RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 CCDC61Q9Y6R9 512 aa30.63■■■□□ 2.49
PPFIA3-209ENST00000602783 BRWD3Q6RI45 1802 aa30.63■■■□□ 2.49
PPFIA3-209ENST00000602783 ITSN1Q15811 1721 aa30.62■■■□□ 2.49
PPFIA3-209ENST00000602783 A0A0G2JS52 829 aa30.61■■■□□ 2.49
PPFIA3-209ENST00000602783 MYT1Q01538 1121 aa30.61■■■□□ 2.49
PPFIA3-209ENST00000602783 ZRANB1Q9UGI0 708 aa30.61■■■□□ 2.49
PPFIA3-209ENST00000602783 ACEP12821 1306 aa30.6■■■□□ 2.49
PPFIA3-209ENST00000602783 KRT27Q7Z3Y8 459 aa30.6■■■□□ 2.49
PPFIA3-209ENST00000602783 NBPF8Q3BBV2 869 aa30.59■■■□□ 2.49
PPFIA3-209ENST00000602783 PRDM11Q9NQV5 511 aa30.59■■■□□ 2.49
PPFIA3-209ENST00000602783 BLMP54132 1417 aaPredicted RBP30.58■■■□□ 2.49
PPFIA3-209ENST00000602783 PLEKHG3A1L390 1219 aa30.58■■■□□ 2.49
PPFIA3-209ENST00000602783 FAM98CQ17RN3 349 aaKnown RBP30.58■■■□□ 2.49
PPFIA3-209ENST00000602783 NUTM2GQ5VZR2 741 aa30.58■■■□□ 2.49
PPFIA3-209ENST00000602783 COL14A1Q05707 1796 aaKnown RBP30.58■■■□□ 2.49
PPFIA3-209ENST00000602783 POLR3AO14802 1390 aaPredicted RBP30.56■■■□□ 2.48
PPFIA3-209ENST00000602783 CENPJQ9HC77 1338 aaPredicted RBP30.56■■■□□ 2.48
PPFIA3-209ENST00000602783 L3MBTL2Q969R5 705 aa30.56■■■□□ 2.48
PPFIA3-209ENST00000602783 NRAPQ86VF7 1730 aa30.56■■■□□ 2.48
PPFIA3-209ENST00000602783 SRPK2P78362 688 aaKnown RBP30.55■■■□□ 2.48
PPFIA3-209ENST00000602783 SF3B2Q13435 895 aaKnown RBP30.55■■■□□ 2.48
PPFIA3-209ENST00000602783 CRYBG1Q9Y4K1 1723 aa30.54■■■□□ 2.48
PPFIA3-209ENST00000602783 SIN3AQ96ST3 1273 aa30.54■■■□□ 2.48
PPFIA3-209ENST00000602783 KIAA0232Q92628 1395 aa30.53■■■□□ 2.48
PPFIA3-209ENST00000602783 SPATA31A5Q5VU36 1347 aa30.52■■■□□ 2.48
PPFIA3-209ENST00000602783 SPATA31A7Q8IWB4 1347 aa30.52■■■□□ 2.48
PPFIA3-209ENST00000602783 ZC3H6P61129 1189 aaKnown RBP30.52■■■□□ 2.48
PPFIA3-209ENST00000602783 CHRNA2Q15822 529 aa30.52■■■□□ 2.48
PPFIA3-209ENST00000602783 DEFB132Q7Z7B7 95 aa30.52■■■□□ 2.48
PPFIA3-209ENST00000602783 CABP2Q9NPB3 220 aa30.51■■■□□ 2.47
PPFIA3-209ENST00000602783 TOPAZ1Q8N9V7 1692 aa30.51■■■□□ 2.47
PPFIA3-209ENST00000602783 TRPM1Q7Z4N2 1603 aa30.51■■■□□ 2.47
PPFIA3-209ENST00000602783 ABTB2Q8N961 1025 aa30.5■■■□□ 2.47
PPFIA3-209ENST00000602783 NEUROD1Q13562 356 aa30.48■■■□□ 2.47
PPFIA3-209ENST00000602783 QRICH2Q9H0J4 1663 aa30.47■■■□□ 2.47
PPFIA3-209ENST00000602783 PPIP5K1Q6PFW1 1433 aa30.47■■■□□ 2.47
PPFIA3-209ENST00000602783 SRCAPQ6ZRS2 3230 aa30.46■■■□□ 2.47
PPFIA3-209ENST00000602783 STRN4Q9NRL3 753 aa30.46■■■□□ 2.47
PPFIA3-209ENST00000602783 PHRF1Q9P1Y6 1649 aaKnown RBP30.44■■■□□ 2.46
PPFIA3-209ENST00000602783 FAM182BQ5T319 152 aa30.42■■■□□ 2.46
PPFIA3-209ENST00000602783 CABP1Q9NZU7 370 aa30.42■■■□□ 2.46
PPFIA3-209ENST00000602783 SPATA31A1Q5TZJ5 1347 aa30.42■■■□□ 2.46
PPFIA3-209ENST00000602783 EVA1CP58658 441 aa30.41■■■□□ 2.46
PPFIA3-209ENST00000602783 NLRP13Q86W25 1043 aa30.41■■■□□ 2.46
PPFIA3-209ENST00000602783 BAG6P46379 1132 aa30.38■■■□□ 2.45
PPFIA3-209ENST00000602783 USP19O94966 1318 aa30.38■■■□□ 2.45
PPFIA3-209ENST00000602783 USP35Q9P2H5 1018 aa30.37■■■□□ 2.45
PPFIA3-209ENST00000602783 GCP02774 474 aa30.36■■■□□ 2.45
PPFIA3-209ENST00000602783 EVC2Q86UK5 1308 aa30.36■■■□□ 2.45
PPFIA3-209ENST00000602783 ROCK2O75116 1388 aaKnown RBP30.36■■■□□ 2.45
PPFIA3-209ENST00000602783 THSD7AQ9UPZ6 1657 aa30.34■■■□□ 2.45
PPFIA3-209ENST00000602783 BRD4O60885 1362 aaPredicted RBP30.34■■■□□ 2.45
PPFIA3-209ENST00000602783 CPDO75976 1380 aa30.34■■■□□ 2.45
PPFIA3-209ENST00000602783 NRKQ7Z2Y5 1582 aa30.33■■■□□ 2.45
PPFIA3-209ENST00000602783 SSH2Q76I76 1423 aa30.32■■■□□ 2.44
PPFIA3-209ENST00000602783 NLRP6P59044 892 aa30.32■■■□□ 2.44
PPFIA3-209ENST00000602783 LARP1Q6PKG0 1096 aaKnown RBP30.32■■■□□ 2.44
PPFIA3-209ENST00000602783 USP6P35125 1406 aa30.31■■■□□ 2.44
PPFIA3-209ENST00000602783 CAMTA1Q9Y6Y1 1673 aa30.31■■■□□ 2.44
PPFIA3-209ENST00000602783 TRIM26Q12899 539 aaPredicted RBP30.31■■■□□ 2.44
PPFIA3-209ENST00000602783 EN1Q05925 392 aaPredicted RBP30.29■■■□□ 2.44
PPFIA3-209ENST00000602783 BARGINQ6ZT62 677 aa30.29■■■□□ 2.44
PPFIA3-209ENST00000602783 ZBTB7CA1YPR0 619 aa30.28■■■□□ 2.44
PPFIA3-209ENST00000602783 FAM196AQ6ZSG2 479 aa30.26■■■□□ 2.43
PPFIA3-209ENST00000602783 TCP11L2Q8N4U5 519 aa30.26■■■□□ 2.43
PPFIA3-209ENST00000602783 LMO7Q8WWI1 1683 aa30.24■■■□□ 2.43
PPFIA3-209ENST00000602783 PDE3BQ13370 1112 aa30.24■■■□□ 2.43
PPFIA3-209ENST00000602783 ZNF692Q9BU19 519 aaPredicted RBP30.24■■■□□ 2.43
PPFIA3-209ENST00000602783 RGPD1P0DJD0 1748 aa30.23■■■□□ 2.43
PPFIA3-209ENST00000602783 TRIM37O94972 964 aa30.23■■■□□ 2.43
PPFIA3-209ENST00000602783 PSDA5PKW4 1024 aaPredicted RBP30.21■■■□□ 2.43
PPFIA3-209ENST00000602783 THRAP3Q9Y2W1 955 aaKnown RBP30.21■■■□□ 2.43
PPFIA3-209ENST00000602783 TONSLQ96HA7 1378 aa30.2■■■□□ 2.43
PPFIA3-209ENST00000602783 TTC21BQ7Z4L5 1316 aa30.2■■■□□ 2.42
PPFIA3-209ENST00000602783 COL5A2P05997 1499 aaPredicted RBP30.19■■■□□ 2.42
PPFIA3-209ENST00000602783 AATKQ6ZMQ8 1374 aa30.18■■■□□ 2.42
PPFIA3-209ENST00000602783 SLIT3O75094 1523 aa30.17■■■□□ 2.42
PPFIA3-209ENST00000602783 EZH2Q15910 746 aaKnown RBP30.17■■■□□ 2.42
PPFIA3-209ENST00000602783 CARD11Q9BXL7 1154 aa30.17■■■□□ 2.42
PPFIA3-209ENST00000602783 DISP2A7MBM2 1401 aa30.16■■■□□ 2.42
PPFIA3-209ENST00000602783 APBA3O96018 575 aa30.15■■■□□ 2.42
PPFIA3-209ENST00000602783 CRB1P82279 1406 aa30.14■■■□□ 2.42
PPFIA3-209ENST00000602783 PIK3C2AO00443 1686 aa30.14■■■□□ 2.42
PPFIA3-209ENST00000602783 CAMKK2Q96RR4 588 aa30.14■■■□□ 2.42
PPFIA3-209ENST00000602783 TNS1Q9HBL0 1735 aaKnown RBP30.13■■■□□ 2.41
PPFIA3-209ENST00000602783 TTC21AQ8NDW8 1320 aa30.13■■■□□ 2.41
PPFIA3-209ENST00000602783 SOX12O15370 315 aa30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 TOM1L2Q6ZVM7 507 aa30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 KCNH5Q8NCM2 988 aa30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 AXIN2Q9Y2T1 843 aa30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 AKAP12Q02952 1782 aa30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 KTN1Q86UP2 1357 aaKnown RBP30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 CPSF1Q10570 1443 aaKnown RBP30.12■■■□□ 2.41
PPFIA3-209ENST00000602783 R3HDM1Q15032 1099 aaKnown RBP30.1■■■□□ 2.41
PPFIA3-209ENST00000602783 ARHGEF25Q86VW2 580 aa30.1■■■□□ 2.41
PPFIA3-209ENST00000602783 SBNO2Q9Y2G9 1366 aa30.09■■■□□ 2.41
PPFIA3-209ENST00000602783 COL18A1P39060 1754 aa30.06■■■□□ 2.4
PPFIA3-209ENST00000602783 WDR17Q8IZU2 1322 aa30.06■■■□□ 2.4
PPFIA3-209ENST00000602783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.05■■■□□ 2.4
PPFIA3-209ENST00000602783 TMC1Q8TDI8 760 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms