RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 TOPAZ1Q8N9V7 1692 aa24.91■■□□□ 1.58
PRKN-208ENST00000610470 PLEKHG3A1L390 1219 aa24.91■■□□□ 1.58
PRKN-208ENST00000610470 SRPK2P78362 688 aaKnown RBP24.91■■□□□ 1.58
PRKN-208ENST00000610470 GLI3P10071 1580 aa24.91■■□□□ 1.58
PRKN-208ENST00000610470 ACEP12821 1306 aa24.9■■□□□ 1.58
PRKN-208ENST00000610470 NBPF8Q3BBV2 869 aa24.89■■□□□ 1.58
PRKN-208ENST00000610470 CCDC9Q9Y3X0 531 aaKnown RBP24.89■■□□□ 1.58
PRKN-208ENST00000610470 TRPM1Q7Z4N2 1603 aa24.88■■□□□ 1.57
PRKN-208ENST00000610470 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
PRKN-208ENST00000610470 QRICH2Q9H0J4 1663 aa24.87■■□□□ 1.57
PRKN-208ENST00000610470 CABP2Q9NPB3 220 aa24.86■■□□□ 1.57
PRKN-208ENST00000610470 BTG4Q9NY30 223 aa24.86■■□□□ 1.57
PRKN-208ENST00000610470 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
PRKN-208ENST00000610470 PPIP5K1Q6PFW1 1433 aa24.85■■□□□ 1.57
PRKN-208ENST00000610470 CRYBG1Q9Y4K1 1723 aa24.84■■□□□ 1.57
PRKN-208ENST00000610470 PRDM11Q9NQV5 511 aa24.83■■□□□ 1.57
PRKN-208ENST00000610470 SEPT12Q8IYM1 358 aa24.82■■□□□ 1.56
PRKN-208ENST00000610470 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
PRKN-208ENST00000610470 NRAPQ86VF7 1730 aa24.81■■□□□ 1.56
PRKN-208ENST00000610470 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
PRKN-208ENST00000610470 CCDC125Q86Z20 511 aa24.81■■□□□ 1.56
PRKN-208ENST00000610470 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
PRKN-208ENST00000610470 NUTM2GQ5VZR2 741 aa24.8■■□□□ 1.56
PRKN-208ENST00000610470 ABTB2Q8N961 1025 aa24.8■■□□□ 1.56
PRKN-208ENST00000610470 EP400Q96L91 3159 aa24.79■■□□□ 1.56
PRKN-208ENST00000610470 BRD4O60885 1362 aaPredicted RBP24.79■■□□□ 1.56
PRKN-208ENST00000610470 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
PRKN-208ENST00000610470 PHRF1Q9P1Y6 1649 aaKnown RBP24.79■■□□□ 1.56
PRKN-208ENST00000610470 CABP1Q9NZU7 370 aa24.77■■□□□ 1.56
PRKN-208ENST00000610470 TONSLQ96HA7 1378 aa24.77■■□□□ 1.56
PRKN-208ENST00000610470 A0A0G2JS52 829 aa24.75■■□□□ 1.55
PRKN-208ENST00000610470 ZC3H6P61129 1189 aaKnown RBP24.75■■□□□ 1.55
PRKN-208ENST00000610470 MYT1Q01538 1121 aa24.75■■□□□ 1.55
PRKN-208ENST00000610470 BRWD3Q6RI45 1802 aa24.75■■□□□ 1.55
PRKN-208ENST00000610470 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
PRKN-208ENST00000610470 KRT27Q7Z3Y8 459 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 NLRP13Q86W25 1043 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 SPATA31A5Q5VU36 1347 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 SPATA31A7Q8IWB4 1347 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 USP19O94966 1318 aa24.73■■□□□ 1.55
PRKN-208ENST00000610470 CHRNA2Q15822 529 aa24.73■■□□□ 1.55
PRKN-208ENST00000610470 USP6P35125 1406 aa24.72■■□□□ 1.55
PRKN-208ENST00000610470 BLMP54132 1417 aaPredicted RBP24.71■■□□□ 1.55
PRKN-208ENST00000610470 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
PRKN-208ENST00000610470 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
PRKN-208ENST00000610470 CPDO75976 1380 aa24.69■■□□□ 1.54
PRKN-208ENST00000610470 STRN4Q9NRL3 753 aa24.69■■□□□ 1.54
PRKN-208ENST00000610470 GCP02774 474 aa24.68■■□□□ 1.54
PRKN-208ENST00000610470 ZNF692Q9BU19 519 aaPredicted RBP24.68■■□□□ 1.54
PRKN-208ENST00000610470 SBNO2Q9Y2G9 1366 aa24.67■■□□□ 1.54
PRKN-208ENST00000610470 EVA1CP58658 441 aa24.67■■□□□ 1.54
PRKN-208ENST00000610470 SF3B2Q13435 895 aaKnown RBP24.67■■□□□ 1.54
PRKN-208ENST00000610470 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
PRKN-208ENST00000610470 NLRP6P59044 892 aa24.66■■□□□ 1.54
PRKN-208ENST00000610470 SSH2Q76I76 1423 aa24.65■■□□□ 1.54
PRKN-208ENST00000610470 ZRANB1Q9UGI0 708 aa24.62■■□□□ 1.53
PRKN-208ENST00000610470 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
PRKN-208ENST00000610470 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
PRKN-208ENST00000610470 SLIT3O75094 1523 aa24.61■■□□□ 1.53
PRKN-208ENST00000610470 TTC21BQ7Z4L5 1316 aa24.61■■□□□ 1.53
PRKN-208ENST00000610470 LMO7Q8WWI1 1683 aa24.6■■□□□ 1.53
PRKN-208ENST00000610470 USP35Q9P2H5 1018 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 CPSF1Q10570 1443 aaKnown RBP24.59■■□□□ 1.53
PRKN-208ENST00000610470 PIK3C2AO00443 1686 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 TTC21AQ8NDW8 1320 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.53
PRKN-208ENST00000610470 BARGINQ6ZT62 677 aa24.58■■□□□ 1.53
PRKN-208ENST00000610470 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
PRKN-208ENST00000610470 KTN1Q86UP2 1357 aaKnown RBP24.57■■□□□ 1.52
PRKN-208ENST00000610470 ZBTB7CA1YPR0 619 aa24.57■■□□□ 1.52
PRKN-208ENST00000610470 TCP11L2Q8N4U5 519 aa24.56■■□□□ 1.52
PRKN-208ENST00000610470 AATKQ6ZMQ8 1374 aa24.55■■□□□ 1.52
PRKN-208ENST00000610470 KCNH5Q8NCM2 988 aa24.55■■□□□ 1.52
PRKN-208ENST00000610470 THRAP3Q9Y2W1 955 aaKnown RBP24.55■■□□□ 1.52
PRKN-208ENST00000610470 COL5A2P05997 1499 aaPredicted RBP24.55■■□□□ 1.52
PRKN-208ENST00000610470 BAG6P46379 1132 aa24.54■■□□□ 1.52
PRKN-208ENST00000610470 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
PRKN-208ENST00000610470 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
PRKN-208ENST00000610470 PUS7Q96PZ0 661 aaKnown RBP24.52■■□□□ 1.52
PRKN-208ENST00000610470 HDGFL2Q7Z4V5 671 aaPredicted RBP24.51■■□□□ 1.51
PRKN-208ENST00000610470 CRB1P82279 1406 aa24.51■■□□□ 1.51
PRKN-208ENST00000610470 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 SLC24A1O60721 1099 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 FAM196AQ6ZSG2 479 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 RGPD1P0DJD0 1748 aa24.49■■□□□ 1.51
PRKN-208ENST00000610470 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
PRKN-208ENST00000610470 CD163L1Q9NR16 1453 aa24.48■■□□□ 1.51
PRKN-208ENST00000610470 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 SOX12O15370 315 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.47■■□□□ 1.51
PRKN-208ENST00000610470 SLC12A5Q9H2X9 1139 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 TERF2IPQ9NYB0 399 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 TOM1L2Q6ZVM7 507 aa24.46■■□□□ 1.51
PRKN-208ENST00000610470 TESK2Q96S53 571 aa24.46■■□□□ 1.51
PRKN-208ENST00000610470 COL18A1P39060 1754 aa24.46■■□□□ 1.51
PRKN-208ENST00000610470 USP31Q70CQ4 1352 aa24.45■■□□□ 1.5
PRKN-208ENST00000610470 AXIN2Q9Y2T1 843 aa24.45■■□□□ 1.5
PRKN-208ENST00000610470 WDR17Q8IZU2 1322 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms