RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
SNX20-205ENST00000610485 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
SNX20-205ENST00000610485 CRYBG1Q9Y4K1 1723 aa18.45■□□□□ 0.54
SNX20-205ENST00000610485 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
SNX20-205ENST00000610485 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
SNX20-205ENST00000610485 GJD4Q96KN9 370 aaPredicted RBP18.44■□□□□ 0.54
SNX20-205ENST00000610485 CABP2Q9NPB3 220 aa18.44■□□□□ 0.54
SNX20-205ENST00000610485 PLCH1Q4KWH8 1693 aa18.44■□□□□ 0.54
SNX20-205ENST00000610485 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
SNX20-205ENST00000610485 GLI3P10071 1580 aa18.42■□□□□ 0.54
SNX20-205ENST00000610485 RALGAPBQ86X10 1494 aa18.42■□□□□ 0.54
SNX20-205ENST00000610485 FAM83GA6ND36 823 aa18.42■□□□□ 0.54
SNX20-205ENST00000610485 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
SNX20-205ENST00000610485 VPS72Q15906 364 aa18.4■□□□□ 0.54
SNX20-205ENST00000610485 COL14A1Q05707 1796 aaKnown RBP18.39■□□□□ 0.53
SNX20-205ENST00000610485 PHRF1Q9P1Y6 1649 aaKnown RBP18.38■□□□□ 0.53
SNX20-205ENST00000610485 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
SNX20-205ENST00000610485 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
SNX20-205ENST00000610485 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
SNX20-205ENST00000610485 SBNO2Q9Y2G9 1366 aa18.38■□□□□ 0.53
SNX20-205ENST00000610485 CARD11Q9BXL7 1154 aa18.37■□□□□ 0.53
SNX20-205ENST00000610485 CABP1Q9NZU7 370 aa18.37■□□□□ 0.53
SNX20-205ENST00000610485 USP6P35125 1406 aa18.35■□□□□ 0.53
SNX20-205ENST00000610485 BTG4Q9NY30 223 aa18.35■□□□□ 0.53
SNX20-205ENST00000610485 SSH2Q76I76 1423 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 USP19O94966 1318 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 NUTM2GQ5VZR2 741 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 ABTB2Q8N961 1025 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 PRDM11Q9NQV5 511 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 NRKQ7Z2Y5 1582 aa18.34■□□□□ 0.53
SNX20-205ENST00000610485 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
SNX20-205ENST00000610485 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
SNX20-205ENST00000610485 CPDO75976 1380 aa18.3■□□□□ 0.52
SNX20-205ENST00000610485 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
SNX20-205ENST00000610485 SEPT12Q8IYM1 358 aa18.3■□□□□ 0.52
SNX20-205ENST00000610485 ZC3H6P61129 1189 aaKnown RBP18.29■□□□□ 0.52
SNX20-205ENST00000610485 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
SNX20-205ENST00000610485 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
SNX20-205ENST00000610485 ZNF692Q9BU19 519 aaPredicted RBP18.28■□□□□ 0.52
SNX20-205ENST00000610485 SLIT3O75094 1523 aa18.28■□□□□ 0.52
SNX20-205ENST00000610485 SPATA31A5Q5VU36 1347 aa18.27■□□□□ 0.52
SNX20-205ENST00000610485 SPATA31A7Q8IWB4 1347 aa18.27■□□□□ 0.52
SNX20-205ENST00000610485 GCP02774 474 aa18.27■□□□□ 0.52
SNX20-205ENST00000610485 PIK3C2AO00443 1686 aa18.27■□□□□ 0.52
SNX20-205ENST00000610485 LMO7Q8WWI1 1683 aa18.26■□□□□ 0.51
SNX20-205ENST00000610485 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
SNX20-205ENST00000610485 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
SNX20-205ENST00000610485 NLRP6P59044 892 aa18.25■□□□□ 0.51
SNX20-205ENST00000610485 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
SNX20-205ENST00000610485 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
SNX20-205ENST00000610485 BRWD3Q6RI45 1802 aa18.24■□□□□ 0.51
SNX20-205ENST00000610485 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
SNX20-205ENST00000610485 CAMTA1Q9Y6Y1 1673 aa18.24■□□□□ 0.51
SNX20-205ENST00000610485 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 EP400Q96L91 3159 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 THSD7AQ9UPZ6 1657 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 CD163L1Q9NR16 1453 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
SNX20-205ENST00000610485 KRT27Q7Z3Y8 459 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 PUS7Q96PZ0 661 aaKnown RBP18.23■□□□□ 0.51
SNX20-205ENST00000610485 TESK2Q96S53 571 aa18.23■□□□□ 0.51
SNX20-205ENST00000610485 MON2Q7Z3U7 1717 aa18.22■□□□□ 0.51
SNX20-205ENST00000610485 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
SNX20-205ENST00000610485 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
SNX20-205ENST00000610485 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
SNX20-205ENST00000610485 BLMP54132 1417 aaPredicted RBP18.21■□□□□ 0.51
SNX20-205ENST00000610485 AATKQ6ZMQ8 1374 aa18.2■□□□□ 0.5
SNX20-205ENST00000610485 A0A0G2JS52 829 aa18.2■□□□□ 0.5
SNX20-205ENST00000610485 MYT1Q01538 1121 aa18.2■□□□□ 0.5
SNX20-205ENST00000610485 COL5A2P05997 1499 aaPredicted RBP18.2■□□□□ 0.5
SNX20-205ENST00000610485 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
SNX20-205ENST00000610485 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
SNX20-205ENST00000610485 EVA1CP58658 441 aa18.18■□□□□ 0.5
SNX20-205ENST00000610485 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
SNX20-205ENST00000610485 USP47Q96K76 1375 aa18.17■□□□□ 0.5
SNX20-205ENST00000610485 KCNH5Q8NCM2 988 aa18.17■□□□□ 0.5
SNX20-205ENST00000610485 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
SNX20-205ENST00000610485 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
SNX20-205ENST00000610485 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
SNX20-205ENST00000610485 NINLQ9Y2I6 1382 aa18.17■□□□□ 0.5
SNX20-205ENST00000610485 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
SNX20-205ENST00000610485 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
SNX20-205ENST00000610485 NFAT5O94916 1531 aa18.16■□□□□ 0.5
SNX20-205ENST00000610485 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
SNX20-205ENST00000610485 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
SNX20-205ENST00000610485 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
SNX20-205ENST00000610485 ARHGEF25Q86VW2 580 aa18.15■□□□□ 0.5
SNX20-205ENST00000610485 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
SNX20-205ENST00000610485 COL18A1P39060 1754 aa18.14■□□□□ 0.5
SNX20-205ENST00000610485 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
SNX20-205ENST00000610485 CRB1P82279 1406 aa18.14■□□□□ 0.49
SNX20-205ENST00000610485 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
SNX20-205ENST00000610485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNX20-205ENST00000610485 TCP11L2Q8N4U5 519 aa18.13■□□□□ 0.49
SNX20-205ENST00000610485 USP35Q9P2H5 1018 aa18.13■□□□□ 0.49
SNX20-205ENST00000610485 NME9Q86XW9 330 aa18.12■□□□□ 0.49
SNX20-205ENST00000610485 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
SNX20-205ENST00000610485 AXIN2Q9Y2T1 843 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms