RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 LILRB3O75022 631 aa12.45□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 VARSP26640 1264 aaKnown RBP12.43□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 PER1O15534 1290 aaPredicted RBP12.42□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 MPNDQ8N594 471 aa12.41□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 RTL5Q5HYW3 569 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 TREML4Q6UXN2 200 aa12.4□□□□□ -0.42
COMMD3-BMI1-206ENST00000602395 SNRPBP14678 240 aaKnown RBP12.39□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 LCE2AQ5TA79 106 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 BCANQ96GW7 911 aa12.39□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 TRIM47Q96LD4 638 aa12.39□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 PLEKHG3A1L390 1219 aa12.37□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 TSC1Q92574 1164 aa12.37□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 FOXJ1Q92949 421 aa12.37□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 CAPN5O15484 640 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 FAM174AQ8TBP5 190 aa12.34□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
COMMD3-BMI1-206ENST00000602395 C4orf48Q5BLP8 95 aa12.32□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 TRIM46Q7Z4K8 759 aa12.32□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 CDK15Q96Q40 435 aa12.32□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 NNTQ13423 1086 aa12.31□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 SKIV2LQ15477 1246 aaKnown RBP12.3□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 ARMC2Q8NEN0 867 aa12.3□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 WFS1O76024 890 aa12.29□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 BMP1P13497 986 aa12.29□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 NFX1Q12986 1120 aaKnown RBP12.29□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 BPHLQ86WA6 291 aaPredicted RBP12.29□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 FAM117AQ9C073 453 aa12.29□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 ADH1CP00326 375 aa12.28□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 KLF16Q9BXK1 252 aaPredicted RBP12.28□□□□□ -0.44
COMMD3-BMI1-206ENST00000602395 CTDSPL2Q05D32 466 aa12.27□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 AGERQ15109 404 aa12.27□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 TIMP2P16035 220 aa12.25□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 GRM5P41594 1212 aa12.25□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 ARID5BQ14865 1188 aa12.25□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 TERTO14746 1132 aaKnown RBP12.24□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 WDR4P57081 412 aaKnown RBP12.24□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 C1QTNF2Q9BXJ5 285 aa12.24□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 NBPF14Q5TI25 921 aa12.23□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 SH3BP5LQ7L8J4 393 aa12.23□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 NR5A1Q13285 461 aa12.22□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 NR3C2P08235 984 aa12.21□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 ZFP42Q96MM3 310 aa12.21□□□□□ -0.45
COMMD3-BMI1-206ENST00000602395 LCE2CQ5TA81 110 aa12.2□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 LRRN4Q8WUT4 740 aa12.2□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 MRPL14Q6P1L8 145 aaKnown RBP12.19□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 ZIC2O95409 532 aaPredicted RBP12.17□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 ITPKCQ96DU7 683 aa12.17□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 ZFAND3Q9H8U3 227 aa12.17□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 MAP4K5Q9Y4K4 846 aa12.17□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 MAGEB6P1A0A0J9YX57 407 aa12.16□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 WIPF1O43516 503 aa12.15□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 SCARF1Q14162 830 aa12.15□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 PDXDC2PQ6P474 469 aa12.15□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 NXF1Q9UBU9 619 aaKnown RBP12.15□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
COMMD3-BMI1-206ENST00000602395 NR6A1Q15406 480 aa12.14□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 VASH1Q7L8A9 365 aaPredicted RBP12.13□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 CARD14Q9BXL6 1004 aa12.13□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 AP1G2O75843 785 aa12.12□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 FSHRP23945 695 aa12.11□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 NPAS3Q8IXF0 933 aa12.11□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 ARHGAP9Q9BRR9 750 aa12.1□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
COMMD3-BMI1-206ENST00000602395 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 CCDC116Q8IYX3 515 aa12.07□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 MEIOBQ8N635 442 aa12.07□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 EMILIN1Q9Y6C2 1016 aa12.07□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 H3BM21 787 aa12.06□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 RFC5P40937 340 aa12.06□□□□□ -0.48
COMMD3-BMI1-206ENST00000602395 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms