RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 SKOR1P84550 965 aa12.45□□□□□ -0.42
LINC00343-211ENST00000608426 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
LINC00343-211ENST00000608426 GJD4Q96KN9 370 aaPredicted RBP12.45□□□□□ -0.42
LINC00343-211ENST00000608426 FKBPLQ9UIM3 349 aa12.45□□□□□ -0.42
LINC00343-211ENST00000608426 FOXC1Q12948 553 aa12.44□□□□□ -0.42
LINC00343-211ENST00000608426 MCM6Q14566 821 aa12.44□□□□□ -0.42
LINC00343-211ENST00000608426 NBPF14Q5TI25 921 aa12.44□□□□□ -0.42
LINC00343-211ENST00000608426 PNMA1Q8ND90 353 aa12.44□□□□□ -0.42
LINC00343-211ENST00000608426 AGERQ15109 404 aa12.42□□□□□ -0.42
LINC00343-211ENST00000608426 SOCS7O14512 581 aa12.41□□□□□ -0.42
LINC00343-211ENST00000608426 FLIIQ13045 1269 aa12.41□□□□□ -0.42
LINC00343-211ENST00000608426 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
LINC00343-211ENST00000608426 TNFRSF10AO00220 468 aa12.4□□□□□ -0.42
LINC00343-211ENST00000608426 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.42
LINC00343-211ENST00000608426 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
LINC00343-211ENST00000608426 FOXJ1Q92949 421 aa12.4□□□□□ -0.42
LINC00343-211ENST00000608426 NDUFB9Q9Y6M9 179 aa12.4□□□□□ -0.42
LINC00343-211ENST00000608426 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
LINC00343-211ENST00000608426 WNT7AO00755 349 aa12.38□□□□□ -0.43
LINC00343-211ENST00000608426 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
LINC00343-211ENST00000608426 PKD2L1Q9P0L9 805 aa12.38□□□□□ -0.43
LINC00343-211ENST00000608426 GDF9O60383 454 aa12.37□□□□□ -0.43
LINC00343-211ENST00000608426 PDXDC2PQ6P474 469 aa12.37□□□□□ -0.43
LINC00343-211ENST00000608426 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
LINC00343-211ENST00000608426 BPHLQ86WA6 291 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-211ENST00000608426 MRGPRX2Q96LB1 330 aa12.37□□□□□ -0.43
LINC00343-211ENST00000608426 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
LINC00343-211ENST00000608426 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
LINC00343-211ENST00000608426 TBC1D2BQ9UPU7 963 aa12.36□□□□□ -0.43
LINC00343-211ENST00000608426 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
LINC00343-211ENST00000608426 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
LINC00343-211ENST00000608426 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
LINC00343-211ENST00000608426 PTK2Q05397 1052 aa12.34□□□□□ -0.43
LINC00343-211ENST00000608426 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
LINC00343-211ENST00000608426 ARHGAP9Q9BRR9 750 aa12.34□□□□□ -0.43
LINC00343-211ENST00000608426 GFRA3O60609 400 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
LINC00343-211ENST00000608426 PRR20EP86478 221 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 PRR20CP86479 221 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 PRR20DP86480 221 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 PRR20BP86481 221 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 PRR20AP86496 221 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 C4orf48Q5BLP8 95 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
LINC00343-211ENST00000608426 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
LINC00343-211ENST00000608426 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
LINC00343-211ENST00000608426 CYP4X1Q8N118 509 aa12.32□□□□□ -0.44
LINC00343-211ENST00000608426 ABL2P42684 1182 aa12.31□□□□□ -0.44
LINC00343-211ENST00000608426 ZBTB33Q86T24 672 aa12.31□□□□□ -0.44
LINC00343-211ENST00000608426 FAM174AQ8TBP5 190 aa12.31□□□□□ -0.44
LINC00343-211ENST00000608426 TTC24A2A3L6 582 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-211ENST00000608426 GPSM3Q9Y4H4 160 aa12.3□□□□□ -0.44
LINC00343-211ENST00000608426 RAD21O60216 631 aa12.29□□□□□ -0.44
LINC00343-211ENST00000608426 GPR37L1O60883 481 aa12.29□□□□□ -0.44
LINC00343-211ENST00000608426 POM121Q96HA1 1249 aa12.29□□□□□ -0.44
LINC00343-211ENST00000608426 COG6Q9Y2V7 657 aa12.29□□□□□ -0.44
LINC00343-211ENST00000608426 ZBBXA8MT70 800 aa12.28□□□□□ -0.44
LINC00343-211ENST00000608426 SIAH2O43255 324 aa12.28□□□□□ -0.44
LINC00343-211ENST00000608426 SNIP1Q8TAD8 396 aaKnown RBP12.28□□□□□ -0.44
LINC00343-211ENST00000608426 OCSTAMPQ9BR26 566 aa12.28□□□□□ -0.44
LINC00343-211ENST00000608426 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
LINC00343-211ENST00000608426 ERFEQ4G0M1 354 aa12.27□□□□□ -0.45
LINC00343-211ENST00000608426 ADAM32Q8TC27 787 aa12.27□□□□□ -0.45
LINC00343-211ENST00000608426 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
LINC00343-211ENST00000608426 ALDH1A1P00352 501 aa12.26□□□□□ -0.45
LINC00343-211ENST00000608426 FBXO45P0C2W1 286 aa12.26□□□□□ -0.45
LINC00343-211ENST00000608426 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
LINC00343-211ENST00000608426 C1QTNF2Q9BXJ5 285 aa12.26□□□□□ -0.45
LINC00343-211ENST00000608426 TOR4AQ9NXH8 423 aa12.26□□□□□ -0.45
LINC00343-211ENST00000608426 LAPTM4AQ15012 233 aa12.25□□□□□ -0.45
LINC00343-211ENST00000608426 NR1H3Q13133 447 aa12.24□□□□□ -0.45
LINC00343-211ENST00000608426 IRF5Q13568 498 aa12.24□□□□□ -0.45
LINC00343-211ENST00000608426 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
LINC00343-211ENST00000608426 FAM187AA6NFU0 413 aa12.23□□□□□ -0.45
LINC00343-211ENST00000608426 J3QL48 77 aa12.23□□□□□ -0.45
LINC00343-211ENST00000608426 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
LINC00343-211ENST00000608426 CLUAP1Q96AJ1 413 aa12.22□□□□□ -0.45
LINC00343-211ENST00000608426 WASF2Q9Y6W5 498 aa12.22□□□□□ -0.45
LINC00343-211ENST00000608426 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.45
LINC00343-211ENST00000608426 WWC1Q8IX03 1113 aa12.21□□□□□ -0.45
LINC00343-211ENST00000608426 PCDHB9Q9Y5E1 797 aa12.21□□□□□ -0.45
LINC00343-211ENST00000608426 PKDCCQ504Y2 493 aa12.2□□□□□ -0.46
LINC00343-211ENST00000608426 VASH1Q7L8A9 365 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-211ENST00000608426 MPNDQ8N594 471 aa12.2□□□□□ -0.46
LINC00343-211ENST00000608426 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-211ENST00000608426 SMPD1P17405 629 aa12.19□□□□□ -0.46
LINC00343-211ENST00000608426 VAC14Q08AM6 782 aa12.19□□□□□ -0.46
LINC00343-211ENST00000608426 CDK15Q96Q40 435 aa12.19□□□□□ -0.46
LINC00343-211ENST00000608426 ADH1CP00326 375 aa12.17□□□□□ -0.46
LINC00343-211ENST00000608426 WASHC4Q2M389 1173 aa12.17□□□□□ -0.46
LINC00343-211ENST00000608426 CDV3Q9UKY7 258 aaKnown RBP12.17□□□□□ -0.46
LINC00343-211ENST00000608426 MAP4K5Q9Y4K4 846 aa12.17□□□□□ -0.46
LINC00343-211ENST00000608426 FSHRP23945 695 aa12.16□□□□□ -0.46
LINC00343-211ENST00000608426 DGAT1O75907 488 aa12.15□□□□□ -0.46
LINC00343-211ENST00000608426 Q6ZNB5 142 aa12.15□□□□□ -0.46
LINC00343-211ENST00000608426 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-211ENST00000608426 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC00343-211ENST00000608426 NNTQ13423 1086 aa12.14□□□□□ -0.47
LINC00343-211ENST00000608426 NBPF20Q3BBV1 942 aa12.14□□□□□ -0.47
LINC00343-211ENST00000608426 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms