RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
EWSR1-221ENST00000610553 TRIM27P14373 513 aa21.67■■□□□ 1.06
EWSR1-221ENST00000610553 HDAC1Q13547 482 aaPredicted RBP21.67■■□□□ 1.06
EWSR1-221ENST00000610553 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
EWSR1-221ENST00000610553 TRIM35Q9UPQ4 493 aa21.66■■□□□ 1.06
EWSR1-221ENST00000610553 TMPOP42166 694 aaKnown RBP21.65■■□□□ 1.06
EWSR1-221ENST00000610553 EXOSC9Q06265 439 aaKnown RBP21.65■■□□□ 1.06
EWSR1-221ENST00000610553 MED14O60244 1454 aa21.64■■□□□ 1.05
EWSR1-221ENST00000610553 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
EWSR1-221ENST00000610553 SSH1Q8WYL5 1049 aa21.63■■□□□ 1.05
EWSR1-221ENST00000610553 DDX19BQ9UMR2 479 aa21.63■■□□□ 1.05
EWSR1-221ENST00000610553 ZFYVE9O95405 1425 aa21.63■■□□□ 1.05
EWSR1-221ENST00000610553 IL16Q14005 1332 aa21.63■■□□□ 1.05
EWSR1-221ENST00000610553 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
EWSR1-221ENST00000610553 CLTCQ00610 1675 aaKnown RBP21.61■■□□□ 1.05
EWSR1-221ENST00000610553 FAM43AQ8N2R8 423 aa21.61■■□□□ 1.05
EWSR1-221ENST00000610553 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
EWSR1-221ENST00000610553 ARHGAP31Q2M1Z3 1444 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 PTPRMP28827 1452 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 CD163L1Q9NR16 1453 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 SMC5Q8IY18 1101 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 C22orf23Q9BZE7 217 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 ITPRIPQ8IWB1 547 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 GGNBP2Q9H3C7 697 aa21.6■■□□□ 1.05
EWSR1-221ENST00000610553 ATAD2Q6PL18 1390 aa21.59■■□□□ 1.05
EWSR1-221ENST00000610553 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.05
EWSR1-221ENST00000610553 MFAP1P55081 439 aaKnown RBP21.57■■□□□ 1.04
EWSR1-221ENST00000610553 NOB1Q9ULX3 412 aaKnown RBP21.57■■□□□ 1.04
EWSR1-221ENST00000610553 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
EWSR1-221ENST00000610553 PNPLA6Q8IY17 1366 aa21.57■■□□□ 1.04
EWSR1-221ENST00000610553 FYB1O15117 783 aa21.56■■□□□ 1.04
EWSR1-221ENST00000610553 SRPK2P78362 688 aaKnown RBP21.56■■□□□ 1.04
EWSR1-221ENST00000610553 L1TD1Q5T7N2 865 aaKnown RBP21.56■■□□□ 1.04
EWSR1-221ENST00000610553 ZBTB40Q9NUA8 1239 aa21.56■■□□□ 1.04
EWSR1-221ENST00000610553 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.56■■□□□ 1.04
EWSR1-221ENST00000610553 KIF16BQ96L93 1317 aa21.56■■□□□ 1.04
EWSR1-221ENST00000610553 MYO5BQ9ULV0 1848 aa21.56■■□□□ 1.04
EWSR1-221ENST00000610553 CDC42BPGQ6DT37 1551 aa21.56■■□□□ 1.04
EWSR1-221ENST00000610553 TMEM57Q8N5G2 664 aa21.56■■□□□ 1.04
EWSR1-221ENST00000610553 IDI1Q13907 227 aa21.54■■□□□ 1.04
EWSR1-221ENST00000610553 MCM4P33991 863 aa21.54■■□□□ 1.04
EWSR1-221ENST00000610553 RIPK4P57078 832 aa21.54■■□□□ 1.04
EWSR1-221ENST00000610553 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
EWSR1-221ENST00000610553 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
EWSR1-221ENST00000610553 CHMP5Q9NZZ3 219 aa21.52■■□□□ 1.04
EWSR1-221ENST00000610553 KIF20BQ96Q89 1820 aa21.52■■□□□ 1.04
EWSR1-221ENST00000610553 TMEM131LA2VDJ0 1609 aa21.52■■□□□ 1.04
EWSR1-221ENST00000610553 STK26Q9P289 416 aa21.52■■□□□ 1.04
EWSR1-221ENST00000610553 SPRYD3Q8NCJ5 442 aa21.51■■□□□ 1.03
EWSR1-221ENST00000610553 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
EWSR1-221ENST00000610553 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
EWSR1-221ENST00000610553 ALDH1L2Q3SY69 923 aa21.51■■□□□ 1.03
EWSR1-221ENST00000610553 SLC52A1Q9NWF4 448 aa21.51■■□□□ 1.03
EWSR1-221ENST00000610553 IPO8O15397 1037 aaKnown RBP21.5■■□□□ 1.03
EWSR1-221ENST00000610553 NUCB1Q02818 461 aa21.5■■□□□ 1.03
EWSR1-221ENST00000610553 YTHDC2Q9H6S0 1430 aaKnown RBP21.5■■□□□ 1.03
EWSR1-221ENST00000610553 FSD2A1L4K1 749 aa21.49■■□□□ 1.03
EWSR1-221ENST00000610553 PNNQ9H307 717 aaKnown RBP21.49■■□□□ 1.03
EWSR1-221ENST00000610553 PPIP5K1Q6PFW1 1433 aa21.49■■□□□ 1.03
EWSR1-221ENST00000610553 PREX1Q8TCU6 1659 aa21.49■■□□□ 1.03
EWSR1-221ENST00000610553 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
EWSR1-221ENST00000610553 ZNF692Q9BU19 519 aaPredicted RBP21.49■■□□□ 1.03
EWSR1-221ENST00000610553 RBM25P49756 843 aaKnown RBP21.48■■□□□ 1.03
EWSR1-221ENST00000610553 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
EWSR1-221ENST00000610553 FAM135BQ49AJ0 1406 aa21.48■■□□□ 1.03
EWSR1-221ENST00000610553 BRPF1P55201 1214 aaPredicted RBP21.47■■□□□ 1.03
EWSR1-221ENST00000610553 ARHGEF40Q8TER5 1519 aa21.47■■□□□ 1.03
EWSR1-221ENST00000610553 HSCBQ8IWL3 235 aa21.47■■□□□ 1.03
EWSR1-221ENST00000610553 FCHSD2O94868 740 aa21.45■■□□□ 1.02
EWSR1-221ENST00000610553 ZNF428Q96B54 188 aa21.45■■□□□ 1.02
EWSR1-221ENST00000610553 DDIT3P35638 169 aa21.45■■□□□ 1.02
EWSR1-221ENST00000610553 GOLGA6L3A6NEY3 463 aa21.44■■□□□ 1.02
EWSR1-221ENST00000610553 HDGFL2Q7Z4V5 671 aaPredicted RBP21.44■■□□□ 1.02
EWSR1-221ENST00000610553 XRCC6P12956 609 aaKnown RBP eCLIP21.44■■□□□ 1.02
EWSR1-221ENST00000610553 CHD1LQ86WJ1 897 aa21.44■■□□□ 1.02
EWSR1-221ENST00000610553 LNPKQ9C0E8 428 aa21.44■■□□□ 1.02
EWSR1-221ENST00000610553 RSPH6AQ9H0K4 717 aa21.44■■□□□ 1.02
EWSR1-221ENST00000610553 SNX21Q969T3 373 aa21.43■■□□□ 1.02
EWSR1-221ENST00000610553 PIK3R4Q99570 1358 aa21.43■■□□□ 1.02
EWSR1-221ENST00000610553 ALKQ9UM73 1620 aa21.43■■□□□ 1.02
EWSR1-221ENST00000610553 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
EWSR1-221ENST00000610553 BMP2KLQ5H9B9 411 aa21.42■■□□□ 1.02
EWSR1-221ENST00000610553 TRAK2O60296 914 aa21.41■■□□□ 1.02
EWSR1-221ENST00000610553 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
EWSR1-221ENST00000610553 RRAGDQ9NQL2 400 aaPredicted RBP21.41■■□□□ 1.02
EWSR1-221ENST00000610553 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
EWSR1-221ENST00000610553 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
EWSR1-221ENST00000610553 DDX11L8A8MPP1 907 aa21.39■■□□□ 1.02
EWSR1-221ENST00000610553 GZF1Q9H116 711 aaPredicted RBP21.39■■□□□ 1.02
EWSR1-221ENST00000610553 CABP1Q9NZU7 370 aa21.39■■□□□ 1.02
EWSR1-221ENST00000610553 ATP7BP35670 1465 aa21.39■■□□□ 1.01
EWSR1-221ENST00000610553 ZBTB7BO15156 539 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-221ENST00000610553 PRKCSHP14314 528 aaPredicted RBP21.38■■□□□ 1.01
EWSR1-221ENST00000610553 ARHGAP45Q92619 1136 aa21.38■■□□□ 1.01
EWSR1-221ENST00000610553 POLKQ9UBT6 870 aa21.38■■□□□ 1.01
EWSR1-221ENST00000610553 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
EWSR1-221ENST00000610553 VAMP4O75379 141 aa21.36■■□□□ 1.01
EWSR1-221ENST00000610553 NFE2L2Q16236 605 aa21.36■■□□□ 1.01
EWSR1-221ENST00000610553 MRPL50Q8N5N7 158 aaKnown RBP21.36■■□□□ 1.01
EWSR1-221ENST00000610553 ARXQ96QS3 562 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms