RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
TUBE1-208ENST00000604743 NUTM2GQ5VZR2 741 aa20.38■□□□□ 0.85
TUBE1-208ENST00000604743 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
TUBE1-208ENST00000604743 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
TUBE1-208ENST00000604743 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
TUBE1-208ENST00000604743 TRPC5Q9UL62 973 aaPredicted RBP20.35■□□□□ 0.85
TUBE1-208ENST00000604743 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
TUBE1-208ENST00000604743 RBM6P78332 1123 aaKnown RBP20.34■□□□□ 0.85
TUBE1-208ENST00000604743 ABTB2Q8N961 1025 aa20.34■□□□□ 0.85
TUBE1-208ENST00000604743 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.84
TUBE1-208ENST00000604743 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
TUBE1-208ENST00000604743 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
TUBE1-208ENST00000604743 PLCH1Q4KWH8 1693 aa20.32■□□□□ 0.84
TUBE1-208ENST00000604743 FAM83GA6ND36 823 aa20.31■□□□□ 0.84
TUBE1-208ENST00000604743 TMC1Q8TDI8 760 aa20.31■□□□□ 0.84
TUBE1-208ENST00000604743 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
TUBE1-208ENST00000604743 SLIT2O94813 1529 aa20.3■□□□□ 0.84
TUBE1-208ENST00000604743 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
TUBE1-208ENST00000604743 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
TUBE1-208ENST00000604743 ATRNO75882 1429 aa20.29■□□□□ 0.84
TUBE1-208ENST00000604743 USP6P35125 1406 aa20.29■□□□□ 0.84
TUBE1-208ENST00000604743 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.29■□□□□ 0.84
TUBE1-208ENST00000604743 USP47Q96K76 1375 aa20.29■□□□□ 0.84
TUBE1-208ENST00000604743 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
TUBE1-208ENST00000604743 TESK2Q96S53 571 aa20.27■□□□□ 0.84
TUBE1-208ENST00000604743 NWD2Q9ULI1 1742 aa20.27■□□□□ 0.83
TUBE1-208ENST00000604743 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
TUBE1-208ENST00000604743 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
TUBE1-208ENST00000604743 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
TUBE1-208ENST00000604743 BTG4Q9NY30 223 aa20.26■□□□□ 0.83
TUBE1-208ENST00000604743 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
TUBE1-208ENST00000604743 RGS12O14924 1447 aa20.26■□□□□ 0.83
TUBE1-208ENST00000604743 COL14A1Q05707 1796 aaKnown RBP20.26■□□□□ 0.83
TUBE1-208ENST00000604743 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-208ENST00000604743 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-208ENST00000604743 NLRP6P59044 892 aa20.25■□□□□ 0.83
TUBE1-208ENST00000604743 GJD4Q96KN9 370 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-208ENST00000604743 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
TUBE1-208ENST00000604743 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
TUBE1-208ENST00000604743 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
TUBE1-208ENST00000604743 KIAA0232Q92628 1395 aa20.23■□□□□ 0.83
TUBE1-208ENST00000604743 TTC21BQ7Z4L5 1316 aa20.23■□□□□ 0.83
TUBE1-208ENST00000604743 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
TUBE1-208ENST00000604743 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
TUBE1-208ENST00000604743 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
TUBE1-208ENST00000604743 PIK3C2AO00443 1686 aa20.22■□□□□ 0.83
TUBE1-208ENST00000604743 NRKQ7Z2Y5 1582 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 SSH2Q76I76 1423 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 TMF1P82094 1093 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
TUBE1-208ENST00000604743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
TUBE1-208ENST00000604743 NRAPQ86VF7 1730 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 USP19O94966 1318 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 GLI3P10071 1580 aa20.21■□□□□ 0.83
TUBE1-208ENST00000604743 GCP02774 474 aa20.2■□□□□ 0.82
TUBE1-208ENST00000604743 VPS72Q15906 364 aa20.2■□□□□ 0.82
TUBE1-208ENST00000604743 PUS7Q96PZ0 661 aaKnown RBP20.2■□□□□ 0.82
TUBE1-208ENST00000604743 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
TUBE1-208ENST00000604743 SOX12O15370 315 aa20.18■□□□□ 0.82
TUBE1-208ENST00000604743 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
TUBE1-208ENST00000604743 TERF2IPQ9NYB0 399 aa20.18■□□□□ 0.82
TUBE1-208ENST00000604743 TTC21AQ8NDW8 1320 aa20.18■□□□□ 0.82
TUBE1-208ENST00000604743 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
TUBE1-208ENST00000604743 A0A0G2JS52 829 aa20.15■□□□□ 0.82
TUBE1-208ENST00000604743 EVA1CP58658 441 aa20.15■□□□□ 0.82
TUBE1-208ENST00000604743 MYT1Q01538 1121 aa20.15■□□□□ 0.82
TUBE1-208ENST00000604743 ZRANB1Q9UGI0 708 aa20.15■□□□□ 0.82
TUBE1-208ENST00000604743 BRWD3Q6RI45 1802 aa20.14■□□□□ 0.81
TUBE1-208ENST00000604743 SLIT3O75094 1523 aa20.14■□□□□ 0.81
TUBE1-208ENST00000604743 NME9Q86XW9 330 aa20.14■□□□□ 0.81
TUBE1-208ENST00000604743 CPDO75976 1380 aa20.13■□□□□ 0.81
TUBE1-208ENST00000604743 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
TUBE1-208ENST00000604743 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
TUBE1-208ENST00000604743 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
TUBE1-208ENST00000604743 FAM98CQ17RN3 349 aaKnown RBP20.12■□□□□ 0.81
TUBE1-208ENST00000604743 SEPT12Q8IYM1 358 aa20.12■□□□□ 0.81
TUBE1-208ENST00000604743 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
TUBE1-208ENST00000604743 CAMTA1Q9Y6Y1 1673 aa20.11■□□□□ 0.81
TUBE1-208ENST00000604743 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
TUBE1-208ENST00000604743 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
TUBE1-208ENST00000604743 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
TUBE1-208ENST00000604743 LMO7Q8WWI1 1683 aa20.1■□□□□ 0.81
TUBE1-208ENST00000604743 SPATA31A5Q5VU36 1347 aa20.1■□□□□ 0.81
TUBE1-208ENST00000604743 SPATA31A7Q8IWB4 1347 aa20.1■□□□□ 0.81
TUBE1-208ENST00000604743 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
TUBE1-208ENST00000604743 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
TUBE1-208ENST00000604743 RGPD5Q99666 1765 aa20.08■□□□□ 0.81
TUBE1-208ENST00000604743 LARP1Q6PKG0 1096 aaKnown RBP20.07■□□□□ 0.8
TUBE1-208ENST00000604743 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
TUBE1-208ENST00000604743 ANKRD36BQ8N2N9 1353 aa20.07■□□□□ 0.8
TUBE1-208ENST00000604743 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
TUBE1-208ENST00000604743 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
TUBE1-208ENST00000604743 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
TUBE1-208ENST00000604743 COL18A1P39060 1754 aa20.06■□□□□ 0.8
TUBE1-208ENST00000604743 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
TUBE1-208ENST00000604743 USP54Q70EL1 1684 aa20.05■□□□□ 0.8
TUBE1-208ENST00000604743 NFAT5O94916 1531 aa20.04■□□□□ 0.8
TUBE1-208ENST00000604743 KRT27Q7Z3Y8 459 aa20.04■□□□□ 0.8
TUBE1-208ENST00000604743 AXIN2Q9Y2T1 843 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms