RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
DDX49-211ENST00000601772 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
DDX49-211ENST00000601772 NRXN1Q9ULB1 1477 aa12.36□□□□□ -0.43
DDX49-211ENST00000601772 FAM83GA6ND36 823 aa12.36□□□□□ -0.43
DDX49-211ENST00000601772 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
DDX49-211ENST00000601772 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
DDX49-211ENST00000601772 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
DDX49-211ENST00000601772 ZBTB7AO95365 584 aa12.35□□□□□ -0.43
DDX49-211ENST00000601772 FHDC1Q9C0D6 1143 aaPredicted RBP12.35□□□□□ -0.43
DDX49-211ENST00000601772 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
DDX49-211ENST00000601772 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
DDX49-211ENST00000601772 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
DDX49-211ENST00000601772 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
DDX49-211ENST00000601772 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
DDX49-211ENST00000601772 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
DDX49-211ENST00000601772 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
DDX49-211ENST00000601772 SPATA31A5Q5VU36 1347 aa12.32□□□□□ -0.44
DDX49-211ENST00000601772 SPATA31A7Q8IWB4 1347 aa12.32□□□□□ -0.44
DDX49-211ENST00000601772 TMEM132EQ6IEE7 984 aa12.31□□□□□ -0.44
DDX49-211ENST00000601772 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
DDX49-211ENST00000601772 TECPR2O15040 1411 aa12.3□□□□□ -0.44
DDX49-211ENST00000601772 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
DDX49-211ENST00000601772 KIF1AQ12756 1690 aa12.3□□□□□ -0.44
DDX49-211ENST00000601772 GPR162Q16538 588 aa12.3□□□□□ -0.44
DDX49-211ENST00000601772 PDGFDQ9GZP0 370 aaPredicted RBP12.3□□□□□ -0.44
DDX49-211ENST00000601772 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
DDX49-211ENST00000601772 KIAA1210Q9ULL0 1709 aa12.3□□□□□ -0.44
DDX49-211ENST00000601772 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
DDX49-211ENST00000601772 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
DDX49-211ENST00000601772 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
DDX49-211ENST00000601772 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
DDX49-211ENST00000601772 PTGER2P43116 358 aa12.29□□□□□ -0.44
DDX49-211ENST00000601772 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
DDX49-211ENST00000601772 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
DDX49-211ENST00000601772 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
DDX49-211ENST00000601772 STK26Q9P289 416 aa12.29□□□□□ -0.44
DDX49-211ENST00000601772 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
DDX49-211ENST00000601772 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
DDX49-211ENST00000601772 ABCC11Q96J66 1382 aa12.28□□□□□ -0.44
DDX49-211ENST00000601772 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
DDX49-211ENST00000601772 SHANK3Q9BYB0 1731 aa12.28□□□□□ -0.44
DDX49-211ENST00000601772 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
DDX49-211ENST00000601772 HSPA6P17066 643 aa12.27□□□□□ -0.45
DDX49-211ENST00000601772 PSME1Q06323 249 aa12.27□□□□□ -0.45
DDX49-211ENST00000601772 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
DDX49-211ENST00000601772 PDE3BQ13370 1112 aa12.26□□□□□ -0.45
DDX49-211ENST00000601772 WAPLQ7Z5K2 1190 aa12.26□□□□□ -0.45
DDX49-211ENST00000601772 NEUROD1Q13562 356 aa12.25□□□□□ -0.45
DDX49-211ENST00000601772 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
DDX49-211ENST00000601772 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
DDX49-211ENST00000601772 PLEKHH1Q9ULM0 1364 aa12.25□□□□□ -0.45
DDX49-211ENST00000601772 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
DDX49-211ENST00000601772 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
DDX49-211ENST00000601772 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
DDX49-211ENST00000601772 SLC34A2O95436 690 aa12.23□□□□□ -0.45
DDX49-211ENST00000601772 TRPM1Q7Z4N2 1603 aa12.22□□□□□ -0.45
DDX49-211ENST00000601772 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
DDX49-211ENST00000601772 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
DDX49-211ENST00000601772 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
DDX49-211ENST00000601772 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
DDX49-211ENST00000601772 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
DDX49-211ENST00000601772 COL13A1Q5TAT6 717 aaPredicted RBP12.2□□□□□ -0.46
DDX49-211ENST00000601772 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
DDX49-211ENST00000601772 ARXQ96QS3 562 aa12.2□□□□□ -0.46
DDX49-211ENST00000601772 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
DDX49-211ENST00000601772 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
DDX49-211ENST00000601772 SAFB2Q14151 953 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX49-211ENST00000601772 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
DDX49-211ENST00000601772 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
DDX49-211ENST00000601772 ATP10DQ9P241 1426 aa12.19□□□□□ -0.46
DDX49-211ENST00000601772 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 PRELPP51888 382 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 TNS4Q8IZW8 715 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 ZNF526Q8TF50 670 aaPredicted RBP12.18□□□□□ -0.46
DDX49-211ENST00000601772 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
DDX49-211ENST00000601772 STK32BQ9NY57 414 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
DDX49-211ENST00000601772 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
DDX49-211ENST00000601772 QRICH2Q9H0J4 1663 aa12.17□□□□□ -0.46
DDX49-211ENST00000601772 POGKQ9P215 609 aa12.17□□□□□ -0.46
DDX49-211ENST00000601772 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
DDX49-211ENST00000601772 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
DDX49-211ENST00000601772 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
DDX49-211ENST00000601772 NBPF1Q3BBV0 1214 aa12.14□□□□□ -0.47
DDX49-211ENST00000601772 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
DDX49-211ENST00000601772 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
DDX49-211ENST00000601772 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
DDX49-211ENST00000601772 PLSCR1O15162 318 aa12.13□□□□□ -0.47
DDX49-211ENST00000601772 EVA1CP58658 441 aa12.13□□□□□ -0.47
DDX49-211ENST00000601772 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
DDX49-211ENST00000601772 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
DDX49-211ENST00000601772 KIAA0232Q92628 1395 aa12.13□□□□□ -0.47
DDX49-211ENST00000601772 TOPAZ1Q8N9V7 1692 aa12.13□□□□□ -0.47
DDX49-211ENST00000601772 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
DDX49-211ENST00000601772 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
DDX49-211ENST00000601772 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
DDX49-211ENST00000601772 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
DDX49-211ENST00000601772 SLC15A2Q16348 729 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms