RNA–Protein interactions for RNA: ENST00000605031.5

FOCAD-215, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-215ENST00000605031 NFX1Q12986 1120 aaKnown RBP9.59□□□□□ -0.87
FOCAD-215ENST00000605031 RIC3Q7Z5B4 369 aa9.59□□□□□ -0.87
FOCAD-215ENST00000605031 BAP1Q92560 729 aa9.59□□□□□ -0.87
FOCAD-215ENST00000605031 WIPF1O43516 503 aa9.58□□□□□ -0.88
FOCAD-215ENST00000605031 PDE4DQ08499 809 aa9.58□□□□□ -0.88
FOCAD-215ENST00000605031 CFAP99D6REC4 459 aa9.57□□□□□ -0.88
FOCAD-215ENST00000605031 PCDHB15Q9Y5E8 787 aa9.57□□□□□ -0.88
FOCAD-215ENST00000605031 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
FOCAD-215ENST00000605031 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
FOCAD-215ENST00000605031 NPAS3Q8IXF0 933 aa9.56□□□□□ -0.88
FOCAD-215ENST00000605031 FAM174AQ8TBP5 190 aa9.56□□□□□ -0.88
FOCAD-215ENST00000605031 SNRPBP14678 240 aaKnown RBP9.55□□□□□ -0.88
FOCAD-215ENST00000605031 CTHP32929 405 aa9.55□□□□□ -0.88
FOCAD-215ENST00000605031 ARMC2Q8NEN0 867 aa9.55□□□□□ -0.88
FOCAD-215ENST00000605031 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
FOCAD-215ENST00000605031 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
FOCAD-215ENST00000605031 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
FOCAD-215ENST00000605031 RSPH6AQ9H0K4 717 aa9.53□□□□□ -0.88
FOCAD-215ENST00000605031 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
FOCAD-215ENST00000605031 LILRB3O75022 631 aa9.52□□□□□ -0.89
FOCAD-215ENST00000605031 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
FOCAD-215ENST00000605031 ADH1CP00326 375 aa9.51□□□□□ -0.89
FOCAD-215ENST00000605031 NNTQ13423 1086 aa9.51□□□□□ -0.89
FOCAD-215ENST00000605031 TRIM46Q7Z4K8 759 aa9.51□□□□□ -0.89
FOCAD-215ENST00000605031 BPHLQ86WA6 291 aaPredicted RBP9.51□□□□□ -0.89
FOCAD-215ENST00000605031 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
FOCAD-215ENST00000605031 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
FOCAD-215ENST00000605031 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
FOCAD-215ENST00000605031 GPKOWQ92917 476 aaPredicted RBP eCLIP9.5□□□□□ -0.89
FOCAD-215ENST00000605031 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
FOCAD-215ENST00000605031 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
FOCAD-215ENST00000605031 CLK2P49760 499 aaKnown RBP9.49□□□□□ -0.89
FOCAD-215ENST00000605031 NR5A1Q13285 461 aa9.49□□□□□ -0.89
FOCAD-215ENST00000605031 NBPF14Q5TI25 921 aa9.49□□□□□ -0.89
FOCAD-215ENST00000605031 SLC24A3Q9HC58 644 aa9.49□□□□□ -0.89
FOCAD-215ENST00000605031 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
FOCAD-215ENST00000605031 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
FOCAD-215ENST00000605031 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
FOCAD-215ENST00000605031 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
FOCAD-215ENST00000605031 NXF1Q9UBU9 619 aaKnown RBP9.48□□□□□ -0.89
FOCAD-215ENST00000605031 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
FOCAD-215ENST00000605031 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
FOCAD-215ENST00000605031 TIMP2P16035 220 aa9.47□□□□□ -0.89
FOCAD-215ENST00000605031 BMP1P13497 986 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 SCARF1Q14162 830 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 QPCTQ16769 361 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 CSPP1Q1MSJ5 1256 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 MRPL14Q6P1L8 145 aaKnown RBP9.46□□□□□ -0.9
FOCAD-215ENST00000605031 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 KLF16Q9BXK1 252 aaPredicted RBP9.46□□□□□ -0.9
FOCAD-215ENST00000605031 MAP4K5Q9Y4K4 846 aa9.46□□□□□ -0.9
FOCAD-215ENST00000605031 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
FOCAD-215ENST00000605031 WDR4P57081 412 aaKnown RBP9.45□□□□□ -0.9
FOCAD-215ENST00000605031 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
FOCAD-215ENST00000605031 TRMT44Q8IYL2 757 aaKnown RBP9.45□□□□□ -0.9
FOCAD-215ENST00000605031 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
FOCAD-215ENST00000605031 AGERQ15109 404 aa9.43□□□□□ -0.9
FOCAD-215ENST00000605031 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
FOCAD-215ENST00000605031 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
FOCAD-215ENST00000605031 TSC1Q92574 1164 aa9.42□□□□□ -0.9
FOCAD-215ENST00000605031 IRF7Q92985 503 aa9.42□□□□□ -0.9
FOCAD-215ENST00000605031 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
FOCAD-215ENST00000605031 H3BM21 787 aa9.4□□□□□ -0.9
FOCAD-215ENST00000605031 GRM5P41594 1212 aa9.4□□□□□ -0.9
FOCAD-215ENST00000605031 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
FOCAD-215ENST00000605031 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
FOCAD-215ENST00000605031 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
FOCAD-215ENST00000605031 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
FOCAD-215ENST00000605031 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
FOCAD-215ENST00000605031 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
FOCAD-215ENST00000605031 SKIV2LQ15477 1246 aaKnown RBP9.39□□□□□ -0.91
FOCAD-215ENST00000605031 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
FOCAD-215ENST00000605031 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
FOCAD-215ENST00000605031 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
FOCAD-215ENST00000605031 FAM181BA6NEQ2 426 aa9.37□□□□□ -0.91
FOCAD-215ENST00000605031 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
FOCAD-215ENST00000605031 ITPKCQ96DU7 683 aa9.37□□□□□ -0.91
FOCAD-215ENST00000605031 EMILIN1Q9Y6C2 1016 aa9.37□□□□□ -0.91
FOCAD-215ENST00000605031 UPP2O95045 317 aa9.36□□□□□ -0.91
FOCAD-215ENST00000605031 NR3C2P08235 984 aa9.36□□□□□ -0.91
FOCAD-215ENST00000605031 MEIOBQ8N635 442 aa9.36□□□□□ -0.91
FOCAD-215ENST00000605031 PURBQ96QR8 312 aaKnown RBP9.36□□□□□ -0.91
FOCAD-215ENST00000605031 VSIG8P0DPA2 414 aa9.35□□□□□ -0.91
FOCAD-215ENST00000605031 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
FOCAD-215ENST00000605031 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
FOCAD-215ENST00000605031 FSHRP23945 695 aa9.34□□□□□ -0.91
FOCAD-215ENST00000605031 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
FOCAD-215ENST00000605031 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
FOCAD-215ENST00000605031 GPSM3Q9Y4H4 160 aa9.34□□□□□ -0.91
FOCAD-215ENST00000605031 CCDC116Q8IYX3 515 aa9.33□□□□□ -0.92
FOCAD-215ENST00000605031 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
FOCAD-215ENST00000605031 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
FOCAD-215ENST00000605031 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
FOCAD-215ENST00000605031 ERFEQ4G0M1 354 aa9.32□□□□□ -0.92
FOCAD-215ENST00000605031 TSEN34Q9BSV6 310 aaKnown RBP9.32□□□□□ -0.92
FOCAD-215ENST00000605031 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
FOCAD-215ENST00000605031 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
FOCAD-215ENST00000605031 GMPRP36959 345 aa9.31□□□□□ -0.92
FOCAD-215ENST00000605031 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms