RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 ARID4BQ4LE39 1312 aaPredicted RBP4.6□□□□□ -1.67
VCAM1-205ENST00000603679 LTKP29376 864 aa4.6□□□□□ -1.67
VCAM1-205ENST00000603679 NPM2Q86SE8 214 aaKnown RBP4.6□□□□□ -1.67
VCAM1-205ENST00000603679 C5P01031 1676 aa4.6□□□□□ -1.67
VCAM1-205ENST00000603679 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.6□□□□□ -1.67
VCAM1-205ENST00000603679 TOGARAM1Q9Y4F4 1720 aa4.6□□□□□ -1.67
VCAM1-205ENST00000603679 RPGRIP1LQ68CZ1 1315 aa4.6□□□□□ -1.67
VCAM1-205ENST00000603679 MAP2P11137 1827 aaKnown RBP4.6□□□□□ -1.67
VCAM1-205ENST00000603679 VIRMAQ69YN4 1812 aaKnown RBP4.6□□□□□ -1.67
VCAM1-205ENST00000603679 ANKRD30AQ9BXX3 1397 aa4.59□□□□□ -1.67
VCAM1-205ENST00000603679 NAIPQ13075 1403 aa4.59□□□□□ -1.67
VCAM1-205ENST00000603679 KANK1Q14678 1352 aa4.59□□□□□ -1.67
VCAM1-205ENST00000603679 P3H3Q8IVL6 736 aa4.59□□□□□ -1.68
VCAM1-205ENST00000603679 U3KPZ7 1027 aaPredicted RBP4.58□□□□□ -1.68
VCAM1-205ENST00000603679 SUPT5HO00267 1087 aaKnown RBP4.58□□□□□ -1.68
VCAM1-205ENST00000603679 ABCC11Q96J66 1382 aa4.58□□□□□ -1.68
VCAM1-205ENST00000603679 WDR90Q96KV7 1748 aa4.57□□□□□ -1.68
VCAM1-205ENST00000603679 C11orf95C9JLR9 678 aaPredicted RBP4.57□□□□□ -1.68
VCAM1-205ENST00000603679 TNS3Q68CZ2 1445 aa4.57□□□□□ -1.68
VCAM1-205ENST00000603679 ANKRD50Q9ULJ7 1429 aa4.57□□□□□ -1.68
VCAM1-205ENST00000603679 BTAF1O14981 1849 aa4.56□□□□□ -1.68
VCAM1-205ENST00000603679 TTBK1Q5TCY1 1321 aaPredicted RBP4.56□□□□□ -1.68
VCAM1-205ENST00000603679 DICER1Q9UPY3 1922 aaKnown RBP4.56□□□□□ -1.68
VCAM1-205ENST00000603679 CPDO75976 1380 aa4.56□□□□□ -1.68
VCAM1-205ENST00000603679 BRPF1P55201 1214 aaPredicted RBP4.56□□□□□ -1.68
VCAM1-205ENST00000603679 RBM6P78332 1123 aaKnown RBP4.56□□□□□ -1.68
VCAM1-205ENST00000603679 CFDP1Q9UEE9 299 aaPredicted RBP4.56□□□□□ -1.68
VCAM1-205ENST00000603679 RBBP6Q7Z6E9 1792 aaKnown RBP4.56□□□□□ -1.68
VCAM1-205ENST00000603679 NFAT5O94916 1531 aa4.56□□□□□ -1.68
VCAM1-205ENST00000603679 RGPD5Q99666 1765 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 C19orf44Q9H6X5 657 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 LRPPRCP42704 1394 aaKnown RBP4.55□□□□□ -1.68
VCAM1-205ENST00000603679 LTN1O94822 1766 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 NCAPD2Q15021 1401 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 SSH2Q76I76 1423 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 RYDENQ9NUL5 291 aaKnown RBP4.55□□□□□ -1.68
VCAM1-205ENST00000603679 ZBTB47Q9UFB7 747 aaPredicted RBP4.55□□□□□ -1.68
VCAM1-205ENST00000603679 DCAF8L1A6NGE4 600 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 CADPS2Q86UW7 1296 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 DUOX1Q9NRD9 1551 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 UBR3Q6ZT12 1888 aa4.55□□□□□ -1.68
VCAM1-205ENST00000603679 EIF5BO60841 1220 aaKnown RBP4.54□□□□□ -1.68
VCAM1-205ENST00000603679 HRCP23327 699 aa4.54□□□□□ -1.68
VCAM1-205ENST00000603679 SLAIN2Q9P270 581 aa4.54□□□□□ -1.68
VCAM1-205ENST00000603679 ADAMTSL1Q8N6G6 1762 aa4.54□□□□□ -1.68
VCAM1-205ENST00000603679 TRIM26Q12899 539 aaPredicted RBP4.54□□□□□ -1.68
VCAM1-205ENST00000603679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.54□□□□□ -1.68
VCAM1-205ENST00000603679 POLR3AO14802 1390 aaPredicted RBP4.54□□□□□ -1.68
VCAM1-205ENST00000603679 ADCY9O60503 1353 aa4.54□□□□□ -1.68
VCAM1-205ENST00000603679 HNRNPMP52272 730 aaKnown RBP eCLIP4.53□□□□□ -1.68
VCAM1-205ENST00000603679 BRINP3Q76B58 766 aa4.53□□□□□ -1.68
VCAM1-205ENST00000603679 EIF3AQ14152 1382 aaKnown RBP4.53□□□□□ -1.68
VCAM1-205ENST00000603679 PXDNLA1KZ92 1463 aa4.53□□□□□ -1.68
VCAM1-205ENST00000603679 WASHC2CQ9Y4E1 1318 aa4.53□□□□□ -1.68
VCAM1-205ENST00000603679 HDGFP51858 240 aaKnown RBP4.52□□□□□ -1.69
VCAM1-205ENST00000603679 FBXO31Q5XUX0 539 aaPredicted RBP4.52□□□□□ -1.69
VCAM1-205ENST00000603679 LMOD2Q6P5Q4 547 aa4.52□□□□□ -1.69
VCAM1-205ENST00000603679 GTPBP6O43824 516 aaPredicted RBP4.52□□□□□ -1.69
VCAM1-205ENST00000603679 PLCD3Q8N3E9 789 aa4.52□□□□□ -1.69
VCAM1-205ENST00000603679 ZMYND15Q9H091 742 aa4.52□□□□□ -1.69
VCAM1-205ENST00000603679 DHX57Q6P158 1386 aaKnown RBP4.52□□□□□ -1.69
VCAM1-205ENST00000603679 C4AP0C0L4 1744 aa4.51□□□□□ -1.69
VCAM1-205ENST00000603679 C4BP0C0L5 1744 aa4.51□□□□□ -1.69
VCAM1-205ENST00000603679 STAC3Q96MF2 364 aa4.51□□□□□ -1.69
VCAM1-205ENST00000603679 RSPH6AQ9H0K4 717 aa4.51□□□□□ -1.69
VCAM1-205ENST00000603679 ARHGEF10O15013 1369 aa4.51□□□□□ -1.69
VCAM1-205ENST00000603679 UBTFP17480 764 aaKnown RBP4.51□□□□□ -1.69
VCAM1-205ENST00000603679 UBR2Q8IWV8 1755 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 ZBTB12Q9Y330 459 aaPredicted RBP4.5□□□□□ -1.69
VCAM1-205ENST00000603679 VPS72Q15906 364 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 EID1Q9Y6B2 187 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 KIF20BQ96Q89 1820 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 METP08581 1390 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 ITGB4P16144 1822 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 CIZ1Q9ULV3 898 aaPredicted RBP4.5□□□□□ -1.69
VCAM1-205ENST00000603679 ANKRD30BQ9BXX2 1392 aa4.5□□□□□ -1.69
VCAM1-205ENST00000603679 IDI1Q13907 227 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 LRRC59Q96AG4 307 aaKnown RBP4.49□□□□□ -1.69
VCAM1-205ENST00000603679 SIPA1L3O60292 1781 aaPredicted RBP4.49□□□□□ -1.69
VCAM1-205ENST00000603679 PLEKHG5O94827 1062 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 RXRBP28702 533 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 ESF1Q9H501 851 aaKnown RBP4.49□□□□□ -1.69
VCAM1-205ENST00000603679 USP19O94966 1318 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 ZNF644Q9H582 1327 aaPredicted RBP4.49□□□□□ -1.69
VCAM1-205ENST00000603679 DOT1LQ8TEK3 1739 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 SBF1O95248 1867 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 ROBO2Q9HCK4 1378 aa4.49□□□□□ -1.69
VCAM1-205ENST00000603679 GSE1Q14687 1217 aa4.48□□□□□ -1.69
VCAM1-205ENST00000603679 NEUROD2Q15784 382 aa4.48□□□□□ -1.69
VCAM1-205ENST00000603679 BCORQ6W2J9 1755 aa4.48□□□□□ -1.69
VCAM1-205ENST00000603679 TRPC5Q9UL62 973 aaPredicted RBP4.48□□□□□ -1.69
VCAM1-205ENST00000603679 CCDC9Q9Y3X0 531 aaKnown RBP4.48□□□□□ -1.69
VCAM1-205ENST00000603679 KIF3BO15066 747 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 SPATA31A3Q5VYP0 1347 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 NKX1-1Q15270 411 aaPredicted RBP4.47□□□□□ -1.69
VCAM1-205ENST00000603679 TXNDC2Q86VQ3 553 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 SGIP1Q9BQI5 828 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 KANK4Q5T7N3 995 aaPredicted RBP4.47□□□□□ -1.69
VCAM1-205ENST00000603679 BARGINQ6ZT62 677 aa4.47□□□□□ -1.69
VCAM1-205ENST00000603679 MIER1Q8N108 512 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms