RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-227	ENST00000602056	POLR3A	O14802	1390 aa	Predicted RBP	33.72	■■■□□ 2.99
GTPBP3-227	ENST00000602056	KRT27	Q7Z3Y8	459 aa		33.71	■■■□□ 2.99
GTPBP3-227	ENST00000602056	CCDC61	Q9Y6R9	512 aa		33.71	■■■□□ 2.99
GTPBP3-227	ENST00000602056	NRAP	Q86VF7	1730 aa		33.7	■■■□□ 2.99
GTPBP3-227	ENST00000602056	BRWD3	Q6RI45	1802 aa		33.7	■■■□□ 2.99
GTPBP3-227	ENST00000602056	FAM98C	Q17RN3	349 aa	Known RBP	33.7	■■■□□ 2.99
GTPBP3-227	ENST00000602056	ZRANB1	Q9UGI0	708 aa		33.7	■■■□□ 2.99
GTPBP3-227	ENST00000602056	ACE	P12821	1306 aa		33.7	■■■□□ 2.99
GTPBP3-227	ENST00000602056	KIAA1210	Q9ULL0	1709 aa		33.7	■■■□□ 2.98
GTPBP3-227	ENST00000602056	PLEKHG3	A1L390	1219 aa		33.69	■■■□□ 2.98
GTPBP3-227	ENST00000602056	NBPF8	Q3BBV2	869 aa		33.69	■■■□□ 2.98
GTPBP3-227	ENST00000602056	CRYBG1	Q9Y4K1	1723 aa		33.68	■■■□□ 2.98
GTPBP3-227	ENST00000602056	DEFB132	Q7Z7B7	95 aa		33.68	■■■□□ 2.98
GTPBP3-227	ENST00000602056	PRDM11	Q9NQV5	511 aa		33.68	■■■□□ 2.98
GTPBP3-227	ENST00000602056	COL14A1	Q05707	1796 aa	Known RBP	33.67	■■■□□ 2.98
GTPBP3-227	ENST00000602056	SPATA31A5	Q5VU36	1347 aa		33.66	■■■□□ 2.98
GTPBP3-227	ENST00000602056	NUTM2G	Q5VZR2	741 aa		33.66	■■■□□ 2.98
GTPBP3-227	ENST00000602056	SPATA31A7	Q8IWB4	1347 aa		33.66	■■■□□ 2.98
GTPBP3-227	ENST00000602056	KIAA0232	Q92628	1395 aa		33.65	■■■□□ 2.98
GTPBP3-227	ENST00000602056	L3MBTL2	Q969R5	705 aa		33.65	■■■□□ 2.98
GTPBP3-227	ENST00000602056	ITSN1	Q15811	1721 aa		33.64	■■■□□ 2.98
GTPBP3-227	ENST00000602056	CHRNA2	Q15822	529 aa		33.63	■■■□□ 2.97
GTPBP3-227	ENST00000602056	TOPAZ1	Q8N9V7	1692 aa		33.62	■■■□□ 2.97
GTPBP3-227	ENST00000602056	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.62	■■■□□ 2.97
GTPBP3-227	ENST00000602056		A0A0G2JS52	829 aa		33.62	■■■□□ 2.97
GTPBP3-227	ENST00000602056	MYT1	Q01538	1121 aa		33.62	■■■□□ 2.97
GTPBP3-227	ENST00000602056	ZC3H6	P61129	1189 aa	Known RBP	33.6	■■■□□ 2.97
GTPBP3-227	ENST00000602056	SIN3A	Q96ST3	1273 aa		33.6	■■■□□ 2.97
GTPBP3-227	ENST00000602056	CABP2	Q9NPB3	220 aa		33.59	■■■□□ 2.97
GTPBP3-227	ENST00000602056	SRCAP	Q6ZRS2	3230 aa		33.58	■■■□□ 2.97
GTPBP3-227	ENST00000602056	SRPK2	P78362	688 aa	Known RBP	33.58	■■■□□ 2.97
GTPBP3-227	ENST00000602056	SF3B2	Q13435	895 aa	Known RBP	33.56	■■■□□ 2.96
GTPBP3-227	ENST00000602056	PPIP5K1	Q6PFW1	1433 aa		33.54	■■■□□ 2.96
GTPBP3-227	ENST00000602056	FAM182B	Q5T319	152 aa		33.54	■■■□□ 2.96
GTPBP3-227	ENST00000602056	ABTB2	Q8N961	1025 aa		33.54	■■■□□ 2.96
GTPBP3-227	ENST00000602056	SPATA31A1	Q5TZJ5	1347 aa		33.53	■■■□□ 2.96
GTPBP3-227	ENST00000602056	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.53	■■■□□ 2.96
GTPBP3-227	ENST00000602056	STRN4	Q9NRL3	753 aa		33.52	■■■□□ 2.96
GTPBP3-227	ENST00000602056	USP19	O94966	1318 aa		33.52	■■■□□ 2.96
GTPBP3-227	ENST00000602056	THSD7A	Q9UPZ6	1657 aa		33.48	■■■□□ 2.95
GTPBP3-227	ENST00000602056	CABP1	Q9NZU7	370 aa		33.48	■■■□□ 2.95
GTPBP3-227	ENST00000602056	NEUROD1	Q13562	356 aa		33.47	■■■□□ 2.95
GTPBP3-227	ENST00000602056	NRK	Q7Z2Y5	1582 aa		33.47	■■■□□ 2.95
GTPBP3-227	ENST00000602056	CPD	O75976	1380 aa		33.47	■■■□□ 2.95
GTPBP3-227	ENST00000602056	SSH2	Q76I76	1423 aa		33.45	■■■□□ 2.94
GTPBP3-227	ENST00000602056	GC	P02774	474 aa		33.44	■■■□□ 2.94
GTPBP3-227	ENST00000602056	NLRP13	Q86W25	1043 aa		33.44	■■■□□ 2.94
GTPBP3-227	ENST00000602056	CAMTA1	Q9Y6Y1	1673 aa		33.44	■■■□□ 2.94
GTPBP3-227	ENST00000602056	BAG6	P46379	1132 aa		33.43	■■■□□ 2.94
GTPBP3-227	ENST00000602056	QRICH2	Q9H0J4	1663 aa		33.42	■■■□□ 2.94
GTPBP3-227	ENST00000602056	LARP1	Q6PKG0	1096 aa	Known RBP	33.42	■■■□□ 2.94
GTPBP3-227	ENST00000602056	USP35	Q9P2H5	1018 aa		33.42	■■■□□ 2.94
GTPBP3-227	ENST00000602056	EVA1C	P58658	441 aa		33.41	■■■□□ 2.94
GTPBP3-227	ENST00000602056	USP6	P35125	1406 aa		33.41	■■■□□ 2.94
GTPBP3-227	ENST00000602056	BRD4	O60885	1362 aa	Predicted RBP	33.4	■■■□□ 2.94
GTPBP3-227	ENST00000602056	EN1	Q05925	392 aa	Predicted RBP	33.39	■■■□□ 2.94
GTPBP3-227	ENST00000602056	TRPM1	Q7Z4N2	1603 aa		33.39	■■■□□ 2.93
GTPBP3-227	ENST00000602056	ROCK2	O75116	1388 aa	Known RBP	33.38	■■■□□ 2.93
GTPBP3-227	ENST00000602056	EVC2	Q86UK5	1308 aa		33.38	■■■□□ 2.93
GTPBP3-227	ENST00000602056	BARGIN	Q6ZT62	677 aa		33.38	■■■□□ 2.93
GTPBP3-227	ENST00000602056	LMO7	Q8WWI1	1683 aa		33.37	■■■□□ 2.93
GTPBP3-227	ENST00000602056	NLRP6	P59044	892 aa		33.34	■■■□□ 2.93
GTPBP3-227	ENST00000602056	TCP11L2	Q8N4U5	519 aa		33.33	■■■□□ 2.93
GTPBP3-227	ENST00000602056	DISP2	A7MBM2	1401 aa		33.32	■■■□□ 2.92
GTPBP3-227	ENST00000602056	FAM196A	Q6ZSG2	479 aa		33.32	■■■□□ 2.92
GTPBP3-227	ENST00000602056	PSD	A5PKW4	1024 aa	Predicted RBP	33.31	■■■□□ 2.92
GTPBP3-227	ENST00000602056	COL5A2	P05997	1499 aa	Predicted RBP	33.31	■■■□□ 2.92
GTPBP3-227	ENST00000602056	TRIM37	O94972	964 aa		33.3	■■■□□ 2.92
GTPBP3-227	ENST00000602056	SLIT3	O75094	1523 aa		33.28	■■■□□ 2.92
GTPBP3-227	ENST00000602056	EZH2	Q15910	746 aa	Known RBP	33.27	■■■□□ 2.92
GTPBP3-227	ENST00000602056	RGPD1	P0DJD0	1748 aa		33.27	■■■□□ 2.92
GTPBP3-227	ENST00000602056	AATK	Q6ZMQ8	1374 aa		33.26	■■■□□ 2.92
GTPBP3-227	ENST00000602056	ZBTB7C	A1YPR0	619 aa		33.26	■■■□□ 2.91
GTPBP3-227	ENST00000602056	THRAP3	Q9Y2W1	955 aa	Known RBP	33.26	■■■□□ 2.91
GTPBP3-227	ENST00000602056	TTC21B	Q7Z4L5	1316 aa		33.26	■■■□□ 2.91
GTPBP3-227	ENST00000602056	PDE3B	Q13370	1112 aa		33.25	■■■□□ 2.91
GTPBP3-227	ENST00000602056	CAMKK2	Q96RR4	588 aa		33.25	■■■□□ 2.91
GTPBP3-227	ENST00000602056	TNS1	Q9HBL0	1735 aa	Known RBP	33.24	■■■□□ 2.91
GTPBP3-227	ENST00000602056	ZNF692	Q9BU19	519 aa	Predicted RBP	33.23	■■■□□ 2.91
GTPBP3-227	ENST00000602056	PIK3C2A	O00443	1686 aa		33.23	■■■□□ 2.91
GTPBP3-227	ENST00000602056	CRB1	P82279	1406 aa		33.21	■■■□□ 2.91
GTPBP3-227	ENST00000602056	CPSF1	Q10570	1443 aa	Known RBP	33.21	■■■□□ 2.91
GTPBP3-227	ENST00000602056	AXIN2	Q9Y2T1	843 aa		33.21	■■■□□ 2.91
GTPBP3-227	ENST00000602056	APBA3	O96018	575 aa		33.19	■■■□□ 2.9
GTPBP3-227	ENST00000602056	R3HDM1	Q15032	1099 aa	Known RBP	33.18	■■■□□ 2.9
GTPBP3-227	ENST00000602056	ARHGEF25	Q86VW2	580 aa		33.18	■■■□□ 2.9
GTPBP3-227	ENST00000602056	CARD11	Q9BXL7	1154 aa		33.16	■■■□□ 2.9
GTPBP3-227	ENST00000602056	SBNO2	Q9Y2G9	1366 aa		33.16	■■■□□ 2.9
GTPBP3-227	ENST00000602056	TTC21A	Q8NDW8	1320 aa		33.15	■■■□□ 2.9
GTPBP3-227	ENST00000602056	COL18A1	P39060	1754 aa		33.14	■■■□□ 2.9
GTPBP3-227	ENST00000602056	LRP5	O75197	1615 aa		33.13	■■■□□ 2.89
GTPBP3-227	ENST00000602056	KTN1	Q86UP2	1357 aa	Known RBP	33.13	■■■□□ 2.89
GTPBP3-227	ENST00000602056	SOX12	O15370	315 aa		33.13	■■■□□ 2.89
GTPBP3-227	ENST00000602056	TOM1L2	Q6ZVM7	507 aa		33.13	■■■□□ 2.89
GTPBP3-227	ENST00000602056	KCNH5	Q8NCM2	988 aa		33.12	■■■□□ 2.89
GTPBP3-227	ENST00000602056	WDR17	Q8IZU2	1322 aa		33.11	■■■□□ 2.89
GTPBP3-227	ENST00000602056	PARD3	Q8TEW0	1356 aa		33.1	■■■□□ 2.89
GTPBP3-227	ENST00000602056	AKAP12	Q02952	1782 aa		33.09	■■■□□ 2.89
GTPBP3-227	ENST00000602056	PARP4	Q9UKK3	1724 aa	Known RBP	33.09	■■■□□ 2.89
GTPBP3-227	ENST00000602056	CD163L1	Q9NR16	1453 aa		33.08	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms