RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.97■□□□□ 0.15
ZNF548-211ENST00000600927 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
ZNF548-211ENST00000600927 SLIT2O94813 1529 aa15.96■□□□□ 0.15
ZNF548-211ENST00000600927 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
ZNF548-211ENST00000600927 SRPK2P78362 688 aaKnown RBP15.96■□□□□ 0.15
ZNF548-211ENST00000600927 C8orf37Q96NL8 207 aa15.96■□□□□ 0.15
ZNF548-211ENST00000600927 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
ZNF548-211ENST00000600927 SSH2Q76I76 1423 aa15.95■□□□□ 0.14
ZNF548-211ENST00000600927 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
ZNF548-211ENST00000600927 BCL9LQ86UU0 1499 aa15.95■□□□□ 0.14
ZNF548-211ENST00000600927 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
ZNF548-211ENST00000600927 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
ZNF548-211ENST00000600927 MIER1Q8N108 512 aa15.94■□□□□ 0.14
ZNF548-211ENST00000600927 ATAD2Q6PL18 1390 aa15.94■□□□□ 0.14
ZNF548-211ENST00000600927 NRKQ7Z2Y5 1582 aa15.94■□□□□ 0.14
ZNF548-211ENST00000600927 ATRNO75882 1429 aa15.94■□□□□ 0.14
ZNF548-211ENST00000600927 USP6P35125 1406 aa15.94■□□□□ 0.14
ZNF548-211ENST00000600927 AKAP12Q02952 1782 aa15.93■□□□□ 0.14
ZNF548-211ENST00000600927 TESK2Q96S53 571 aa15.93■□□□□ 0.14
ZNF548-211ENST00000600927 PLCH1Q4KWH8 1693 aa15.92■□□□□ 0.14
ZNF548-211ENST00000600927 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
ZNF548-211ENST00000600927 ST20-MTHFSA0A0A6YYL1 179 aa15.92■□□□□ 0.14
ZNF548-211ENST00000600927 NGLY1Q96IV0 654 aa15.92■□□□□ 0.14
ZNF548-211ENST00000600927 CPSF1Q10570 1443 aaKnown RBP15.92■□□□□ 0.14
ZNF548-211ENST00000600927 CD163L1Q9NR16 1453 aa15.91■□□□□ 0.14
ZNF548-211ENST00000600927 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
ZNF548-211ENST00000600927 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
ZNF548-211ENST00000600927 KIF7Q2M1P5 1343 aa15.91■□□□□ 0.14
ZNF548-211ENST00000600927 C11orf95C9JLR9 678 aaPredicted RBP15.9■□□□□ 0.14
ZNF548-211ENST00000600927 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
ZNF548-211ENST00000600927 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
ZNF548-211ENST00000600927 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
ZNF548-211ENST00000600927 USP19O94966 1318 aa15.9■□□□□ 0.14
ZNF548-211ENST00000600927 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
ZNF548-211ENST00000600927 USP21Q9UK80 565 aa15.89■□□□□ 0.13
ZNF548-211ENST00000600927 COL14A1Q05707 1796 aaKnown RBP15.88■□□□□ 0.13
ZNF548-211ENST00000600927 RGS12O14924 1447 aa15.88■□□□□ 0.13
ZNF548-211ENST00000600927 ANP32CO43423 234 aa15.88■□□□□ 0.13
ZNF548-211ENST00000600927 LMOD2Q6P5Q4 547 aa15.88■□□□□ 0.13
ZNF548-211ENST00000600927 SLIT3O75094 1523 aa15.88■□□□□ 0.13
ZNF548-211ENST00000600927 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
ZNF548-211ENST00000600927 RXRBP28702 533 aa15.87■□□□□ 0.13
ZNF548-211ENST00000600927 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
ZNF548-211ENST00000600927 QTRT2Q9H974 415 aaKnown RBP15.87■□□□□ 0.13
ZNF548-211ENST00000600927 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
ZNF548-211ENST00000600927 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
ZNF548-211ENST00000600927 RBM6P78332 1123 aaKnown RBP15.86■□□□□ 0.13
ZNF548-211ENST00000600927 TRPC5Q9UL62 973 aaPredicted RBP15.86■□□□□ 0.13
ZNF548-211ENST00000600927 GLI3P10071 1580 aa15.86■□□□□ 0.13
ZNF548-211ENST00000600927 TMF1P82094 1093 aa15.85■□□□□ 0.13
ZNF548-211ENST00000600927 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
ZNF548-211ENST00000600927 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
ZNF548-211ENST00000600927 LMO7Q8WWI1 1683 aa15.84■□□□□ 0.13
ZNF548-211ENST00000600927 FAM83GA6ND36 823 aa15.84■□□□□ 0.13
ZNF548-211ENST00000600927 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
ZNF548-211ENST00000600927 CPDO75976 1380 aa15.84■□□□□ 0.13
ZNF548-211ENST00000600927 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
ZNF548-211ENST00000600927 ABTB2Q8N961 1025 aa15.82■□□□□ 0.12
ZNF548-211ENST00000600927 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
ZNF548-211ENST00000600927 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
ZNF548-211ENST00000600927 KIAA0232Q92628 1395 aa15.82■□□□□ 0.12
ZNF548-211ENST00000600927 A0A1W2PP64 1363 aa15.81■□□□□ 0.12
ZNF548-211ENST00000600927 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
ZNF548-211ENST00000600927 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
ZNF548-211ENST00000600927 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
ZNF548-211ENST00000600927 VPS72Q15906 364 aa15.8■□□□□ 0.12
ZNF548-211ENST00000600927 NUTM2GQ5VZR2 741 aa15.8■□□□□ 0.12
ZNF548-211ENST00000600927 GJD4Q96KN9 370 aaPredicted RBP15.8■□□□□ 0.12
ZNF548-211ENST00000600927 MYOM1P52179 1685 aa15.79■□□□□ 0.12
ZNF548-211ENST00000600927 NFAT5O94916 1531 aa15.79■□□□□ 0.12
ZNF548-211ENST00000600927 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
ZNF548-211ENST00000600927 NLRP13Q86W25 1043 aa15.79■□□□□ 0.12
ZNF548-211ENST00000600927 SLC12A5Q9H2X9 1139 aa15.79■□□□□ 0.12
ZNF548-211ENST00000600927 GCP02774 474 aa15.78■□□□□ 0.12
ZNF548-211ENST00000600927 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
ZNF548-211ENST00000600927 BTG4Q9NY30 223 aa15.77■□□□□ 0.12
ZNF548-211ENST00000600927 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 ANKRD36BQ8N2N9 1353 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 NLRP6P59044 892 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 ABCC6O95255 1503 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 COL18A1P39060 1754 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 OVOS2A0A0J9YW53 1432 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 OVOS2Q6IE36 1432 aa15.76■□□□□ 0.11
ZNF548-211ENST00000600927 ONECUT3O60422 494 aaPredicted RBP15.75■□□□□ 0.11
ZNF548-211ENST00000600927 HDGFL2Q7Z4V5 671 aaPredicted RBP15.75■□□□□ 0.11
ZNF548-211ENST00000600927 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
ZNF548-211ENST00000600927 EP400Q96L91 3159 aa15.75■□□□□ 0.11
ZNF548-211ENST00000600927 THSD7AQ9UPZ6 1657 aa15.74■□□□□ 0.11
ZNF548-211ENST00000600927 ZC3H6P61129 1189 aaKnown RBP15.74■□□□□ 0.11
ZNF548-211ENST00000600927 CHRNA2Q15822 529 aa15.74■□□□□ 0.11
ZNF548-211ENST00000600927 TERF2IPQ9NYB0 399 aa15.74■□□□□ 0.11
ZNF548-211ENST00000600927 AATKQ6ZMQ8 1374 aa15.74■□□□□ 0.11
ZNF548-211ENST00000600927 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
ZNF548-211ENST00000600927 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
ZNF548-211ENST00000600927 COL5A2P05997 1499 aaPredicted RBP15.73■□□□□ 0.11
ZNF548-211ENST00000600927 PRKRIP1Q9H875 184 aaPredicted RBP15.73■□□□□ 0.11
ZNF548-211ENST00000600927 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
ZNF548-211ENST00000600927 NME9Q86XW9 330 aa15.71■□□□□ 0.11
ZNF548-211ENST00000600927 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
ZNF548-211ENST00000600927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms