RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 CCDC9Q9Y3X0 531 aaKnown RBP23.17■■□□□ 1.3
SGMS1-209ENST00000609445 COL14A1Q05707 1796 aaKnown RBP23.15■■□□□ 1.3
SGMS1-209ENST00000609445 SEPT12Q8IYM1 358 aa23.14■■□□□ 1.29
SGMS1-209ENST00000609445 L3MBTL2Q969R5 705 aa23.14■■□□□ 1.29
SGMS1-209ENST00000609445 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.29
SGMS1-209ENST00000609445 BTG4Q9NY30 223 aa23.13■■□□□ 1.29
SGMS1-209ENST00000609445 PHRF1Q9P1Y6 1649 aaKnown RBP23.11■■□□□ 1.29
SGMS1-209ENST00000609445 ACEP12821 1306 aa23.11■■□□□ 1.29
SGMS1-209ENST00000609445 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
SGMS1-209ENST00000609445 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
SGMS1-209ENST00000609445 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
SGMS1-209ENST00000609445 NUTM2GQ5VZR2 741 aa23.1■■□□□ 1.29
SGMS1-209ENST00000609445 CCDC61Q9Y6R9 512 aa23.1■■□□□ 1.29
SGMS1-209ENST00000609445 NBPF8Q3BBV2 869 aa23.09■■□□□ 1.29
SGMS1-209ENST00000609445 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.29
SGMS1-209ENST00000609445 ONECUT3O60422 494 aaPredicted RBP23.08■■□□□ 1.29
SGMS1-209ENST00000609445 NEUROD1Q13562 356 aa23.08■■□□□ 1.29
SGMS1-209ENST00000609445 PRDM11Q9NQV5 511 aa23.08■■□□□ 1.29
SGMS1-209ENST00000609445 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.28
SGMS1-209ENST00000609445 SRPK2P78362 688 aaKnown RBP23.07■■□□□ 1.28
SGMS1-209ENST00000609445 CCDC125Q86Z20 511 aa23.07■■□□□ 1.28
SGMS1-209ENST00000609445 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
SGMS1-209ENST00000609445 FAM98CQ17RN3 349 aaKnown RBP23.06■■□□□ 1.28
SGMS1-209ENST00000609445 CABP2Q9NPB3 220 aa23.06■■□□□ 1.28
SGMS1-209ENST00000609445 A0A0G2JS52 829 aa23.05■■□□□ 1.28
SGMS1-209ENST00000609445 MYT1Q01538 1121 aa23.05■■□□□ 1.28
SGMS1-209ENST00000609445 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
SGMS1-209ENST00000609445 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
SGMS1-209ENST00000609445 ZC3H6P61129 1189 aaKnown RBP23.04■■□□□ 1.28
SGMS1-209ENST00000609445 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
SGMS1-209ENST00000609445 BLMP54132 1417 aaPredicted RBP23.04■■□□□ 1.28
SGMS1-209ENST00000609445 SPATA31A5Q5VU36 1347 aa23.03■■□□□ 1.28
SGMS1-209ENST00000609445 SPATA31A7Q8IWB4 1347 aa23.03■■□□□ 1.28
SGMS1-209ENST00000609445 NRKQ7Z2Y5 1582 aa23.01■■□□□ 1.27
SGMS1-209ENST00000609445 DEFB132Q7Z7B7 95 aa23■■□□□ 1.27
SGMS1-209ENST00000609445 ABTB2Q8N961 1025 aa23■■□□□ 1.27
SGMS1-209ENST00000609445 THSD7AQ9UPZ6 1657 aa22.98■■□□□ 1.27
SGMS1-209ENST00000609445 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
SGMS1-209ENST00000609445 ZRANB1Q9UGI0 708 aa22.98■■□□□ 1.27
SGMS1-209ENST00000609445 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
SGMS1-209ENST00000609445 CABP1Q9NZU7 370 aa22.97■■□□□ 1.27
SGMS1-209ENST00000609445 FAM182BQ5T319 152 aa22.96■■□□□ 1.27
SGMS1-209ENST00000609445 USP19O94966 1318 aa22.96■■□□□ 1.27
SGMS1-209ENST00000609445 SF3B2Q13435 895 aaKnown RBP22.95■■□□□ 1.26
SGMS1-209ENST00000609445 SPATA31A1Q5TZJ5 1347 aa22.95■■□□□ 1.26
SGMS1-209ENST00000609445 USP6P35125 1406 aa22.94■■□□□ 1.26
SGMS1-209ENST00000609445 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
SGMS1-209ENST00000609445 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
SGMS1-209ENST00000609445 CAMTA1Q9Y6Y1 1673 aa22.93■■□□□ 1.26
SGMS1-209ENST00000609445 NLRP13Q86W25 1043 aa22.92■■□□□ 1.26
SGMS1-209ENST00000609445 SRCAPQ6ZRS2 3230 aa22.91■■□□□ 1.26
SGMS1-209ENST00000609445 SSH2Q76I76 1423 aa22.91■■□□□ 1.26
SGMS1-209ENST00000609445 CPDO75976 1380 aa22.91■■□□□ 1.26
SGMS1-209ENST00000609445 GCP02774 474 aa22.91■■□□□ 1.26
SGMS1-209ENST00000609445 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
SGMS1-209ENST00000609445 EVA1CP58658 441 aa22.9■■□□□ 1.26
SGMS1-209ENST00000609445 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
SGMS1-209ENST00000609445 PIK3C2AO00443 1686 aa22.89■■□□□ 1.25
SGMS1-209ENST00000609445 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
SGMS1-209ENST00000609445 NLRP6P59044 892 aa22.88■■□□□ 1.25
SGMS1-209ENST00000609445 LARP1Q6PKG0 1096 aaKnown RBP22.88■■□□□ 1.25
SGMS1-209ENST00000609445 AKAP12Q02952 1782 aa22.87■■□□□ 1.25
SGMS1-209ENST00000609445 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
SGMS1-209ENST00000609445 SLIT3O75094 1523 aa22.86■■□□□ 1.25
SGMS1-209ENST00000609445 TNS1Q9HBL0 1735 aaKnown RBP22.85■■□□□ 1.25
SGMS1-209ENST00000609445 BAG6P46379 1132 aa22.85■■□□□ 1.25
SGMS1-209ENST00000609445 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
SGMS1-209ENST00000609445 BARGINQ6ZT62 677 aa22.82■■□□□ 1.24
SGMS1-209ENST00000609445 CARD11Q9BXL7 1154 aa22.82■■□□□ 1.24
SGMS1-209ENST00000609445 TTC21BQ7Z4L5 1316 aa22.82■■□□□ 1.24
SGMS1-209ENST00000609445 TONSLQ96HA7 1378 aa22.81■■□□□ 1.24
SGMS1-209ENST00000609445 EN1Q05925 392 aaPredicted RBP22.81■■□□□ 1.24
SGMS1-209ENST00000609445 TCP11L2Q8N4U5 519 aa22.81■■□□□ 1.24
SGMS1-209ENST00000609445 COL18A1P39060 1754 aa22.81■■□□□ 1.24
SGMS1-209ENST00000609445 ZNF692Q9BU19 519 aaPredicted RBP22.79■■□□□ 1.24
SGMS1-209ENST00000609445 CPSF1Q10570 1443 aaKnown RBP22.79■■□□□ 1.24
SGMS1-209ENST00000609445 AATKQ6ZMQ8 1374 aa22.78■■□□□ 1.24
SGMS1-209ENST00000609445 SBNO2Q9Y2G9 1366 aa22.78■■□□□ 1.24
SGMS1-209ENST00000609445 TRIM37O94972 964 aa22.78■■□□□ 1.24
SGMS1-209ENST00000609445 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
SGMS1-209ENST00000609445 RGPD5Q99666 1765 aa22.78■■□□□ 1.24
SGMS1-209ENST00000609445 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
SGMS1-209ENST00000609445 CRB1P82279 1406 aa22.77■■□□□ 1.24
SGMS1-209ENST00000609445 SOX12O15370 315 aa22.77■■□□□ 1.24
SGMS1-209ENST00000609445 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
SGMS1-209ENST00000609445 FAM196AQ6ZSG2 479 aa22.77■■□□□ 1.24
SGMS1-209ENST00000609445 PARP4Q9UKK3 1724 aaKnown RBP22.77■■□□□ 1.23
SGMS1-209ENST00000609445 PSDA5PKW4 1024 aaPredicted RBP22.76■■□□□ 1.23
SGMS1-209ENST00000609445 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
SGMS1-209ENST00000609445 AXIN2Q9Y2T1 843 aa22.75■■□□□ 1.23
SGMS1-209ENST00000609445 THRAP3Q9Y2W1 955 aaKnown RBP22.75■■□□□ 1.23
SGMS1-209ENST00000609445 TTC21AQ8NDW8 1320 aa22.75■■□□□ 1.23
SGMS1-209ENST00000609445 EZH2Q15910 746 aaKnown RBP22.73■■□□□ 1.23
SGMS1-209ENST00000609445 CD163L1Q9NR16 1453 aa22.73■■□□□ 1.23
SGMS1-209ENST00000609445 NFAT5O94916 1531 aa22.72■■□□□ 1.23
SGMS1-209ENST00000609445 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
SGMS1-209ENST00000609445 ARHGEF25Q86VW2 580 aa22.72■■□□□ 1.23
SGMS1-209ENST00000609445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.72■■□□□ 1.23
SGMS1-209ENST00000609445 APBA3O96018 575 aa22.71■■□□□ 1.23
SGMS1-209ENST00000609445 TOM1L2Q6ZVM7 507 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms