RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CCDC61Q9Y6R9 512 aa24.59■■□□□ 1.53
SCAF1-204ENST00000601038 BRWD3Q6RI45 1802 aa24.56■■□□□ 1.52
SCAF1-204ENST00000601038 POLR3AO14802 1390 aaPredicted RBP24.55■■□□□ 1.52
SCAF1-204ENST00000601038 PLEKHG3A1L390 1219 aa24.55■■□□□ 1.52
SCAF1-204ENST00000601038 COL14A1Q05707 1796 aaKnown RBP24.54■■□□□ 1.52
SCAF1-204ENST00000601038 BLMP54132 1417 aaPredicted RBP24.54■■□□□ 1.52
SCAF1-204ENST00000601038 NBPF8Q3BBV2 869 aa24.54■■□□□ 1.52
SCAF1-204ENST00000601038 ACEP12821 1306 aa24.54■■□□□ 1.52
SCAF1-204ENST00000601038 KRT27Q7Z3Y8 459 aa24.53■■□□□ 1.52
SCAF1-204ENST00000601038 PRDM11Q9NQV5 511 aa24.53■■□□□ 1.52
SCAF1-204ENST00000601038 ZRANB1Q9UGI0 708 aa24.53■■□□□ 1.52
SCAF1-204ENST00000601038 NRAPQ86VF7 1730 aa24.52■■□□□ 1.52
SCAF1-204ENST00000601038 L3MBTL2Q969R5 705 aa24.52■■□□□ 1.52
SCAF1-204ENST00000601038 CRYBG1Q9Y4K1 1723 aa24.52■■□□□ 1.52
SCAF1-204ENST00000601038 EP400Q96L91 3159 aa24.52■■□□□ 1.52
SCAF1-204ENST00000601038 CENPJQ9HC77 1338 aaPredicted RBP24.51■■□□□ 1.51
SCAF1-204ENST00000601038 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
SCAF1-204ENST00000601038 FAM98CQ17RN3 349 aaKnown RBP24.5■■□□□ 1.51
SCAF1-204ENST00000601038 A0A0G2JS52 829 aa24.49■■□□□ 1.51
SCAF1-204ENST00000601038 MYT1Q01538 1121 aa24.49■■□□□ 1.51
SCAF1-204ENST00000601038 SPATA31A5Q5VU36 1347 aa24.49■■□□□ 1.51
SCAF1-204ENST00000601038 SPATA31A7Q8IWB4 1347 aa24.49■■□□□ 1.51
SCAF1-204ENST00000601038 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
SCAF1-204ENST00000601038 SF3B2Q13435 895 aaKnown RBP24.48■■□□□ 1.51
SCAF1-204ENST00000601038 KIAA0232Q92628 1395 aa24.47■■□□□ 1.51
SCAF1-204ENST00000601038 NUTM2GQ5VZR2 741 aa24.47■■□□□ 1.51
SCAF1-204ENST00000601038 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
SCAF1-204ENST00000601038 ABTB2Q8N961 1025 aa24.45■■□□□ 1.5
SCAF1-204ENST00000601038 CABP2Q9NPB3 220 aa24.45■■□□□ 1.5
SCAF1-204ENST00000601038 ZC3H6P61129 1189 aaKnown RBP24.44■■□□□ 1.5
SCAF1-204ENST00000601038 CHRNA2Q15822 529 aa24.44■■□□□ 1.5
SCAF1-204ENST00000601038 DEFB132Q7Z7B7 95 aa24.44■■□□□ 1.5
SCAF1-204ENST00000601038 PPIP5K1Q6PFW1 1433 aa24.44■■□□□ 1.5
SCAF1-204ENST00000601038 PHRF1Q9P1Y6 1649 aaKnown RBP24.42■■□□□ 1.5
SCAF1-204ENST00000601038 NEUROD1Q13562 356 aa24.41■■□□□ 1.5
SCAF1-204ENST00000601038 SPATA31A1Q5TZJ5 1347 aa24.4■■□□□ 1.5
SCAF1-204ENST00000601038 NLRP13Q86W25 1043 aa24.4■■□□□ 1.5
SCAF1-204ENST00000601038 BRD4O60885 1362 aaPredicted RBP24.4■■□□□ 1.5
SCAF1-204ENST00000601038 QRICH2Q9H0J4 1663 aa24.4■■□□□ 1.5
SCAF1-204ENST00000601038 USP19O94966 1318 aa24.39■■□□□ 1.5
SCAF1-204ENST00000601038 STRN4Q9NRL3 753 aa24.39■■□□□ 1.49
SCAF1-204ENST00000601038 CABP1Q9NZU7 370 aa24.38■■□□□ 1.49
SCAF1-204ENST00000601038 CPDO75976 1380 aa24.37■■□□□ 1.49
SCAF1-204ENST00000601038 EVC2Q86UK5 1308 aa24.36■■□□□ 1.49
SCAF1-204ENST00000601038 TRPM1Q7Z4N2 1603 aa24.36■■□□□ 1.49
SCAF1-204ENST00000601038 EVA1CP58658 441 aa24.36■■□□□ 1.49
SCAF1-204ENST00000601038 THSD7AQ9UPZ6 1657 aa24.36■■□□□ 1.49
SCAF1-204ENST00000601038 ROCK2O75116 1388 aaKnown RBP24.35■■□□□ 1.49
SCAF1-204ENST00000601038 GCP02774 474 aa24.35■■□□□ 1.49
SCAF1-204ENST00000601038 BAG6P46379 1132 aa24.35■■□□□ 1.49
SCAF1-204ENST00000601038 NRKQ7Z2Y5 1582 aa24.34■■□□□ 1.49
SCAF1-204ENST00000601038 FAM182BQ5T319 152 aa24.34■■□□□ 1.49
SCAF1-204ENST00000601038 USP6P35125 1406 aa24.33■■□□□ 1.49
SCAF1-204ENST00000601038 SSH2Q76I76 1423 aa24.33■■□□□ 1.49
SCAF1-204ENST00000601038 CAMTA1Q9Y6Y1 1673 aa24.32■■□□□ 1.48
SCAF1-204ENST00000601038 BARGINQ6ZT62 677 aa24.32■■□□□ 1.48
SCAF1-204ENST00000601038 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
SCAF1-204ENST00000601038 NLRP6P59044 892 aa24.3■■□□□ 1.48
SCAF1-204ENST00000601038 LARP1Q6PKG0 1096 aaKnown RBP24.3■■□□□ 1.48
SCAF1-204ENST00000601038 LMO7Q8WWI1 1683 aa24.28■■□□□ 1.48
SCAF1-204ENST00000601038 FAM196AQ6ZSG2 479 aa24.28■■□□□ 1.48
SCAF1-204ENST00000601038 TCP11L2Q8N4U5 519 aa24.28■■□□□ 1.48
SCAF1-204ENST00000601038 ZNF692Q9BU19 519 aaPredicted RBP24.28■■□□□ 1.48
SCAF1-204ENST00000601038 EN1Q05925 392 aaPredicted RBP24.26■■□□□ 1.47
SCAF1-204ENST00000601038 THRAP3Q9Y2W1 955 aaKnown RBP24.26■■□□□ 1.47
SCAF1-204ENST00000601038 RGPD1P0DJD0 1748 aa24.26■■□□□ 1.47
SCAF1-204ENST00000601038 PDE3BQ13370 1112 aa24.24■■□□□ 1.47
SCAF1-204ENST00000601038 DISP2A7MBM2 1401 aa24.24■■□□□ 1.47
SCAF1-204ENST00000601038 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
SCAF1-204ENST00000601038 COL5A2P05997 1499 aaPredicted RBP24.23■■□□□ 1.47
SCAF1-204ENST00000601038 SLIT3O75094 1523 aa24.23■■□□□ 1.47
SCAF1-204ENST00000601038 TTC21BQ7Z4L5 1316 aa24.22■■□□□ 1.47
SCAF1-204ENST00000601038 TRIM37O94972 964 aa24.22■■□□□ 1.47
SCAF1-204ENST00000601038 SRCAPQ6ZRS2 3230 aa24.22■■□□□ 1.47
SCAF1-204ENST00000601038 SBNO2Q9Y2G9 1366 aa24.2■■□□□ 1.46
SCAF1-204ENST00000601038 ZBTB7CA1YPR0 619 aa24.2■■□□□ 1.46
SCAF1-204ENST00000601038 CARD11Q9BXL7 1154 aa24.2■■□□□ 1.46
SCAF1-204ENST00000601038 CRB1P82279 1406 aa24.19■■□□□ 1.46
SCAF1-204ENST00000601038 TTC21AQ8NDW8 1320 aa24.19■■□□□ 1.46
SCAF1-204ENST00000601038 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
SCAF1-204ENST00000601038 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
SCAF1-204ENST00000601038 KCNH5Q8NCM2 988 aa24.18■■□□□ 1.46
SCAF1-204ENST00000601038 TNS1Q9HBL0 1735 aaKnown RBP24.18■■□□□ 1.46
SCAF1-204ENST00000601038 PSDA5PKW4 1024 aaPredicted RBP24.17■■□□□ 1.46
SCAF1-204ENST00000601038 CAMKK2Q96RR4 588 aa24.17■■□□□ 1.46
SCAF1-204ENST00000601038 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
SCAF1-204ENST00000601038 EZH2Q15910 746 aaKnown RBP24.16■■□□□ 1.46
SCAF1-204ENST00000601038 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
SCAF1-204ENST00000601038 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
SCAF1-204ENST00000601038 TONSLQ96HA7 1378 aa24.16■■□□□ 1.46
SCAF1-204ENST00000601038 APBA3O96018 575 aa24.15■■□□□ 1.46
SCAF1-204ENST00000601038 AXIN2Q9Y2T1 843 aa24.15■■□□□ 1.46
SCAF1-204ENST00000601038 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
SCAF1-204ENST00000601038 COL18A1P39060 1754 aa24.14■■□□□ 1.45
SCAF1-204ENST00000601038 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
SCAF1-204ENST00000601038 PARD3Q8TEW0 1356 aa24.13■■□□□ 1.45
SCAF1-204ENST00000601038 PARP4Q9UKK3 1724 aaKnown RBP24.12■■□□□ 1.45
SCAF1-204ENST00000601038 WDR17Q8IZU2 1322 aa24.11■■□□□ 1.45
SCAF1-204ENST00000601038 SOX12O15370 315 aa24.1■■□□□ 1.45
SCAF1-204ENST00000601038 R3HDM1Q15032 1099 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms