RNA–Protein interactions for RNA: ENST00000608647.5

LINC00635-220, long intergenic non-protein coding RNA 635, humanhuman

TSL 5

Gene LINC00635, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-220ENST00000608647 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
LINC00635-220ENST00000608647 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
LINC00635-220ENST00000608647 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
LINC00635-220ENST00000608647 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
LINC00635-220ENST00000608647 TMF1P82094 1093 aa12.55□□□□□ -0.4
LINC00635-220ENST00000608647 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
LINC00635-220ENST00000608647 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
LINC00635-220ENST00000608647 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
LINC00635-220ENST00000608647 SRPK2P78362 688 aaKnown RBP12.53□□□□□ -0.4
LINC00635-220ENST00000608647 MIER1Q8N108 512 aa12.53□□□□□ -0.4
LINC00635-220ENST00000608647 TESK2Q96S53 571 aa12.53□□□□□ -0.4
LINC00635-220ENST00000608647 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
LINC00635-220ENST00000608647 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
LINC00635-220ENST00000608647 HSPA5P11021 654 aaKnown RBP12.51□□□□□ -0.41
LINC00635-220ENST00000608647 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
LINC00635-220ENST00000608647 NPHP3Q7Z494 1330 aa12.51□□□□□ -0.41
LINC00635-220ENST00000608647 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
LINC00635-220ENST00000608647 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
LINC00635-220ENST00000608647 PHLPP1O60346 1717 aa12.49□□□□□ -0.41
LINC00635-220ENST00000608647 PPIP5K1Q6PFW1 1433 aa12.49□□□□□ -0.41
LINC00635-220ENST00000608647 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
LINC00635-220ENST00000608647 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
LINC00635-220ENST00000608647 NUDT16Q96DE0 195 aaKnown RBP12.49□□□□□ -0.41
LINC00635-220ENST00000608647 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
LINC00635-220ENST00000608647 ESCO1Q5FWF5 840 aa12.48□□□□□ -0.41
LINC00635-220ENST00000608647 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
LINC00635-220ENST00000608647 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
LINC00635-220ENST00000608647 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
LINC00635-220ENST00000608647 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
LINC00635-220ENST00000608647 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
LINC00635-220ENST00000608647 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
LINC00635-220ENST00000608647 MYOM1P52179 1685 aa12.46□□□□□ -0.41
LINC00635-220ENST00000608647 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
LINC00635-220ENST00000608647 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
LINC00635-220ENST00000608647 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
LINC00635-220ENST00000608647 PSME1Q06323 249 aa12.45□□□□□ -0.42
LINC00635-220ENST00000608647 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
LINC00635-220ENST00000608647 PXDNQ92626 1479 aa12.45□□□□□ -0.42
LINC00635-220ENST00000608647 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
LINC00635-220ENST00000608647 NUTM2FA1L443 756 aa12.44□□□□□ -0.42
LINC00635-220ENST00000608647 NGDNQ8NEJ9 315 aaKnown RBP12.44□□□□□ -0.42
LINC00635-220ENST00000608647 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
LINC00635-220ENST00000608647 SHPRHQ149N8 1683 aa12.44□□□□□ -0.42
LINC00635-220ENST00000608647 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
LINC00635-220ENST00000608647 SOS2Q07890 1332 aaPredicted RBP12.43□□□□□ -0.42
LINC00635-220ENST00000608647 TRPM3Q9HCF6 1732 aaPredicted RBP12.43□□□□□ -0.42
LINC00635-220ENST00000608647 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
LINC00635-220ENST00000608647 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
LINC00635-220ENST00000608647 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
LINC00635-220ENST00000608647 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
LINC00635-220ENST00000608647 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
LINC00635-220ENST00000608647 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
LINC00635-220ENST00000608647 GABBR2O75899 941 aa12.42□□□□□ -0.42
LINC00635-220ENST00000608647 CLCN6P51797 869 aa12.42□□□□□ -0.42
LINC00635-220ENST00000608647 LRRC59Q96AG4 307 aaKnown RBP12.42□□□□□ -0.42
LINC00635-220ENST00000608647 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
LINC00635-220ENST00000608647 USP6P35125 1406 aa12.42□□□□□ -0.42
LINC00635-220ENST00000608647 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
LINC00635-220ENST00000608647 ACEP12821 1306 aa12.41□□□□□ -0.42
LINC00635-220ENST00000608647 MED1Q15648 1581 aaPredicted RBP12.41□□□□□ -0.42
LINC00635-220ENST00000608647 EDC4Q6P2E9 1401 aaKnown RBP12.41□□□□□ -0.42
LINC00635-220ENST00000608647 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
LINC00635-220ENST00000608647 ALS2Q96Q42 1657 aa12.41□□□□□ -0.42
LINC00635-220ENST00000608647 JCADQ9P266 1359 aa12.41□□□□□ -0.42
LINC00635-220ENST00000608647 TTC21AQ8NDW8 1320 aa12.4□□□□□ -0.42
LINC00635-220ENST00000608647 FOXO3O43524 673 aa12.4□□□□□ -0.42
LINC00635-220ENST00000608647 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
LINC00635-220ENST00000608647 TMC1Q8TDI8 760 aa12.4□□□□□ -0.42
LINC00635-220ENST00000608647 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
LINC00635-220ENST00000608647 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
LINC00635-220ENST00000608647 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
LINC00635-220ENST00000608647 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
LINC00635-220ENST00000608647 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
LINC00635-220ENST00000608647 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
LINC00635-220ENST00000608647 CD163L1Q9NR16 1453 aa12.39□□□□□ -0.43
LINC00635-220ENST00000608647 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
LINC00635-220ENST00000608647 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
LINC00635-220ENST00000608647 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
LINC00635-220ENST00000608647 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
LINC00635-220ENST00000608647 HSPA1LP34931 641 aa12.37□□□□□ -0.43
LINC00635-220ENST00000608647 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
LINC00635-220ENST00000608647 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
LINC00635-220ENST00000608647 KIF20BQ96Q89 1820 aa12.36□□□□□ -0.43
LINC00635-220ENST00000608647 NSD2O96028 1365 aa12.35□□□□□ -0.43
LINC00635-220ENST00000608647 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
LINC00635-220ENST00000608647 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
LINC00635-220ENST00000608647 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
LINC00635-220ENST00000608647 WASHC2AQ641Q2 1341 aa12.35□□□□□ -0.43
LINC00635-220ENST00000608647 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
LINC00635-220ENST00000608647 POLR3GLQ9BT43 218 aa12.34□□□□□ -0.43
LINC00635-220ENST00000608647 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
LINC00635-220ENST00000608647 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
LINC00635-220ENST00000608647 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
LINC00635-220ENST00000608647 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
LINC00635-220ENST00000608647 NUBP1P53384 320 aa12.33□□□□□ -0.44
LINC00635-220ENST00000608647 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
LINC00635-220ENST00000608647 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
LINC00635-220ENST00000608647 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
LINC00635-220ENST00000608647 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
LINC00635-220ENST00000608647 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms