RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 CSPP1Q1MSJ5 1256 aa6.74□□□□□ -1.33
ZEB1-224ENST00000606161 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
ZEB1-224ENST00000606161 ZNF511Q8NB15 262 aa6.74□□□□□ -1.33
ZEB1-224ENST00000606161 ZBTB3Q9H5J0 574 aa6.74□□□□□ -1.33
ZEB1-224ENST00000606161 MAP10Q9P2G4 905 aa6.74□□□□□ -1.33
ZEB1-224ENST00000606161 DIXDC1Q155Q3 683 aa6.73□□□□□ -1.33
ZEB1-224ENST00000606161 PRPF38BQ5VTL8 546 aaKnown RBP6.73□□□□□ -1.33
ZEB1-224ENST00000606161 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
ZEB1-224ENST00000606161 TRIM47Q96LD4 638 aa6.72□□□□□ -1.33
ZEB1-224ENST00000606161 LILRB3O75022 631 aa6.71□□□□□ -1.34
ZEB1-224ENST00000606161 BMP1P13497 986 aa6.71□□□□□ -1.34
ZEB1-224ENST00000606161 NFX1Q12986 1120 aaKnown RBP6.71□□□□□ -1.34
ZEB1-224ENST00000606161 TRIM46Q7Z4K8 759 aa6.71□□□□□ -1.34
ZEB1-224ENST00000606161 FOXJ1Q92949 421 aa6.71□□□□□ -1.34
ZEB1-224ENST00000606161 CTHP32929 405 aa6.7□□□□□ -1.34
ZEB1-224ENST00000606161 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
ZEB1-224ENST00000606161 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
ZEB1-224ENST00000606161 RTL5Q5HYW3 569 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-224ENST00000606161 FBXO31Q5XUX0 539 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-224ENST00000606161 VARSP26640 1264 aaKnown RBP6.69□□□□□ -1.34
ZEB1-224ENST00000606161 WASF2Q9Y6W5 498 aa6.69□□□□□ -1.34
ZEB1-224ENST00000606161 MPNDQ8N594 471 aa6.68□□□□□ -1.34
ZEB1-224ENST00000606161 CAPN5O15484 640 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-224ENST00000606161 CLK2P49760 499 aaKnown RBP6.67□□□□□ -1.34
ZEB1-224ENST00000606161 NNTQ13423 1086 aa6.67□□□□□ -1.34
ZEB1-224ENST00000606161 WFS1O76024 890 aa6.66□□□□□ -1.34
ZEB1-224ENST00000606161 TSC1Q92574 1164 aa6.66□□□□□ -1.34
ZEB1-224ENST00000606161 KLF16Q9BXK1 252 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-224ENST00000606161 GPBP1L1Q9HC44 474 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-224ENST00000606161 SENP2Q9HC62 589 aa6.66□□□□□ -1.34
ZEB1-224ENST00000606161 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-224ENST00000606161 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-224ENST00000606161 NR3C2P08235 984 aa6.65□□□□□ -1.34
ZEB1-224ENST00000606161 TIMP2P16035 220 aa6.65□□□□□ -1.34
ZEB1-224ENST00000606161 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-224ENST00000606161 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
ZEB1-224ENST00000606161 POLR3EQ9NVU0 708 aa6.65□□□□□ -1.34
ZEB1-224ENST00000606161 TERTO14746 1132 aaKnown RBP6.64□□□□□ -1.35
ZEB1-224ENST00000606161 ADH1CP00326 375 aa6.64□□□□□ -1.35
ZEB1-224ENST00000606161 SH3RF1Q7Z6J0 888 aa6.64□□□□□ -1.35
ZEB1-224ENST00000606161 FAM174AQ8TBP5 190 aa6.64□□□□□ -1.35
ZEB1-224ENST00000606161 KIFC2Q96AC6 838 aa6.64□□□□□ -1.35
ZEB1-224ENST00000606161 CDK15Q96Q40 435 aa6.64□□□□□ -1.35
ZEB1-224ENST00000606161 C1QTNF2Q9BXJ5 285 aa6.63□□□□□ -1.35
ZEB1-224ENST00000606161 PLEKHG3A1L390 1219 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 GRM5P41594 1212 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 CTDSPL2Q05D32 466 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 SH3BP5LQ7L8J4 393 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 ZFP42Q96MM3 310 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 FAM117AQ9C073 453 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 KDM4CQ9H3R0 1056 aa6.62□□□□□ -1.35
ZEB1-224ENST00000606161 WIPF1O43516 503 aa6.61□□□□□ -1.35
ZEB1-224ENST00000606161 WDR4P57081 412 aaKnown RBP6.61□□□□□ -1.35
ZEB1-224ENST00000606161 PROCA1Q8NCQ7 364 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-224ENST00000606161 ZFAND3Q9H8U3 227 aa6.61□□□□□ -1.35
ZEB1-224ENST00000606161 ARID5BQ14865 1188 aa6.6□□□□□ -1.35
ZEB1-224ENST00000606161 MRPL14Q6P1L8 145 aaKnown RBP6.6□□□□□ -1.35
ZEB1-224ENST00000606161 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
ZEB1-224ENST00000606161 LRRN4Q8WUT4 740 aa6.6□□□□□ -1.35
ZEB1-224ENST00000606161 ITPKCQ96DU7 683 aa6.6□□□□□ -1.35
ZEB1-224ENST00000606161 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
ZEB1-224ENST00000606161 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
ZEB1-224ENST00000606161 ZIC2O95409 532 aaPredicted RBP6.59□□□□□ -1.35
ZEB1-224ENST00000606161 SH3D19Q5HYK7 790 aa6.59□□□□□ -1.35
ZEB1-224ENST00000606161 BPHLQ86WA6 291 aaPredicted RBP6.59□□□□□ -1.35
ZEB1-224ENST00000606161 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
ZEB1-224ENST00000606161 SOBPA7XYQ1 873 aa6.58□□□□□ -1.36
ZEB1-224ENST00000606161 VEGFBP49765 207 aa6.58□□□□□ -1.36
ZEB1-224ENST00000606161 AGERQ15109 404 aa6.58□□□□□ -1.36
ZEB1-224ENST00000606161 SKIV2LQ15477 1246 aaKnown RBP6.58□□□□□ -1.36
ZEB1-224ENST00000606161 TRMT44Q8IYL2 757 aaKnown RBP6.58□□□□□ -1.36
ZEB1-224ENST00000606161 FSHRP23945 695 aa6.57□□□□□ -1.36
ZEB1-224ENST00000606161 NR5A1Q13285 461 aa6.57□□□□□ -1.36
ZEB1-224ENST00000606161 NBPF14Q5TI25 921 aa6.57□□□□□ -1.36
ZEB1-224ENST00000606161 PPP2R2DQ66LE6 453 aa6.57□□□□□ -1.36
ZEB1-224ENST00000606161 ARMC2Q8NEN0 867 aa6.57□□□□□ -1.36
ZEB1-224ENST00000606161 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
ZEB1-224ENST00000606161 NXF1Q9UBU9 619 aaKnown RBP6.57□□□□□ -1.36
ZEB1-224ENST00000606161 MAGEB6P1A0A0J9YX57 407 aa6.56□□□□□ -1.36
ZEB1-224ENST00000606161 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-224ENST00000606161 ERFEQ4G0M1 354 aa6.56□□□□□ -1.36
ZEB1-224ENST00000606161 CARD14Q9BXL6 1004 aa6.56□□□□□ -1.36
ZEB1-224ENST00000606161 MAP4K5Q9Y4K4 846 aa6.56□□□□□ -1.36
ZEB1-224ENST00000606161 ERBB4Q15303 1308 aa6.55□□□□□ -1.36
ZEB1-224ENST00000606161 H3BM21 787 aa6.55□□□□□ -1.36
ZEB1-224ENST00000606161 NR6A1Q15406 480 aa6.55□□□□□ -1.36
ZEB1-224ENST00000606161 EPS8L1Q8TE68 723 aa6.55□□□□□ -1.36
ZEB1-224ENST00000606161 HMX1Q9NP08 348 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-224ENST00000606161 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
ZEB1-224ENST00000606161 TPRNQ4KMQ1 711 aa6.54□□□□□ -1.36
ZEB1-224ENST00000606161 MEIOBQ8N635 442 aa6.54□□□□□ -1.36
ZEB1-224ENST00000606161 GPKOWQ92917 476 aaPredicted RBP eCLIP6.54□□□□□ -1.36
ZEB1-224ENST00000606161 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
ZEB1-224ENST00000606161 GMPRP36959 345 aa6.53□□□□□ -1.36
ZEB1-224ENST00000606161 SCARF1Q14162 830 aa6.53□□□□□ -1.36
ZEB1-224ENST00000606161 C6orf118Q5T5N4 469 aa6.53□□□□□ -1.36
ZEB1-224ENST00000606161 VASH1Q7L8A9 365 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-224ENST00000606161 LINC00528Q8N1L1 170 aa6.53□□□□□ -1.36
ZEB1-224ENST00000606161 FKBPLQ9UIM3 349 aa6.53□□□□□ -1.36
ZEB1-224ENST00000606161 PDXDC2PQ6P474 469 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms