RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CFAP53Q96M91 514 aa16.45■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 ACEP12821 1306 aa16.45■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 CDK12Q9NYV4 1490 aaPredicted RBP16.44■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 TRPM3Q9HCF6 1732 aaPredicted RBP16.41■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
NEDD8-MDP1-203ENST00000604306 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 COG3Q96JB2 828 aa16.39■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 MST1RQ04912 1400 aa16.38■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 MTHFSP49914 203 aa16.38■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 PDE3BQ13370 1112 aa16.38■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 HSPA2P54652 639 aa16.37■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 KIF24Q5T7B8 1368 aa16.37■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 TMEM94Q12767 1356 aa16.36■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 NME9Q86XW9 330 aa16.34■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 MSH6P52701 1360 aa16.34■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 RGPD1P0DJD0 1748 aa16.33■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 LTN1O94822 1766 aa16.33■□□□□ 0.21
NEDD8-MDP1-203ENST00000604306 C14orf37Q86TY3 774 aa16.33■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 PEAK1Q9H792 1746 aa16.32■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 SLIT3O75094 1523 aa16.3■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 ATF3P18847 181 aa16.29■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 NFAT5O94916 1531 aa16.28■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 ZNF521Q96K83 1311 aa16.27■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 ABCC6O95255 1503 aa16.27■□□□□ 0.2
NEDD8-MDP1-203ENST00000604306 CRYBG1Q9Y4K1 1723 aa16.27■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 MED1Q15648 1581 aaPredicted RBP16.26■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 NHSL1Q5SYE7 1610 aa16.26■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 FLT4P35916 1363 aa16.26■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 CCDC27Q2M243 656 aa16.25■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 FCHSD2O94868 740 aa16.24■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 DLG5Q8TDM6 1919 aa16.23■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 PSME1Q06323 249 aa16.23■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 PXDNQ92626 1479 aa16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 KCNH5Q8NCM2 988 aa16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 EMILIN1Q9Y6C2 1016 aa16.22■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 USP19O94966 1318 aa16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 IL13P35225 146 aa16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 NLRP6P59044 892 aa16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
NEDD8-MDP1-203ENST00000604306 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 ORAI2Q96SN7 254 aa16.2■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 APAF1O14727 1248 aa16.19■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 MAPK8IP3Q9UPT6 1336 aa16.18■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 ABCA3Q99758 1704 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 U2SURPO15042 1029 aaKnown RBP16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 KRT28Q7Z3Y7 464 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 TCP11L2Q8N4U5 519 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 KDRP35968 1356 aa16.16■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 FOXO3O43524 673 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms