RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
PPFIA3-207ENST00000602716 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
PPFIA3-207ENST00000602716 MST1RQ04912 1400 aa23.44■■□□□ 1.34
PPFIA3-207ENST00000602716 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
PPFIA3-207ENST00000602716 ORAI2Q96SN7 254 aa23.43■■□□□ 1.34
PPFIA3-207ENST00000602716 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
PPFIA3-207ENST00000602716 DCCP43146 1447 aa23.42■■□□□ 1.34
PPFIA3-207ENST00000602716 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
PPFIA3-207ENST00000602716 DMRT2Q9Y5R5 561 aa23.42■■□□□ 1.34
PPFIA3-207ENST00000602716 TTC21BQ7Z4L5 1316 aa23.41■■□□□ 1.34
PPFIA3-207ENST00000602716 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
PPFIA3-207ENST00000602716 ESCO1Q5FWF5 840 aa23.4■■□□□ 1.34
PPFIA3-207ENST00000602716 ZNF692Q9BU19 519 aaPredicted RBP23.4■■□□□ 1.34
PPFIA3-207ENST00000602716 MSH6P52701 1360 aa23.39■■□□□ 1.33
PPFIA3-207ENST00000602716 PNISRQ8TF01 805 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-207ENST00000602716 ATF3P18847 181 aa23.37■■□□□ 1.33
PPFIA3-207ENST00000602716 FBLN1P23142 703 aa23.36■■□□□ 1.33
PPFIA3-207ENST00000602716 PIK3C2AO00443 1686 aa23.35■■□□□ 1.33
PPFIA3-207ENST00000602716 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
PPFIA3-207ENST00000602716 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
PPFIA3-207ENST00000602716 LTBP4Q8N2S1 1624 aa23.34■■□□□ 1.33
PPFIA3-207ENST00000602716 XPCQ01831 940 aaPredicted RBP23.33■■□□□ 1.32
PPFIA3-207ENST00000602716 CADPS2Q86UW7 1296 aa23.32■■□□□ 1.32
PPFIA3-207ENST00000602716 FOXO3O43524 673 aa23.31■■□□□ 1.32
PPFIA3-207ENST00000602716 KIF1AQ12756 1690 aa23.31■■□□□ 1.32
PPFIA3-207ENST00000602716 MTHFSP49914 203 aa23.3■■□□□ 1.32
PPFIA3-207ENST00000602716 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
PPFIA3-207ENST00000602716 TTC21AQ8NDW8 1320 aa23.3■■□□□ 1.32
PPFIA3-207ENST00000602716 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
PPFIA3-207ENST00000602716 COG3Q96JB2 828 aa23.28■■□□□ 1.32
PPFIA3-207ENST00000602716 SENP3-EIF4A1A0A087X0R7 540 aa23.28■■□□□ 1.32
PPFIA3-207ENST00000602716 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
PPFIA3-207ENST00000602716 SHPRHQ149N8 1683 aa23.26■■□□□ 1.31
PPFIA3-207ENST00000602716 PAK3O75914 559 aaPredicted RBP23.26■■□□□ 1.31
PPFIA3-207ENST00000602716 COL3A1P02461 1466 aaPredicted RBP23.26■■□□□ 1.31
PPFIA3-207ENST00000602716 TRPM3Q9HCF6 1732 aaPredicted RBP23.26■■□□□ 1.31
PPFIA3-207ENST00000602716 PSME1Q06323 249 aa23.25■■□□□ 1.31
PPFIA3-207ENST00000602716 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
PPFIA3-207ENST00000602716 EMILIN1Q9Y6C2 1016 aa23.25■■□□□ 1.31
PPFIA3-207ENST00000602716 USP31Q70CQ4 1352 aa23.24■■□□□ 1.31
PPFIA3-207ENST00000602716 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.31
PPFIA3-207ENST00000602716 SOX12O15370 315 aa23.23■■□□□ 1.31
PPFIA3-207ENST00000602716 RRS1Q15050 365 aaKnown RBP23.23■■□□□ 1.31
PPFIA3-207ENST00000602716 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
PPFIA3-207ENST00000602716 POLKQ9UBT6 870 aa23.23■■□□□ 1.31
PPFIA3-207ENST00000602716 SMG6Q86US8 1419 aaKnown RBP23.22■■□□□ 1.31
PPFIA3-207ENST00000602716 USP54Q70EL1 1684 aa23.22■■□□□ 1.31
PPFIA3-207ENST00000602716 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
PPFIA3-207ENST00000602716 NLRP6P59044 892 aa23.21■■□□□ 1.31
PPFIA3-207ENST00000602716 ABTB2Q8N961 1025 aa23.21■■□□□ 1.31
PPFIA3-207ENST00000602716 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
PPFIA3-207ENST00000602716 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
PPFIA3-207ENST00000602716 SLAIN2Q9P270 581 aa23.2■■□□□ 1.3
PPFIA3-207ENST00000602716 BLMP54132 1417 aaPredicted RBP23.19■■□□□ 1.3
PPFIA3-207ENST00000602716 PXDNQ92626 1479 aa23.19■■□□□ 1.3
PPFIA3-207ENST00000602716 PPM1GO15355 546 aaPredicted RBP23.18■■□□□ 1.3
PPFIA3-207ENST00000602716 PEAK1Q9H792 1746 aa23.18■■□□□ 1.3
PPFIA3-207ENST00000602716 PNPLA6Q8IY17 1366 aa23.17■■□□□ 1.3
PPFIA3-207ENST00000602716 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.3
PPFIA3-207ENST00000602716 MAP2P11137 1827 aaKnown RBP23.17■■□□□ 1.3
PPFIA3-207ENST00000602716 CDK12Q9NYV4 1490 aaPredicted RBP23.16■■□□□ 1.3
PPFIA3-207ENST00000602716 ALS2Q96Q42 1657 aa23.16■■□□□ 1.3
PPFIA3-207ENST00000602716 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
PPFIA3-207ENST00000602716 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
PPFIA3-207ENST00000602716 NPHP3Q7Z494 1330 aa23.14■■□□□ 1.3
PPFIA3-207ENST00000602716 NFAT5O94916 1531 aa23.14■■□□□ 1.29
PPFIA3-207ENST00000602716 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
PPFIA3-207ENST00000602716 MAP3K19Q56UN5 1328 aa23.13■■□□□ 1.29
PPFIA3-207ENST00000602716 CCDC146Q8IYE0 955 aa23.12■■□□□ 1.29
PPFIA3-207ENST00000602716 INSRP06213 1382 aa23.11■■□□□ 1.29
PPFIA3-207ENST00000602716 FKBP8Q14318 412 aa23.11■■□□□ 1.29
PPFIA3-207ENST00000602716 TNS3Q68CZ2 1445 aa23.11■■□□□ 1.29
PPFIA3-207ENST00000602716 MED1Q15648 1581 aaPredicted RBP23.1■■□□□ 1.29
PPFIA3-207ENST00000602716 SLIT3O75094 1523 aa23.1■■□□□ 1.29
PPFIA3-207ENST00000602716 SBNO1A3KN83 1393 aa23.1■■□□□ 1.29
PPFIA3-207ENST00000602716 TSHZ2Q9NRE2 1034 aa23.09■■□□□ 1.29
PPFIA3-207ENST00000602716 USP19O94966 1318 aa23.09■■□□□ 1.29
PPFIA3-207ENST00000602716 NHSL1Q5SYE7 1610 aa23.09■■□□□ 1.29
PPFIA3-207ENST00000602716 ROBO1Q9Y6N7 1651 aa23.07■■□□□ 1.28
PPFIA3-207ENST00000602716 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
PPFIA3-207ENST00000602716 DIAPH1O60610 1272 aaKnown RBP23.07■■□□□ 1.28
PPFIA3-207ENST00000602716 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-207ENST00000602716 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
PPFIA3-207ENST00000602716 SOS2Q07890 1332 aaPredicted RBP23.06■■□□□ 1.28
PPFIA3-207ENST00000602716 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
PPFIA3-207ENST00000602716 SALL2Q9Y467 1007 aaPredicted RBP23.06■■□□□ 1.28
PPFIA3-207ENST00000602716 U2AF1L5P0DN76 240 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-207ENST00000602716 U2AF1Q01081 240 aaKnown RBP eCLIP23.05■■□□□ 1.28
PPFIA3-207ENST00000602716 IL13P35225 146 aa23.04■■□□□ 1.28
PPFIA3-207ENST00000602716 FLT4P35916 1363 aa23.03■■□□□ 1.28
PPFIA3-207ENST00000602716 NEFLP07196 543 aa23.03■■□□□ 1.28
PPFIA3-207ENST00000602716 PHRF1Q9P1Y6 1649 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-207ENST00000602716 EIF4A2Q14240 407 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-207ENST00000602716 LTN1O94822 1766 aa23.03■■□□□ 1.28
PPFIA3-207ENST00000602716 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
PPFIA3-207ENST00000602716 IQSEC2Q5JU85 1478 aa23.02■■□□□ 1.28
PPFIA3-207ENST00000602716 GCP02774 474 aa23.02■■□□□ 1.28
PPFIA3-207ENST00000602716 CABLES1Q8TDN4 633 aa23.02■■□□□ 1.28
PPFIA3-207ENST00000602716 HOXC9P31274 260 aa23■■□□□ 1.27
PPFIA3-207ENST00000602716 AMPHP49418 695 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms