RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
TUBE1-205ENST00000603651 SH3BP2P78314 561 aa12.12□□□□□ -0.47
TUBE1-205ENST00000603651 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
TUBE1-205ENST00000603651 J3QL48 77 aa12.11□□□□□ -0.47
TUBE1-205ENST00000603651 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
TUBE1-205ENST00000603651 HELBQ8NG08 1087 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-205ENST00000603651 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
TUBE1-205ENST00000603651 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
TUBE1-205ENST00000603651 ALDH1A1P00352 501 aa12.09□□□□□ -0.47
TUBE1-205ENST00000603651 SMPD1P17405 629 aa12.08□□□□□ -0.48
TUBE1-205ENST00000603651 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
TUBE1-205ENST00000603651 ZNF787Q6DD87 383 aa12.07□□□□□ -0.48
TUBE1-205ENST00000603651 ZNF511Q8NB15 262 aa12.07□□□□□ -0.48
TUBE1-205ENST00000603651 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
TUBE1-205ENST00000603651 FBXO31Q5XUX0 539 aaPredicted RBP12.05□□□□□ -0.48
TUBE1-205ENST00000603651 AAASQ9NRG9 546 aa12.05□□□□□ -0.48
TUBE1-205ENST00000603651 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
TUBE1-205ENST00000603651 AGERQ15109 404 aa12.04□□□□□ -0.48
TUBE1-205ENST00000603651 AXIN1O15169 862 aa12.03□□□□□ -0.48
TUBE1-205ENST00000603651 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
TUBE1-205ENST00000603651 FOXJ1Q92949 421 aa12.03□□□□□ -0.48
TUBE1-205ENST00000603651 AP1G2O75843 785 aa12.02□□□□□ -0.49
TUBE1-205ENST00000603651 HPS1Q92902 700 aa12.02□□□□□ -0.49
TUBE1-205ENST00000603651 DACH1Q9UI36 760 aa12.02□□□□□ -0.49
TUBE1-205ENST00000603651 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.49
TUBE1-205ENST00000603651 WASF2Q9Y6W5 498 aa12.02□□□□□ -0.49
TUBE1-205ENST00000603651 POTECB2RU33 542 aa12□□□□□ -0.49
TUBE1-205ENST00000603651 LRRN4Q8WUT4 740 aa12□□□□□ -0.49
TUBE1-205ENST00000603651 SIAH2O43255 324 aa11.99□□□□□ -0.49
TUBE1-205ENST00000603651 AVPP01185 164 aa11.99□□□□□ -0.49
TUBE1-205ENST00000603651 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
TUBE1-205ENST00000603651 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
TUBE1-205ENST00000603651 ARID5BQ14865 1188 aa11.98□□□□□ -0.49
TUBE1-205ENST00000603651 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
TUBE1-205ENST00000603651 VARSP26640 1264 aaKnown RBP11.97□□□□□ -0.49
TUBE1-205ENST00000603651 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.49
TUBE1-205ENST00000603651 CTC1Q2NKJ3 1217 aa11.95□□□□□ -0.5
TUBE1-205ENST00000603651 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
TUBE1-205ENST00000603651 MAGEB6P1A0A0J9YX57 407 aa11.94□□□□□ -0.5
TUBE1-205ENST00000603651 NR6A1Q15406 480 aa11.94□□□□□ -0.5
TUBE1-205ENST00000603651 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
TUBE1-205ENST00000603651 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
TUBE1-205ENST00000603651 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
TUBE1-205ENST00000603651 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
TUBE1-205ENST00000603651 GMPR2Q9P2T1 348 aaKnown RBP11.93□□□□□ -0.5
TUBE1-205ENST00000603651 RFC5P40937 340 aa11.92□□□□□ -0.5
TUBE1-205ENST00000603651 C4orf48Q5BLP8 95 aa11.92□□□□□ -0.5
TUBE1-205ENST00000603651 BPHLQ86WA6 291 aaPredicted RBP11.92□□□□□ -0.5
TUBE1-205ENST00000603651 SMCPP49901 116 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-205ENST00000603651 USP17L8P0C7I0 530 aa11.9□□□□□ -0.5
TUBE1-205ENST00000603651 NNTQ13423 1086 aa11.89□□□□□ -0.51
TUBE1-205ENST00000603651 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
TUBE1-205ENST00000603651 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
TUBE1-205ENST00000603651 CAPN5O15484 640 aaPredicted RBP11.88□□□□□ -0.51
TUBE1-205ENST00000603651 EPS8L1Q8TE68 723 aa11.87□□□□□ -0.51
TUBE1-205ENST00000603651 HMX1Q9NP08 348 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-205ENST00000603651 FKBPLQ9UIM3 349 aa11.87□□□□□ -0.51
TUBE1-205ENST00000603651 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
TUBE1-205ENST00000603651 BMP1P13497 986 aa11.85□□□□□ -0.51
TUBE1-205ENST00000603651 ADH1CP00326 375 aa11.84□□□□□ -0.51
TUBE1-205ENST00000603651 SH3BP5LQ7L8J4 393 aa11.84□□□□□ -0.51
TUBE1-205ENST00000603651 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
TUBE1-205ENST00000603651 ARHGAP9Q9BRR9 750 aa11.84□□□□□ -0.51
TUBE1-205ENST00000603651 WDR4P57081 412 aaKnown RBP11.83□□□□□ -0.52
TUBE1-205ENST00000603651 VASH1Q7L8A9 365 aaPredicted RBP11.82□□□□□ -0.52
TUBE1-205ENST00000603651 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
TUBE1-205ENST00000603651 GPKOWQ92917 476 aaPredicted RBP eCLIP11.82□□□□□ -0.52
TUBE1-205ENST00000603651 FSHRP23945 695 aa11.81□□□□□ -0.52
TUBE1-205ENST00000603651 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
TUBE1-205ENST00000603651 MPNDQ8N594 471 aa11.81□□□□□ -0.52
TUBE1-205ENST00000603651 CDK15Q96Q40 435 aa11.81□□□□□ -0.52
TUBE1-205ENST00000603651 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
TUBE1-205ENST00000603651 TMEM259Q4ZIN3 620 aa11.8□□□□□ -0.52
TUBE1-205ENST00000603651 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
TUBE1-205ENST00000603651 C1QTNF2Q9BXJ5 285 aa11.8□□□□□ -0.52
TUBE1-205ENST00000603651 NR3C2P08235 984 aa11.79□□□□□ -0.52
TUBE1-205ENST00000603651 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
TUBE1-205ENST00000603651 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
TUBE1-205ENST00000603651 TIMP2P16035 220 aa11.78□□□□□ -0.52
TUBE1-205ENST00000603651 GRM5P41594 1212 aa11.78□□□□□ -0.52
TUBE1-205ENST00000603651 TRIM46Q7Z4K8 759 aa11.78□□□□□ -0.52
TUBE1-205ENST00000603651 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
TUBE1-205ENST00000603651 ZIC2O95409 532 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-205ENST00000603651 PTK2Q05397 1052 aa11.77□□□□□ -0.53
TUBE1-205ENST00000603651 NR5A1Q13285 461 aa11.77□□□□□ -0.53
TUBE1-205ENST00000603651 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
TUBE1-205ENST00000603651 SENP2Q9HC62 589 aa11.77□□□□□ -0.53
TUBE1-205ENST00000603651 ITPKCQ96DU7 683 aa11.76□□□□□ -0.53
TUBE1-205ENST00000603651 TRIM47Q96LD4 638 aa11.75□□□□□ -0.53
TUBE1-205ENST00000603651 ZC3H4Q9UPT8 1303 aaKnown RBP11.75□□□□□ -0.53
TUBE1-205ENST00000603651 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
TUBE1-205ENST00000603651 ADAM32Q8TC27 787 aa11.74□□□□□ -0.53
TUBE1-205ENST00000603651 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
TUBE1-205ENST00000603651 RAB15P59190 212 aa11.73□□□□□ -0.53
TUBE1-205ENST00000603651 KIFC2Q96AC6 838 aa11.72□□□□□ -0.53
TUBE1-205ENST00000603651 PURBQ96QR8 312 aaKnown RBP11.72□□□□□ -0.53
TUBE1-205ENST00000603651 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
TUBE1-205ENST00000603651 MAP4K5Q9Y4K4 846 aa11.72□□□□□ -0.53
TUBE1-205ENST00000603651 SCARF1Q14162 830 aa11.71□□□□□ -0.53
TUBE1-205ENST00000603651 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms