RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 NME9Q86XW9 330 aa19.72■□□□□ 0.75
CCDC12-211ENST00000604367 CPSF1Q10570 1443 aaKnown RBP19.72■□□□□ 0.75
CCDC12-211ENST00000604367 NKTRP30414 1462 aaKnown RBP19.72■□□□□ 0.75
CCDC12-211ENST00000604367 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
CCDC12-211ENST00000604367 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
CCDC12-211ENST00000604367 SLIT1O75093 1534 aa19.7■□□□□ 0.74
CCDC12-211ENST00000604367 PTPRUQ92729 1446 aa19.7■□□□□ 0.74
CCDC12-211ENST00000604367 ZRANB1Q9UGI0 708 aa19.7■□□□□ 0.74
CCDC12-211ENST00000604367 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
CCDC12-211ENST00000604367 COL3A1P02461 1466 aaPredicted RBP19.69■□□□□ 0.74
CCDC12-211ENST00000604367 ARHGAP23Q9P227 1491 aa19.69■□□□□ 0.74
CCDC12-211ENST00000604367 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
CCDC12-211ENST00000604367 DIAPH1O60610 1272 aaKnown RBP19.68■□□□□ 0.74
CCDC12-211ENST00000604367 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
CCDC12-211ENST00000604367 POLKQ9UBT6 870 aa19.67■□□□□ 0.74
CCDC12-211ENST00000604367 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
CCDC12-211ENST00000604367 CDC42BPGQ6DT37 1551 aa19.66■□□□□ 0.74
CCDC12-211ENST00000604367 BCAR3O75815 825 aa19.66■□□□□ 0.74
CCDC12-211ENST00000604367 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
CCDC12-211ENST00000604367 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.65■□□□□ 0.74
CCDC12-211ENST00000604367 PNPLA6Q8IY17 1366 aa19.65■□□□□ 0.74
CCDC12-211ENST00000604367 PLEKHF1Q96S99 279 aa19.64■□□□□ 0.74
CCDC12-211ENST00000604367 EMILIN1Q9Y6C2 1016 aa19.64■□□□□ 0.74
CCDC12-211ENST00000604367 MAPK8IP3Q9UPT6 1336 aa19.64■□□□□ 0.73
CCDC12-211ENST00000604367 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
CCDC12-211ENST00000604367 COG3Q96JB2 828 aa19.64■□□□□ 0.73
CCDC12-211ENST00000604367 WDR63Q8IWG1 891 aa19.63■□□□□ 0.73
CCDC12-211ENST00000604367 ZNF692Q9BU19 519 aaPredicted RBP19.63■□□□□ 0.73
CCDC12-211ENST00000604367 RIMS1Q86UR5 1692 aaKnown RBP19.63■□□□□ 0.73
CCDC12-211ENST00000604367 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
CCDC12-211ENST00000604367 ACEP12821 1306 aa19.62■□□□□ 0.73
CCDC12-211ENST00000604367 MON2Q7Z3U7 1717 aa19.62■□□□□ 0.73
CCDC12-211ENST00000604367 ITSN1Q15811 1721 aa19.61■□□□□ 0.73
CCDC12-211ENST00000604367 ADGRB2O60241 1585 aa19.61■□□□□ 0.73
CCDC12-211ENST00000604367 TMPOP42166 694 aaKnown RBP19.61■□□□□ 0.73
CCDC12-211ENST00000604367 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
CCDC12-211ENST00000604367 CEP170BQ9Y4F5 1589 aaPredicted RBP19.6■□□□□ 0.73
CCDC12-211ENST00000604367 AKAP12Q02952 1782 aa19.6■□□□□ 0.73
CCDC12-211ENST00000604367 PMFBP1Q8TBY8 1022 aa19.59■□□□□ 0.73
CCDC12-211ENST00000604367 HMOX1P09601 288 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 KCNA6P17658 529 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 TTC21BQ7Z4L5 1316 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 RIPK4P57078 832 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 TRIM35Q9UPQ4 493 aa19.57■□□□□ 0.72
CCDC12-211ENST00000604367 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
CCDC12-211ENST00000604367 MYH16Q9H6N6 1097 aa19.56■□□□□ 0.72
CCDC12-211ENST00000604367 FCHSD2O94868 740 aa19.56■□□□□ 0.72
CCDC12-211ENST00000604367 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
CCDC12-211ENST00000604367 PNNQ9H307 717 aaKnown RBP19.56■□□□□ 0.72
CCDC12-211ENST00000604367 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
CCDC12-211ENST00000604367 DIP2AQ14689 1571 aa19.55■□□□□ 0.72
CCDC12-211ENST00000604367 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
CCDC12-211ENST00000604367 AATKQ6ZMQ8 1374 aa19.55■□□□□ 0.72
CCDC12-211ENST00000604367 FRAT1Q92837 279 aaPredicted RBP19.54■□□□□ 0.72
CCDC12-211ENST00000604367 BCL2L13Q9BXK5 485 aa19.54■□□□□ 0.72
CCDC12-211ENST00000604367 RSPH6AQ9H0K4 717 aa19.54■□□□□ 0.72
CCDC12-211ENST00000604367 TOPAZ1Q8N9V7 1692 aa19.54■□□□□ 0.72
CCDC12-211ENST00000604367 LRRC7Q96NW7 1537 aa19.54■□□□□ 0.72
CCDC12-211ENST00000604367 IL13P35225 146 aa19.53■□□□□ 0.72
CCDC12-211ENST00000604367 ANKLE2Q86XL3 938 aa19.53■□□□□ 0.72
CCDC12-211ENST00000604367 USP6P35125 1406 aa19.53■□□□□ 0.72
CCDC12-211ENST00000604367 SOX12O15370 315 aa19.53■□□□□ 0.72
CCDC12-211ENST00000604367 NEFMP07197 916 aa19.53■□□□□ 0.72
CCDC12-211ENST00000604367 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
CCDC12-211ENST00000604367 CDK12Q9NYV4 1490 aaPredicted RBP19.52■□□□□ 0.72
CCDC12-211ENST00000604367 NGDNQ8NEJ9 315 aaKnown RBP19.52■□□□□ 0.71
CCDC12-211ENST00000604367 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
CCDC12-211ENST00000604367 PHACTR3Q96KR7 559 aa19.51■□□□□ 0.71
CCDC12-211ENST00000604367 XRN1Q8IZH2 1706 aaKnown RBP19.5■□□□□ 0.71
CCDC12-211ENST00000604367 RGPD8O14715 1765 aaPredicted RBP19.5■□□□□ 0.71
CCDC12-211ENST00000604367 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
CCDC12-211ENST00000604367 NRKQ7Z2Y5 1582 aa19.5■□□□□ 0.71
CCDC12-211ENST00000604367 PANK1Q8TE04 598 aa19.5■□□□□ 0.71
CCDC12-211ENST00000604367 SKAP1Q86WV1 359 aa19.49■□□□□ 0.71
CCDC12-211ENST00000604367 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
CCDC12-211ENST00000604367 EXOSC9Q06265 439 aaKnown RBP19.48■□□□□ 0.71
CCDC12-211ENST00000604367 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
CCDC12-211ENST00000604367 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
CCDC12-211ENST00000604367 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
CCDC12-211ENST00000604367 COG6Q9Y2V7 657 aa19.47■□□□□ 0.71
CCDC12-211ENST00000604367 PIK3R4Q99570 1358 aa19.47■□□□□ 0.71
CCDC12-211ENST00000604367 ERICH6Q7L0X2 663 aa19.45■□□□□ 0.7
CCDC12-211ENST00000604367 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
CCDC12-211ENST00000604367 SSH2Q76I76 1423 aa19.45■□□□□ 0.7
CCDC12-211ENST00000604367 NFE2L2Q16236 605 aa19.44■□□□□ 0.7
CCDC12-211ENST00000604367 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
CCDC12-211ENST00000604367 LAS1LQ9Y4W2 734 aaKnown RBP19.44■□□□□ 0.7
CCDC12-211ENST00000604367 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
CCDC12-211ENST00000604367 KDM2BQ8NHM5 1336 aa19.44■□□□□ 0.7
CCDC12-211ENST00000604367 IL16Q14005 1332 aa19.43■□□□□ 0.7
CCDC12-211ENST00000604367 EIF4A2Q14240 407 aaKnown RBP19.43■□□□□ 0.7
CCDC12-211ENST00000604367 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
CCDC12-211ENST00000604367 CLUAP1Q96AJ1 413 aa19.43■□□□□ 0.7
CCDC12-211ENST00000604367 ZNF142P52746 1687 aaPredicted RBP19.43■□□□□ 0.7
CCDC12-211ENST00000604367 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
CCDC12-211ENST00000604367 TCERG1O14776 1098 aaKnown RBP19.42■□□□□ 0.7
CCDC12-211ENST00000604367 CENPQQ7L2Z9 268 aaPredicted RBP19.42■□□□□ 0.7
CCDC12-211ENST00000604367 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms