RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 WASHC4Q2M389 1173 aa14.37□□□□□ -0.11
SGMS1-206ENST00000602565 ARMC2Q8NEN0 867 aa14.37□□□□□ -0.11
SGMS1-206ENST00000602565 FKBPLQ9UIM3 349 aa14.37□□□□□ -0.11
SGMS1-206ENST00000602565 ZNF777Q9ULD5 760 aaPredicted RBP14.37□□□□□ -0.11
SGMS1-206ENST00000602565 FCF1Q9Y324 198 aaKnown RBP14.36□□□□□ -0.11
SGMS1-206ENST00000602565 IRF5Q13568 498 aa14.34□□□□□ -0.11
SGMS1-206ENST00000602565 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
SGMS1-206ENST00000602565 GPR37L1O60883 481 aa14.32□□□□□ -0.12
SGMS1-206ENST00000602565 NBPF14Q5TI25 921 aa14.32□□□□□ -0.12
SGMS1-206ENST00000602565 UNC93B1Q9H1C4 597 aa14.32□□□□□ -0.12
SGMS1-206ENST00000602565 VAC14Q08AM6 782 aa14.3□□□□□ -0.12
SGMS1-206ENST00000602565 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
SGMS1-206ENST00000602565 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
SGMS1-206ENST00000602565 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.12
SGMS1-206ENST00000602565 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.12
SGMS1-206ENST00000602565 POM121CA8CG34 1229 aa14.26□□□□□ -0.13
SGMS1-206ENST00000602565 RNF223E7ERA6 249 aa14.26□□□□□ -0.13
SGMS1-206ENST00000602565 ZBTB24O43167 697 aaPredicted RBP14.26□□□□□ -0.13
SGMS1-206ENST00000602565 ARID3AQ99856 593 aa14.26□□□□□ -0.13
SGMS1-206ENST00000602565 ZBBXA8MT70 800 aa14.25□□□□□ -0.13
SGMS1-206ENST00000602565 PPP1R18Q6NYC8 613 aa14.25□□□□□ -0.13
SGMS1-206ENST00000602565 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
SGMS1-206ENST00000602565 PTK2Q05397 1052 aa14.24□□□□□ -0.13
SGMS1-206ENST00000602565 NR1H3Q13133 447 aa14.24□□□□□ -0.13
SGMS1-206ENST00000602565 PDXDC2PQ6P474 469 aa14.24□□□□□ -0.13
SGMS1-206ENST00000602565 CALR3Q96L12 384 aaKnown RBP14.24□□□□□ -0.13
SGMS1-206ENST00000602565 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.24□□□□□ -0.13
SGMS1-206ENST00000602565 GLMNQ92990 594 aa14.23□□□□□ -0.13
SGMS1-206ENST00000602565 CCDC97Q96F63 343 aaPredicted RBP14.23□□□□□ -0.13
SGMS1-206ENST00000602565 FBXO45P0C2W1 286 aa14.22□□□□□ -0.13
SGMS1-206ENST00000602565 EIF4G2P78344 907 aaKnown RBP eCLIP14.22□□□□□ -0.13
SGMS1-206ENST00000602565 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
SGMS1-206ENST00000602565 SOX11P35716 441 aa14.21□□□□□ -0.13
SGMS1-206ENST00000602565 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
SGMS1-206ENST00000602565 AGERQ15109 404 aa14.2□□□□□ -0.14
SGMS1-206ENST00000602565 LINC01559Q495D7 138 aa14.2□□□□□ -0.14
SGMS1-206ENST00000602565 BAP1Q92560 729 aa14.2□□□□□ -0.14
SGMS1-206ENST00000602565 SEMA3FQ13275 785 aa14.19□□□□□ -0.14
SGMS1-206ENST00000602565 ARHGAP9Q9BRR9 750 aa14.19□□□□□ -0.14
SGMS1-206ENST00000602565 HDGFL1Q5TGJ6 251 aa14.18□□□□□ -0.14
SGMS1-206ENST00000602565 SERPINA10Q9UK55 444 aa14.18□□□□□ -0.14
SGMS1-206ENST00000602565 ZBTB33Q86T24 672 aa14.17□□□□□ -0.14
SGMS1-206ENST00000602565 ZNF511Q8NB15 262 aa14.17□□□□□ -0.14
SGMS1-206ENST00000602565 MAGEB6P1A0A0J9YX57 407 aa14.15□□□□□ -0.14
SGMS1-206ENST00000602565 IFFO2Q5TF58 517 aa14.15□□□□□ -0.14
SGMS1-206ENST00000602565 BPHLQ86WA6 291 aaPredicted RBP14.15□□□□□ -0.14
SGMS1-206ENST00000602565 ZNF592Q92610 1267 aa14.15□□□□□ -0.14
SGMS1-206ENST00000602565 CARD14Q9BXL6 1004 aa14.15□□□□□ -0.14
SGMS1-206ENST00000602565 PLA2G2EQ9NZK7 142 aa14.15□□□□□ -0.14
SGMS1-206ENST00000602565 PLA2G2CQ5R387 149 aa14.15□□□□□ -0.15
SGMS1-206ENST00000602565 TRIM32Q13049 653 aa14.14□□□□□ -0.15
SGMS1-206ENST00000602565 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
SGMS1-206ENST00000602565 ADAM32Q8TC27 787 aa14.13□□□□□ -0.15
SGMS1-206ENST00000602565 ADAMTS19Q8TE59 1207 aa14.13□□□□□ -0.15
SGMS1-206ENST00000602565 ALG2Q9H553 416 aa14.13□□□□□ -0.15
SGMS1-206ENST00000602565 PCDHB9Q9Y5E1 797 aa14.13□□□□□ -0.15
SGMS1-206ENST00000602565 RPIAP49247 311 aa14.12□□□□□ -0.15
SGMS1-206ENST00000602565 SH3BP2P78314 561 aa14.11□□□□□ -0.15
SGMS1-206ENST00000602565 FOXJ1Q92949 421 aa14.11□□□□□ -0.15
SGMS1-206ENST00000602565 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
SGMS1-206ENST00000602565 OCSTAMPQ9BR26 566 aa14.1□□□□□ -0.15
SGMS1-206ENST00000602565 MCCD1P59942 119 aaPredicted RBP14.09□□□□□ -0.15
SGMS1-206ENST00000602565 SH3RF1Q7Z6J0 888 aa14.09□□□□□ -0.15
SGMS1-206ENST00000602565 DZIP3Q86Y13 1208 aaKnown RBP14.09□□□□□ -0.15
SGMS1-206ENST00000602565 WNT7BP56706 349 aa14.07□□□□□ -0.16
SGMS1-206ENST00000602565 SLC10A4Q96EP9 437 aa14.06□□□□□ -0.16
SGMS1-206ENST00000602565 A0A0G2JS52 829 aa14.04□□□□□ -0.16
SGMS1-206ENST00000602565 ERFEQ4G0M1 354 aa14.04□□□□□ -0.16
SGMS1-206ENST00000602565 C4orf48Q5BLP8 95 aa14.04□□□□□ -0.16
SGMS1-206ENST00000602565 SLC19A1P41440 591 aa14.03□□□□□ -0.16
SGMS1-206ENST00000602565 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
SGMS1-206ENST00000602565 SKOR1P84550 965 aa14.02□□□□□ -0.17
SGMS1-206ENST00000602565 EHBP1Q8NDI1 1231 aa14.02□□□□□ -0.17
SGMS1-206ENST00000602565 VARSP26640 1264 aaKnown RBP14.01□□□□□ -0.17
SGMS1-206ENST00000602565 SLFNL1Q499Z3 407 aa14.01□□□□□ -0.17
SGMS1-206ENST00000602565 FAM174AQ8TBP5 190 aa14.01□□□□□ -0.17
SGMS1-206ENST00000602565 UCN2Q96RP3 112 aa14□□□□□ -0.17
SGMS1-206ENST00000602565 PPP1R12CQ9BZL4 782 aa14□□□□□ -0.17
SGMS1-206ENST00000602565 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
SGMS1-206ENST00000602565 PALM3A6NDB9 673 aaPredicted RBP13.98□□□□□ -0.17
SGMS1-206ENST00000602565 NBPF20Q3BBV1 942 aa13.98□□□□□ -0.17
SGMS1-206ENST00000602565 RC3H1Q5TC82 1133 aaKnown RBP13.98□□□□□ -0.17
SGMS1-206ENST00000602565 C1QTNF2Q9BXJ5 285 aa13.98□□□□□ -0.17
SGMS1-206ENST00000602565 CDV3Q9UKY7 258 aaKnown RBP13.98□□□□□ -0.17
SGMS1-206ENST00000602565 RNF135Q8IUD6 432 aa13.97□□□□□ -0.17
SGMS1-206ENST00000602565 TFIP11Q9UBB9 837 aaKnown RBP13.97□□□□□ -0.17
SGMS1-206ENST00000602565 TRMT44Q8IYL2 757 aaKnown RBP13.96□□□□□ -0.17
SGMS1-206ENST00000602565 EMID1Q96A84 441 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-206ENST00000602565 SKIP12755 728 aa13.95□□□□□ -0.18
SGMS1-206ENST00000602565 RFX1P22670 979 aa13.95□□□□□ -0.18
SGMS1-206ENST00000602565 PIK3CDO00329 1044 aa13.94□□□□□ -0.18
SGMS1-206ENST00000602565 ATP9BO43861 1147 aa13.94□□□□□ -0.18
SGMS1-206ENST00000602565 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-206ENST00000602565 SPRYD7Q5W111 196 aa13.94□□□□□ -0.18
SGMS1-206ENST00000602565 TBC1D9Q6ZT07 1266 aa13.94□□□□□ -0.18
SGMS1-206ENST00000602565 ARID5BQ14865 1188 aa13.93□□□□□ -0.18
SGMS1-206ENST00000602565 NFATC2IPQ8NCF5 419 aa13.93□□□□□ -0.18
SGMS1-206ENST00000602565 PRKD2Q9BZL6 878 aa13.93□□□□□ -0.18
SGMS1-206ENST00000602565 ZNF697Q5TEC3 545 aa13.92□□□□□ -0.18
SGMS1-206ENST00000602565 RNF20Q5VTR2 975 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms