RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	PLEKHG5	O94827	1062 aa		19.06	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	RBM6	P78332	1123 aa	Known RBP	19.05	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	BRD4	O60885	1362 aa	Predicted RBP	19.04	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	BCL9L	Q86UU0	1499 aa		19.03	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	ST20-MTHFS	A0A0A6YYL1	179 aa		19.03	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	TRPC5	Q9UL62	973 aa	Predicted RBP	19.03	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	ALS2	Q96Q42	1657 aa		19.03	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	SLC24A1	O60721	1099 aa		19.02	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	PUS7	Q96PZ0	661 aa	Known RBP	19.02	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	TESK2	Q96S53	571 aa		19.02	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	ZNF692	Q9BU19	519 aa	Predicted RBP	19.02	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	ATAD2	Q6PL18	1390 aa		19.02	■□□□□ 0.64
ARHGEF1-222	ENST00000600517	FAM83G	A6ND36	823 aa		19.01	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	UNC5CL	Q8IV45	518 aa		19.01	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	ABTB2	Q8N961	1025 aa		19.01	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	SLIT2	O94813	1529 aa		19	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	ATRN	O75882	1429 aa		19	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.99	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	NUTM2G	Q5VZR2	741 aa		18.99	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	MARF1	Q9Y4F3	1742 aa	Known RBP	18.99	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	USP6	P35125	1406 aa		18.99	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	SSH2	Q76I76	1423 aa		18.98	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	NLRP13	Q86W25	1043 aa		18.97	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	USP47	Q96K76	1375 aa		18.96	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	GJD4	Q96KN9	370 aa	Predicted RBP	18.96	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	CPSF1	Q10570	1443 aa	Known RBP	18.96	■□□□□ 0.63
ARHGEF1-222	ENST00000600517	ABCA3	Q99758	1704 aa		18.95	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	USP19	O94966	1318 aa		18.95	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	VPS72	Q15906	364 aa		18.94	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	SLC12A5	Q9H2X9	1139 aa		18.94	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	TTC21B	Q7Z4L5	1316 aa		18.94	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	NLRP6	P59044	892 aa		18.93	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	TMC1	Q8TDI8	760 aa		18.93	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	PRDM11	Q9NQV5	511 aa		18.93	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	BTG4	Q9NY30	223 aa		18.93	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	KTN1	Q86UP2	1357 aa	Known RBP	18.93	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	GC	P02774	474 aa		18.92	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	ZC3H6	P61129	1189 aa	Known RBP	18.92	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	KIAA0232	Q92628	1395 aa		18.92	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	RGS12	O14924	1447 aa		18.91	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	CRYBG1	Q9Y4K1	1723 aa		18.91	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	TMF1	P82094	1093 aa		18.91	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	TTC21A	Q8NDW8	1320 aa		18.91	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	TERF2IP	Q9NYB0	399 aa		18.9	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	CD163L1	Q9NR16	1453 aa		18.9	■□□□□ 0.62
ARHGEF1-222	ENST00000600517	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.89	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.89	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	CPD	O75976	1380 aa		18.89	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	NWD2	Q9ULI1	1742 aa		18.88	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	ONECUT3	O60422	494 aa	Predicted RBP	18.88	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	CHRNA2	Q15822	529 aa		18.88	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	COL14A1	Q05707	1796 aa	Known RBP	18.88	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	PLCH1	Q4KWH8	1693 aa		18.87	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	NINL	Q9Y2I6	1382 aa		18.87	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.86	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	CDCA8	Q53HL2	280 aa		18.86	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	CCDC9	Q9Y3X0	531 aa	Known RBP	18.86	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	AKAP12	Q02952	1782 aa		18.86	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	GLI3	P10071	1580 aa		18.85	■□□□□ 0.61
ARHGEF1-222	ENST00000600517		A0A1W2PP64	1363 aa		18.84	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	NRK	Q7Z2Y5	1582 aa		18.84	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	SLIT3	O75094	1523 aa		18.84	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	USP31	Q70CQ4	1352 aa		18.83	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	SPATA31A5	Q5VU36	1347 aa		18.83	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	SPATA31A7	Q8IWB4	1347 aa		18.83	■□□□□ 0.61
ARHGEF1-222	ENST00000600517	KCNH5	Q8NCM2	988 aa		18.83	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	EDC4	Q6P2E9	1401 aa	Known RBP	18.83	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	PIK3C2A	O00443	1686 aa		18.82	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.82	■□□□□ 0.6	4e-7	■■■■□ 23.6
ARHGEF1-222	ENST00000600517	NME9	Q86XW9	330 aa		18.82	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	NRAP	Q86VF7	1730 aa		18.81	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	EVA1C	P58658	441 aa		18.81	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	SEPT12	Q8IYM1	358 aa		18.81	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	ZRANB1	Q9UGI0	708 aa		18.81	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	AATK	Q6ZMQ8	1374 aa		18.81	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	MON2	Q7Z3U7	1717 aa		18.8	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	ARHGEF25	Q86VW2	580 aa		18.8	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	STRN4	Q9NRL3	753 aa		18.8	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	CAMTA1	Q9Y6Y1	1673 aa		18.79	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	HSPA5	P11021	654 aa	Known RBP	18.79	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	ANKRD36B	Q8N2N9	1353 aa		18.79	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	SPATA31A1	Q5TZJ5	1347 aa		18.78	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	FAM98C	Q17RN3	349 aa	Known RBP	18.78	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	ZBTB7C	A1YPR0	619 aa		18.77	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	LARP1	Q6PKG0	1096 aa	Known RBP	18.77	■□□□□ 0.6
ARHGEF1-222	ENST00000600517	SOX12	O15370	315 aa		18.76	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	LMO7	Q8WWI1	1683 aa		18.76	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	AXIN2	Q9Y2T1	843 aa		18.75	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	BARGIN	Q6ZT62	677 aa		18.73	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	KRT27	Q7Z3Y8	459 aa		18.73	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	NFAT5	O94916	1531 aa		18.73	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	COL5A2	P05997	1499 aa	Predicted RBP	18.72	■□□□□ 0.59
ARHGEF1-222	ENST00000600517		A0A0G2JS52	829 aa		18.72	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	MYT1	Q01538	1121 aa		18.72	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	TCP11L2	Q8N4U5	519 aa		18.72	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	CARD14	Q9BXL6	1004 aa		18.72	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	OVOS2	A0A0J9YW53	1432 aa		18.72	■□□□□ 0.59
ARHGEF1-222	ENST00000600517	OVOS2	Q6IE36	1432 aa		18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms