RNA–Protein interactions for RNA: ENST00000605476.5

SRGAP2-214, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-214ENST00000605476 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
SRGAP2-214ENST00000605476 FBLN1P23142 703 aa13.66□□□□□ -0.22
SRGAP2-214ENST00000605476 SLIT1O75093 1534 aa13.65□□□□□ -0.22
SRGAP2-214ENST00000605476 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
SRGAP2-214ENST00000605476 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
SRGAP2-214ENST00000605476 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
SRGAP2-214ENST00000605476 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
SRGAP2-214ENST00000605476 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
SRGAP2-214ENST00000605476 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
SRGAP2-214ENST00000605476 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-214ENST00000605476 PTPRUQ92729 1446 aa13.63□□□□□ -0.23
SRGAP2-214ENST00000605476 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
SRGAP2-214ENST00000605476 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
SRGAP2-214ENST00000605476 BCAR3O75815 825 aa13.63□□□□□ -0.23
SRGAP2-214ENST00000605476 PNPLA6Q8IY17 1366 aa13.62□□□□□ -0.23
SRGAP2-214ENST00000605476 NME9Q86XW9 330 aa13.62□□□□□ -0.23
SRGAP2-214ENST00000605476 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
SRGAP2-214ENST00000605476 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
SRGAP2-214ENST00000605476 RIMS1Q86UR5 1692 aaKnown RBP13.61□□□□□ -0.23
SRGAP2-214ENST00000605476 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
SRGAP2-214ENST00000605476 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
SRGAP2-214ENST00000605476 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
SRGAP2-214ENST00000605476 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
SRGAP2-214ENST00000605476 POLKQ9UBT6 870 aa13.6□□□□□ -0.23
SRGAP2-214ENST00000605476 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
SRGAP2-214ENST00000605476 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
SRGAP2-214ENST00000605476 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
SRGAP2-214ENST00000605476 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
SRGAP2-214ENST00000605476 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
SRGAP2-214ENST00000605476 MSH5O43196 834 aa13.58□□□□□ -0.23
SRGAP2-214ENST00000605476 WDR63Q8IWG1 891 aa13.58□□□□□ -0.23
SRGAP2-214ENST00000605476 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.23
SRGAP2-214ENST00000605476 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
SRGAP2-214ENST00000605476 FANCIQ9NVI1 1328 aa13.58□□□□□ -0.24
SRGAP2-214ENST00000605476 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
SRGAP2-214ENST00000605476 AMOTL2Q9Y2J4 779 aa13.57□□□□□ -0.24
SRGAP2-214ENST00000605476 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
SRGAP2-214ENST00000605476 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2-214ENST00000605476 XRN1Q8IZH2 1706 aaKnown RBP13.56□□□□□ -0.24
SRGAP2-214ENST00000605476 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
SRGAP2-214ENST00000605476 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
SRGAP2-214ENST00000605476 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
SRGAP2-214ENST00000605476 TBX22Q9Y458 520 aa13.55□□□□□ -0.24
SRGAP2-214ENST00000605476 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
SRGAP2-214ENST00000605476 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 SKAP1Q86WV1 359 aa13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 ACEP12821 1306 aa13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 COG3Q96JB2 828 aa13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
SRGAP2-214ENST00000605476 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
SRGAP2-214ENST00000605476 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
SRGAP2-214ENST00000605476 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
SRGAP2-214ENST00000605476 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
SRGAP2-214ENST00000605476 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
SRGAP2-214ENST00000605476 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
SRGAP2-214ENST00000605476 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.24
SRGAP2-214ENST00000605476 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.25
SRGAP2-214ENST00000605476 HMOX1P09601 288 aa13.52□□□□□ -0.25
SRGAP2-214ENST00000605476 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
SRGAP2-214ENST00000605476 RIPK4P57078 832 aa13.52□□□□□ -0.25
SRGAP2-214ENST00000605476 MYH16Q9H6N6 1097 aa13.52□□□□□ -0.25
SRGAP2-214ENST00000605476 USP6P35125 1406 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 TTC21BQ7Z4L5 1316 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 ZNF142P52746 1687 aaPredicted RBP13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 FCHSD2O94868 740 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 IL13P35225 146 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
SRGAP2-214ENST00000605476 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
SRGAP2-214ENST00000605476 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
SRGAP2-214ENST00000605476 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
SRGAP2-214ENST00000605476 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
SRGAP2-214ENST00000605476 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
SRGAP2-214ENST00000605476 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
SRGAP2-214ENST00000605476 CHD2O14647 1828 aaKnown RBP13.49□□□□□ -0.25
SRGAP2-214ENST00000605476 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
SRGAP2-214ENST00000605476 KCNA6P17658 529 aa13.49□□□□□ -0.25
SRGAP2-214ENST00000605476 PDE3AQ14432 1141 aa13.49□□□□□ -0.25
SRGAP2-214ENST00000605476 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
SRGAP2-214ENST00000605476 COG6Q9Y2V7 657 aa13.49□□□□□ -0.25
SRGAP2-214ENST00000605476 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
SRGAP2-214ENST00000605476 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
SRGAP2-214ENST00000605476 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
SRGAP2-214ENST00000605476 EXOSC9Q06265 439 aaKnown RBP13.48□□□□□ -0.25
SRGAP2-214ENST00000605476 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
SRGAP2-214ENST00000605476 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
SRGAP2-214ENST00000605476 RLBP1P12271 317 aa13.47□□□□□ -0.25
SRGAP2-214ENST00000605476 ERICH6Q7L0X2 663 aa13.47□□□□□ -0.25
SRGAP2-214ENST00000605476 IL16Q14005 1332 aa13.46□□□□□ -0.25
SRGAP2-214ENST00000605476 SETD1BQ9UPS6 1966 aaKnown RBP13.46□□□□□ -0.26
SRGAP2-214ENST00000605476 SOX12O15370 315 aa13.45□□□□□ -0.26
SRGAP2-214ENST00000605476 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
SRGAP2-214ENST00000605476 MARF1Q9Y4F3 1742 aaKnown RBP13.45□□□□□ -0.26
SRGAP2-214ENST00000605476 NEFMP07197 916 aa13.45□□□□□ -0.26
SRGAP2-214ENST00000605476 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
SRGAP2-214ENST00000605476 CLUAP1Q96AJ1 413 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms