RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 PSME1Q06323 249 aa10.94□□□□□ -0.66
COL25A1-208ENST00000610288 HSP90B2PQ58FF3 399 aa10.94□□□□□ -0.66
COL25A1-208ENST00000610288 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
COL25A1-208ENST00000610288 TSPYL4Q9UJ04 414 aa10.94□□□□□ -0.66
COL25A1-208ENST00000610288 CCDC112Q8NEF3 446 aa10.94□□□□□ -0.66
COL25A1-208ENST00000610288 WDR33Q9C0J8 1336 aaKnown RBP10.94□□□□□ -0.66
COL25A1-208ENST00000610288 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
COL25A1-208ENST00000610288 DDX58O95786 925 aaKnown RBP10.93□□□□□ -0.66
COL25A1-208ENST00000610288 PDCP20941 246 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 MCM5P33992 734 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 LRRFIP1Q32MZ4 808 aaKnown RBP10.93□□□□□ -0.66
COL25A1-208ENST00000610288 CPLX2Q6PUV4 134 aaKnown RBP10.93□□□□□ -0.66
COL25A1-208ENST00000610288 CCDC192P0DO97 292 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 ATF3P18847 181 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 DHX8Q14562 1220 aaKnown RBP10.93□□□□□ -0.66
COL25A1-208ENST00000610288 C20orf194Q5TEA3 1177 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 CHD1LQ86WJ1 897 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
COL25A1-208ENST00000610288 NESP48681 1621 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 G3BP1Q13283 466 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL25A1-208ENST00000610288 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 CCP110O43303 1012 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 CBX1P83916 185 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 TIGD1Q96MW7 591 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
COL25A1-208ENST00000610288 ERC2O15083 957 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 AKAP17AQ02040 695 aaKnown RBP10.92□□□□□ -0.66
COL25A1-208ENST00000610288 SKAP1Q86WV1 359 aa10.92□□□□□ -0.66
COL25A1-208ENST00000610288 H0YHG0 523 aa10.91□□□□□ -0.66
COL25A1-208ENST00000610288 MARCH6O60337 910 aa10.91□□□□□ -0.66
COL25A1-208ENST00000610288 HOOK1Q9UJC3 728 aaKnown RBP10.91□□□□□ -0.66
COL25A1-208ENST00000610288 IPO7O95373 1038 aaKnown RBP10.91□□□□□ -0.66
COL25A1-208ENST00000610288 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
COL25A1-208ENST00000610288 SYNE3Q6ZMZ3 975 aa10.91□□□□□ -0.66
COL25A1-208ENST00000610288 ERBINQ96RT1 1412 aa10.91□□□□□ -0.66
COL25A1-208ENST00000610288 FIBPO43427 364 aa10.9□□□□□ -0.66
COL25A1-208ENST00000610288 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
COL25A1-208ENST00000610288 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
COL25A1-208ENST00000610288 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.66
COL25A1-208ENST00000610288 KIF20AO95235 890 aa10.9□□□□□ -0.67
COL25A1-208ENST00000610288 PES1O00541 588 aaKnown RBP10.89□□□□□ -0.67
COL25A1-208ENST00000610288 GRIN2BQ13224 1484 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 SPC24Q8NBT2 197 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
COL25A1-208ENST00000610288 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL25A1-208ENST00000610288 PSMA5P28066 241 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 TNPO1Q92973 898 aaKnown RBP10.89□□□□□ -0.67
COL25A1-208ENST00000610288 CPLX1O14810 134 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
COL25A1-208ENST00000610288 SYTL4Q96C24 671 aaPredicted RBP10.89□□□□□ -0.67
COL25A1-208ENST00000610288 GNAI3P08754 354 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 NLRP6P59044 892 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 ERCC4Q92889 916 aaPredicted RBP10.88□□□□□ -0.67
COL25A1-208ENST00000610288 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 ARHGAP5Q13017 1502 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 NUTM2GQ5VZR2 741 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 SYCE3A1L190 88 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 KINO60870 393 aaKnown RBP10.88□□□□□ -0.67
COL25A1-208ENST00000610288 XPCQ01831 940 aaPredicted RBP10.88□□□□□ -0.67
COL25A1-208ENST00000610288 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
COL25A1-208ENST00000610288 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
COL25A1-208ENST00000610288 TSR2Q969E8 191 aaKnown RBP10.87□□□□□ -0.67
COL25A1-208ENST00000610288 PRG4Q92954 1404 aaPredicted RBP10.87□□□□□ -0.67
COL25A1-208ENST00000610288 DUSP27Q5VZP5 1158 aa10.87□□□□□ -0.67
COL25A1-208ENST00000610288 ERICH4A6NGS2 130 aa10.87□□□□□ -0.67
COL25A1-208ENST00000610288 UBTFL1P0CB47 393 aaPredicted RBP10.87□□□□□ -0.67
COL25A1-208ENST00000610288 PRKAR2BP31323 418 aa10.87□□□□□ -0.67
COL25A1-208ENST00000610288 TRIM29Q14134 588 aa10.87□□□□□ -0.67
COL25A1-208ENST00000610288 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
COL25A1-208ENST00000610288 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
COL25A1-208ENST00000610288 AXDND1Q5T1B0 1012 aaPredicted RBP10.86□□□□□ -0.67
COL25A1-208ENST00000610288 PROSER2Q86WR7 435 aaPredicted RBP10.86□□□□□ -0.67
COL25A1-208ENST00000610288 SYNJ2O15056 1496 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 AIMP1Q12904 312 aaKnown RBP10.86□□□□□ -0.67
COL25A1-208ENST00000610288 TRDNQ13061 729 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 KLHL40Q2TBA0 621 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 MPNDQ8N594 471 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 SLC12A5Q9H2X9 1139 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 KRT85P78386 507 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 CTR9Q6PD62 1173 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 GIMAP7Q8NHV1 300 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 DAPK1P53355 1430 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 DHX29Q7Z478 1369 aaKnown RBP10.86□□□□□ -0.67
COL25A1-208ENST00000610288 RIC3Q7Z5B4 369 aa10.86□□□□□ -0.67
COL25A1-208ENST00000610288 CLGNO14967 610 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 RAPGEF3O95398 923 aa10.85□□□□□ -0.67
COL25A1-208ENST00000610288 GTF2A1P52655 376 aaPredicted RBP10.85□□□□□ -0.67
COL25A1-208ENST00000610288 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
COL25A1-208ENST00000610288 TWISTNBQ3B726 338 aaPredicted RBP10.85□□□□□ -0.67
COL25A1-208ENST00000610288 CCDC191Q8NCU4 936 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms