RNA–Protein interactions for RNA: ENST00000601897.1

RAB11B-205, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB11B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-205ENST00000601897 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
RAB11B-205ENST00000601897 TRPM3Q9HCF6 1732 aaPredicted RBP18.46■□□□□ 0.55
RAB11B-205ENST00000601897 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
RAB11B-205ENST00000601897 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
RAB11B-205ENST00000601897 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
RAB11B-205ENST00000601897 SLIT2O94813 1529 aa18.44■□□□□ 0.54
RAB11B-205ENST00000601897 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
RAB11B-205ENST00000601897 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
RAB11B-205ENST00000601897 ABTB2Q8N961 1025 aa18.44■□□□□ 0.54
RAB11B-205ENST00000601897 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
RAB11B-205ENST00000601897 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
RAB11B-205ENST00000601897 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
RAB11B-205ENST00000601897 FAM83GA6ND36 823 aa18.43■□□□□ 0.54
RAB11B-205ENST00000601897 VPS72Q15906 364 aa18.43■□□□□ 0.54
RAB11B-205ENST00000601897 CARD11Q9BXL7 1154 aa18.43■□□□□ 0.54
RAB11B-205ENST00000601897 ALS2Q96Q42 1657 aa18.43■□□□□ 0.54
RAB11B-205ENST00000601897 PLCH1Q4KWH8 1693 aa18.42■□□□□ 0.54
RAB11B-205ENST00000601897 RALGAPBQ86X10 1494 aa18.41■□□□□ 0.54
RAB11B-205ENST00000601897 NWD2Q9ULI1 1742 aa18.41■□□□□ 0.54
RAB11B-205ENST00000601897 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
RAB11B-205ENST00000601897 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
RAB11B-205ENST00000601897 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
RAB11B-205ENST00000601897 TOPAZ1Q8N9V7 1692 aa18.4■□□□□ 0.54
RAB11B-205ENST00000601897 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
RAB11B-205ENST00000601897 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
RAB11B-205ENST00000601897 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
RAB11B-205ENST00000601897 EVA1CP58658 441 aa18.38■□□□□ 0.53
RAB11B-205ENST00000601897 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
RAB11B-205ENST00000601897 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
RAB11B-205ENST00000601897 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
RAB11B-205ENST00000601897 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
RAB11B-205ENST00000601897 FAM98CQ17RN3 349 aaKnown RBP18.36■□□□□ 0.53
RAB11B-205ENST00000601897 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
RAB11B-205ENST00000601897 GLI3P10071 1580 aa18.35■□□□□ 0.53
RAB11B-205ENST00000601897 NLRP6P59044 892 aa18.35■□□□□ 0.53
RAB11B-205ENST00000601897 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
RAB11B-205ENST00000601897 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
RAB11B-205ENST00000601897 KRT27Q7Z3Y8 459 aa18.33■□□□□ 0.52
RAB11B-205ENST00000601897 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
RAB11B-205ENST00000601897 PHRF1Q9P1Y6 1649 aaKnown RBP18.32■□□□□ 0.52
RAB11B-205ENST00000601897 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
RAB11B-205ENST00000601897 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
RAB11B-205ENST00000601897 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
RAB11B-205ENST00000601897 USP6P35125 1406 aa18.31■□□□□ 0.52
RAB11B-205ENST00000601897 CRYBG1Q9Y4K1 1723 aa18.3■□□□□ 0.52
RAB11B-205ENST00000601897 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
RAB11B-205ENST00000601897 GCP02774 474 aa18.29■□□□□ 0.52
RAB11B-205ENST00000601897 SPATA31A5Q5VU36 1347 aa18.28■□□□□ 0.52
RAB11B-205ENST00000601897 SPATA31A7Q8IWB4 1347 aa18.28■□□□□ 0.52
RAB11B-205ENST00000601897 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
RAB11B-205ENST00000601897 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
RAB11B-205ENST00000601897 BRWD3Q6RI45 1802 aa18.28■□□□□ 0.52
RAB11B-205ENST00000601897 SOX12O15370 315 aa18.27■□□□□ 0.52
RAB11B-205ENST00000601897 ONECUT3O60422 494 aaPredicted RBP18.27■□□□□ 0.52
RAB11B-205ENST00000601897 USP19O94966 1318 aa18.26■□□□□ 0.51
RAB11B-205ENST00000601897 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
RAB11B-205ENST00000601897 NRKQ7Z2Y5 1582 aa18.25■□□□□ 0.51
RAB11B-205ENST00000601897 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
RAB11B-205ENST00000601897 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
RAB11B-205ENST00000601897 TTC21BQ7Z4L5 1316 aa18.24■□□□□ 0.51
RAB11B-205ENST00000601897 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
RAB11B-205ENST00000601897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
RAB11B-205ENST00000601897 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
RAB11B-205ENST00000601897 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
RAB11B-205ENST00000601897 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
RAB11B-205ENST00000601897 CPDO75976 1380 aa18.23■□□□□ 0.51
RAB11B-205ENST00000601897 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
RAB11B-205ENST00000601897 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
RAB11B-205ENST00000601897 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
RAB11B-205ENST00000601897 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
RAB11B-205ENST00000601897 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
RAB11B-205ENST00000601897 BAG6P46379 1132 aa18.21■□□□□ 0.51
RAB11B-205ENST00000601897 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
RAB11B-205ENST00000601897 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
RAB11B-205ENST00000601897 AKAP12Q02952 1782 aa18.21■□□□□ 0.51
RAB11B-205ENST00000601897 TOM1L2Q6ZVM7 507 aa18.2■□□□□ 0.5
RAB11B-205ENST00000601897 FAM182BQ5T319 152 aa18.19■□□□□ 0.5
RAB11B-205ENST00000601897 DEFB132Q7Z7B7 95 aa18.18■□□□□ 0.5
RAB11B-205ENST00000601897 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
RAB11B-205ENST00000601897 THRAP3Q9Y2W1 955 aaKnown RBP18.18■□□□□ 0.5
RAB11B-205ENST00000601897 PIK3C2AO00443 1686 aa18.18■□□□□ 0.5
RAB11B-205ENST00000601897 CAMTA1Q9Y6Y1 1673 aa18.18■□□□□ 0.5
RAB11B-205ENST00000601897 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
RAB11B-205ENST00000601897 TMF1P82094 1093 aa18.17■□□□□ 0.5
RAB11B-205ENST00000601897 BARGINQ6ZT62 677 aa18.17■□□□□ 0.5
RAB11B-205ENST00000601897 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
RAB11B-205ENST00000601897 FAM196AQ6ZSG2 479 aa18.16■□□□□ 0.5
RAB11B-205ENST00000601897 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
RAB11B-205ENST00000601897 SLIT3O75094 1523 aa18.16■□□□□ 0.5
RAB11B-205ENST00000601897 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
RAB11B-205ENST00000601897 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
RAB11B-205ENST00000601897 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
RAB11B-205ENST00000601897 CRB1P82279 1406 aa18.15■□□□□ 0.5
RAB11B-205ENST00000601897 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.5
RAB11B-205ENST00000601897 NME9Q86XW9 330 aa18.14■□□□□ 0.49
RAB11B-205ENST00000601897 LMO7Q8WWI1 1683 aa18.14■□□□□ 0.49
RAB11B-205ENST00000601897 MON2Q7Z3U7 1717 aa18.14■□□□□ 0.49
RAB11B-205ENST00000601897 USP47Q96K76 1375 aa18.14■□□□□ 0.49
RAB11B-205ENST00000601897 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
RAB11B-205ENST00000601897 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms