610874 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
TNIP1-221ENST00000610874 ATP7BP35670 1465 aa22.61■■□□□ 1.21
TNIP1-221ENST00000610874 PCDHB15Q9Y5E8 787 aa22.61■■□□□ 1.21
TNIP1-221ENST00000610874 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
TNIP1-221ENST00000610874 RRS1Q15050 365 aaKnown RBP22.6■■□□□ 1.21
TNIP1-221ENST00000610874 RBM33Q96EV2 1170 aaKnown RBP22.6■■□□□ 1.21
TNIP1-221ENST00000610874 CPS1P31327 1500 aa22.6■■□□□ 1.21
TNIP1-221ENST00000610874 CPSF1Q10570 1443 aaKnown RBP22.6■■□□□ 1.21
TNIP1-221ENST00000610874 PMFBP1Q8TBY8 1022 aa22.6■■□□□ 1.21
TNIP1-221ENST00000610874 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.59■■□□□ 1.21
TNIP1-221ENST00000610874 SOX12O15370 315 aa22.58■■□□□ 1.21
TNIP1-221ENST00000610874 UPF2Q9HAU5 1272 aaKnown RBP22.57■■□□□ 1.2
TNIP1-221ENST00000610874 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
TNIP1-221ENST00000610874 PDZRN3Q9UPQ7 1066 aa22.57■■□□□ 1.2
TNIP1-221ENST00000610874 TBX22Q9Y458 520 aa22.57■■□□□ 1.2
TNIP1-221ENST00000610874 ACEP12821 1306 aa22.57■■□□□ 1.2
TNIP1-221ENST00000610874 KIF20BQ96Q89 1820 aa22.56■■□□□ 1.2
TNIP1-221ENST00000610874 HMOX1P09601 288 aa22.56■■□□□ 1.2
TNIP1-221ENST00000610874 EDC4Q6P2E9 1401 aaKnown RBP22.56■■□□□ 1.2
TNIP1-221ENST00000610874 MED14O60244 1454 aa22.56■■□□□ 1.2
TNIP1-221ENST00000610874 COL3A1P02461 1466 aaPredicted RBP22.56■■□□□ 1.2
TNIP1-221ENST00000610874 IQSEC2Q5JU85 1478 aa22.56■■□□□ 1.2
TNIP1-221ENST00000610874 PLEKHF1Q96S99 279 aa22.56■■□□□ 1.2
TNIP1-221ENST00000610874 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
TNIP1-221ENST00000610874 KCNA6P17658 529 aa22.55■■□□□ 1.2
TNIP1-221ENST00000610874 COG3Q96JB2 828 aa22.55■■□□□ 1.2
TNIP1-221ENST00000610874 SLIT1O75093 1534 aa22.55■■□□□ 1.2
TNIP1-221ENST00000610874 RIMS1Q86UR5 1692 aaKnown RBP22.54■■□□□ 1.2
TNIP1-221ENST00000610874 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
TNIP1-221ENST00000610874 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
TNIP1-221ENST00000610874 WDR63Q8IWG1 891 aa22.52■■□□□ 1.2
TNIP1-221ENST00000610874 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
TNIP1-221ENST00000610874 TMPOP42166 694 aaKnown RBP22.52■■□□□ 1.2
TNIP1-221ENST00000610874 TSR2Q969E8 191 aaKnown RBP22.52■■□□□ 1.2
TNIP1-221ENST00000610874 TBC1D32Q96NH3 1257 aa22.51■■□□□ 1.19
TNIP1-221ENST00000610874 CDC42BPGQ6DT37 1551 aa22.51■■□□□ 1.19
TNIP1-221ENST00000610874 PNPLA6Q8IY17 1366 aa22.51■■□□□ 1.19
TNIP1-221ENST00000610874 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
TNIP1-221ENST00000610874 ZNF692Q9BU19 519 aaPredicted RBP22.5■■□□□ 1.19
TNIP1-221ENST00000610874 RWDD1Q9H446 243 aaPredicted RBP22.5■■□□□ 1.19
TNIP1-221ENST00000610874 PRKAR2BP31323 418 aa22.5■■□□□ 1.19
TNIP1-221ENST00000610874 RIPK4P57078 832 aa22.49■■□□□ 1.19
TNIP1-221ENST00000610874 SPRYD3Q8NCJ5 442 aa22.49■■□□□ 1.19
TNIP1-221ENST00000610874 TBC1D2Q9BYX2 928 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms