RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 SMG6Q86US8 1419 aaKnown RBP29.6■■■□□ 2.33
PPFIA3-211ENST00000602848 XIRP1Q702N8 1843 aaKnown RBP29.6■■■□□ 2.33
PPFIA3-211ENST00000602848 NALCNQ8IZF0 1738 aa29.6■■■□□ 2.33
PPFIA3-211ENST00000602848 NRKQ7Z2Y5 1582 aa29.59■■■□□ 2.33
PPFIA3-211ENST00000602848 TTC21BQ7Z4L5 1316 aa29.58■■■□□ 2.33
PPFIA3-211ENST00000602848 AATKQ6ZMQ8 1374 aa29.58■■■□□ 2.33
PPFIA3-211ENST00000602848 TTC21AQ8NDW8 1320 aa29.57■■■□□ 2.32
PPFIA3-211ENST00000602848 COG3Q96JB2 828 aa29.57■■■□□ 2.32
PPFIA3-211ENST00000602848 SHPRHQ149N8 1683 aa29.57■■■□□ 2.32
PPFIA3-211ENST00000602848 SSH2Q76I76 1423 aa29.57■■■□□ 2.32
PPFIA3-211ENST00000602848 NUTM2FA1L443 756 aa29.56■■■□□ 2.32
PPFIA3-211ENST00000602848 PNPLA6Q8IY17 1366 aa29.55■■■□□ 2.32
PPFIA3-211ENST00000602848 NME9Q86XW9 330 aa29.55■■■□□ 2.32
PPFIA3-211ENST00000602848 NCOA3Q9Y6Q9 1424 aa29.53■■■□□ 2.32
PPFIA3-211ENST00000602848 NGDNQ8NEJ9 315 aaKnown RBP29.53■■■□□ 2.32
PPFIA3-211ENST00000602848 NUDCQ9Y266 331 aa29.53■■■□□ 2.32
PPFIA3-211ENST00000602848 RGPD8O14715 1765 aaPredicted RBP29.53■■■□□ 2.32
PPFIA3-211ENST00000602848 CERKQ8TCT0 537 aa29.53■■■□□ 2.32
PPFIA3-211ENST00000602848 PROSER2Q86WR7 435 aaPredicted RBP29.52■■■□□ 2.32
PPFIA3-211ENST00000602848 TMEM94Q12767 1356 aa29.51■■■□□ 2.31
PPFIA3-211ENST00000602848 RBM33Q96EV2 1170 aaKnown RBP29.5■■■□□ 2.31
PPFIA3-211ENST00000602848 COL3A1P02461 1466 aaPredicted RBP29.5■■■□□ 2.31
PPFIA3-211ENST00000602848 PMFBP1Q8TBY8 1022 aa29.49■■■□□ 2.31
PPFIA3-211ENST00000602848 POLKQ9UBT6 870 aa29.49■■■□□ 2.31
PPFIA3-211ENST00000602848 IQSEC2Q5JU85 1478 aa29.48■■■□□ 2.31
PPFIA3-211ENST00000602848 NCBP3Q53F19 620 aaKnown RBP29.48■■■□□ 2.31
PPFIA3-211ENST00000602848 USP31Q70CQ4 1352 aa29.47■■■□□ 2.31
PPFIA3-211ENST00000602848 NEFLP07196 543 aa29.46■■■□□ 2.31
PPFIA3-211ENST00000602848 C14orf37Q86TY3 774 aa29.46■■■□□ 2.31
PPFIA3-211ENST00000602848 RUNDC1Q96C34 613 aa29.46■■■□□ 2.31
PPFIA3-211ENST00000602848 OVOS2A0A0J9YW53 1432 aa29.46■■■□□ 2.31
PPFIA3-211ENST00000602848 OVOS2Q6IE36 1432 aa29.46■■■□□ 2.31
PPFIA3-211ENST00000602848 PHF8Q9UPP1 1060 aa29.45■■■□□ 2.31
PPFIA3-211ENST00000602848 C19orf44Q9H6X5 657 aa29.45■■■□□ 2.3
PPFIA3-211ENST00000602848 DIAPH1O60610 1272 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-211ENST00000602848 MAP2P11137 1827 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-211ENST00000602848 PNNQ9H307 717 aaKnown RBP29.42■■■□□ 2.3
PPFIA3-211ENST00000602848 ZRANB1Q9UGI0 708 aa29.42■■■□□ 2.3
PPFIA3-211ENST00000602848 CDK12Q9NYV4 1490 aaPredicted RBP29.42■■■□□ 2.3
PPFIA3-211ENST00000602848 ZNF521Q96K83 1311 aa29.41■■■□□ 2.3
PPFIA3-211ENST00000602848 CCDC146Q8IYE0 955 aa29.41■■■□□ 2.3
PPFIA3-211ENST00000602848 SUPT16HQ9Y5B9 1047 aaKnown RBP29.41■■■□□ 2.3
PPFIA3-211ENST00000602848 U2AF1L5P0DN76 240 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-211ENST00000602848 U2AF1Q01081 240 aaKnown RBP eCLIP29.4■■■□□ 2.3
PPFIA3-211ENST00000602848 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-211ENST00000602848 DCCP43146 1447 aa29.39■■■□□ 2.3
PPFIA3-211ENST00000602848 APAF1O14727 1248 aa29.39■■■□□ 2.3
PPFIA3-211ENST00000602848 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
PPFIA3-211ENST00000602848 SENP3-EIF4A1A0A087X0R7 540 aa29.36■■■□□ 2.29
PPFIA3-211ENST00000602848 ESCO1Q5FWF5 840 aa29.34■■■□□ 2.29
PPFIA3-211ENST00000602848 GOLGA2Q08379 1002 aa29.34■■■□□ 2.29
PPFIA3-211ENST00000602848 EMILIN1Q9Y6C2 1016 aa29.34■■■□□ 2.29
PPFIA3-211ENST00000602848 U2SURPO15042 1029 aaKnown RBP29.32■■■□□ 2.28
PPFIA3-211ENST00000602848 FCHSD2O94868 740 aa29.32■■■□□ 2.28
PPFIA3-211ENST00000602848 PIK3C2AO00443 1686 aa29.32■■■□□ 2.28
PPFIA3-211ENST00000602848 PPM1GO15355 546 aaPredicted RBP29.31■■■□□ 2.28
PPFIA3-211ENST00000602848 CCDC27Q2M243 656 aa29.31■■■□□ 2.28
PPFIA3-211ENST00000602848 MSH6P52701 1360 aa29.31■■■□□ 2.28
PPFIA3-211ENST00000602848 ATF3P18847 181 aa29.31■■■□□ 2.28
PPFIA3-211ENST00000602848 ERICH6BQ5W0A0 696 aa29.31■■■□□ 2.28
PPFIA3-211ENST00000602848 TCP11L2Q8N4U5 519 aa29.31■■■□□ 2.28
PPFIA3-211ENST00000602848 KIF1AQ12756 1690 aa29.3■■■□□ 2.28
PPFIA3-211ENST00000602848 C1orf167Q5SNV9 1468 aa29.3■■■□□ 2.28
PPFIA3-211ENST00000602848 FBLN1P23142 703 aa29.3■■■□□ 2.28
PPFIA3-211ENST00000602848 PSME1Q06323 249 aa29.3■■■□□ 2.28
PPFIA3-211ENST00000602848 FKBP8Q14318 412 aa29.3■■■□□ 2.28
PPFIA3-211ENST00000602848 IL13P35225 146 aa29.29■■■□□ 2.28
PPFIA3-211ENST00000602848 CDCA7LQ96GN5 454 aa29.28■■■□□ 2.28
PPFIA3-211ENST00000602848 PLEKHF1Q96S99 279 aa29.28■■■□□ 2.28
PPFIA3-211ENST00000602848 RNF123Q5XPI4 1314 aa29.28■■■□□ 2.28
PPFIA3-211ENST00000602848 NLRP6P59044 892 aa29.27■■■□□ 2.28
PPFIA3-211ENST00000602848 RRS1Q15050 365 aaKnown RBP29.27■■■□□ 2.28
PPFIA3-211ENST00000602848 CADPS2Q86UW7 1296 aa29.27■■■□□ 2.28
PPFIA3-211ENST00000602848 PHF23Q9BUL5 403 aaPredicted RBP29.27■■■□□ 2.28
PPFIA3-211ENST00000602848 KIF24Q5T7B8 1368 aa29.27■■■□□ 2.28
PPFIA3-211ENST00000602848 ABTB2Q8N961 1025 aa29.26■■■□□ 2.27
PPFIA3-211ENST00000602848 SLFN5Q08AF3 891 aa29.25■■■□□ 2.27
PPFIA3-211ENST00000602848 TRMT2AQ8IZ69 625 aaKnown RBP29.25■■■□□ 2.27
PPFIA3-211ENST00000602848 E9PSI1 815 aa29.24■■■□□ 2.27
PPFIA3-211ENST00000602848 WWC1Q8IX03 1113 aa29.24■■■□□ 2.27
PPFIA3-211ENST00000602848 MAPK8IP3Q9UPT6 1336 aa29.24■■■□□ 2.27
PPFIA3-211ENST00000602848 WDR63Q8IWG1 891 aa29.23■■■□□ 2.27
PPFIA3-211ENST00000602848 ORAI2Q96SN7 254 aa29.23■■■□□ 2.27
PPFIA3-211ENST00000602848 MST1RQ04912 1400 aa29.23■■■□□ 2.27
PPFIA3-211ENST00000602848 PAK3O75914 559 aaPredicted RBP29.23■■■□□ 2.27
PPFIA3-211ENST00000602848 UBAP1LF5GYI3 381 aa29.22■■■□□ 2.27
PPFIA3-211ENST00000602848 NEFMP07197 916 aa29.22■■■□□ 2.27
PPFIA3-211ENST00000602848 SBNO1A3KN83 1393 aa29.22■■■□□ 2.27
PPFIA3-211ENST00000602848 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
PPFIA3-211ENST00000602848 RCAN3Q9UKA8 241 aa29.2■■■□□ 2.27
PPFIA3-211ENST00000602848 RSPH6AQ9H0K4 717 aa29.2■■■□□ 2.26
PPFIA3-211ENST00000602848 MARF1Q9Y4F3 1742 aaKnown RBP29.19■■■□□ 2.26
PPFIA3-211ENST00000602848 FLT4P35916 1363 aa29.19■■■□□ 2.26
PPFIA3-211ENST00000602848 TOM1O60784 492 aa29.19■■■□□ 2.26
PPFIA3-211ENST00000602848 MAP3K19Q56UN5 1328 aa29.18■■■□□ 2.26
PPFIA3-211ENST00000602848 TMPOP42166 694 aaKnown RBP29.16■■■□□ 2.26
PPFIA3-211ENST00000602848 KCNH5Q8NCM2 988 aa29.16■■■□□ 2.26
PPFIA3-211ENST00000602848 PEAK1Q9H792 1746 aa29.16■■■□□ 2.26
PPFIA3-211ENST00000602848 FOXO3O43524 673 aa29.16■■■□□ 2.26
PPFIA3-211ENST00000602848 KRT28Q7Z3Y7 464 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms