RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CASQ1P31415 396 aa11.95□□□□□ -0.5
NFKB1-212ENST00000600343 CEP120Q8N960 986 aa11.95□□□□□ -0.5
NFKB1-212ENST00000600343 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
NFKB1-212ENST00000600343 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
NFKB1-212ENST00000600343 SATB1Q01826 763 aa11.94□□□□□ -0.5
NFKB1-212ENST00000600343 CARD11Q9BXL7 1154 aa11.94□□□□□ -0.5
NFKB1-212ENST00000600343 ST7Q9NRC1 585 aa11.94□□□□□ -0.5
NFKB1-212ENST00000600343 USP25Q9UHP3 1055 aa11.94□□□□□ -0.5
NFKB1-212ENST00000600343 REC8O95072 547 aa11.93□□□□□ -0.5
NFKB1-212ENST00000600343 FAM43BQ6ZT52 329 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-212ENST00000600343 KIAA1524Q8TCG1 905 aa11.93□□□□□ -0.5
NFKB1-212ENST00000600343 ZNF397Q8NF99 534 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-212ENST00000600343 ST20-MTHFSA0A0A6YYL1 179 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 ADCY5O95622 1261 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 NAA30Q147X3 362 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-212ENST00000600343 ANKRD30AQ9BXX3 1397 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 MYO1CO00159 1063 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 TRIM66O15016 1216 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 GOLGA6L1Q8N7Z2 621 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 E9PCH4 1651 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
NFKB1-212ENST00000600343 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NFKB1-212ENST00000600343 DRC1Q96MC2 740 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 KDM6BO15054 1643 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 SMTNL1A8MU46 457 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 MCCP23508 829 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 MBD3O95983 291 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 PYCARDQ9ULZ3 195 aa11.91□□□□□ -0.5
NFKB1-212ENST00000600343 NSFL1CQ9UNZ2 370 aaKnown RBP11.91□□□□□ -0.5
NFKB1-212ENST00000600343 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-212ENST00000600343 UVSSAQ2YD98 709 aa11.9□□□□□ -0.5
NFKB1-212ENST00000600343 JRKLQ9Y4A0 524 aa11.9□□□□□ -0.5
NFKB1-212ENST00000600343 KIF2CQ99661 725 aa11.9□□□□□ -0.5
NFKB1-212ENST00000600343 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
NFKB1-212ENST00000600343 KIF14Q15058 1648 aa11.9□□□□□ -0.5
NFKB1-212ENST00000600343 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-212ENST00000600343 GOLIM4O00461 696 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 TNNT1P13805 278 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 FAM184AQ8NB25 1140 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 FAM53CQ9NYF3 392 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 DONSONQ9NYP3 566 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
NFKB1-212ENST00000600343 PKP1Q13835 747 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 NEK11Q8NG66 645 aa11.89□□□□□ -0.51
NFKB1-212ENST00000600343 SYAP1Q96A49 352 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-212ENST00000600343 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
NFKB1-212ENST00000600343 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-212ENST00000600343 TDO2P48775 406 aa11.88□□□□□ -0.51
NFKB1-212ENST00000600343 MBD5Q9P267 1494 aa11.88□□□□□ -0.51
NFKB1-212ENST00000600343 PER1O15534 1290 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-212ENST00000600343 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
NFKB1-212ENST00000600343 NBPF20Q3BBV1 942 aa11.88□□□□□ -0.51
NFKB1-212ENST00000600343 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
NFKB1-212ENST00000600343 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
NFKB1-212ENST00000600343 SART3Q15020 963 aaKnown RBP11.87□□□□□ -0.51
NFKB1-212ENST00000600343 PLPPR3Q6T4P5 718 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 KIF1BPQ96EK5 621 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 DEF6Q9H4E7 631 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 TPM3P06753 285 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 CDCA8Q53HL2 280 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
NFKB1-212ENST00000600343 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
NFKB1-212ENST00000600343 C16orf45Q96MC5 204 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-212ENST00000600343 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
NFKB1-212ENST00000600343 CWC15Q9P013 229 aaKnown RBP11.86□□□□□ -0.51
NFKB1-212ENST00000600343 LCMT1Q9UIC8 334 aa11.86□□□□□ -0.51
NFKB1-212ENST00000600343 A0A1B0GUL7 405 aa11.86□□□□□ -0.51
NFKB1-212ENST00000600343 KCNF1Q9H3M0 494 aa11.86□□□□□ -0.51
NFKB1-212ENST00000600343 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-212ENST00000600343 IRF6O14896 467 aa11.86□□□□□ -0.51
NFKB1-212ENST00000600343 PLCD4Q9BRC7 762 aa11.86□□□□□ -0.51
NFKB1-212ENST00000600343 STK26Q9P289 416 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 SUFUQ9UMX1 484 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 KIF1CO43896 1103 aaKnown RBP11.85□□□□□ -0.51
NFKB1-212ENST00000600343 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
NFKB1-212ENST00000600343 CCDC91Q7Z6B0 441 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 GTF3C6Q969F1 213 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 PAXBP1Q9Y5B6 917 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 CASKIN1Q8WXD9 1431 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 TTC31Q49AM3 519 aaPredicted RBP11.85□□□□□ -0.51
NFKB1-212ENST00000600343 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
NFKB1-212ENST00000600343 RTF1Q92541 710 aaKnown RBP11.85□□□□□ -0.51
NFKB1-212ENST00000600343 RLBP1P12271 317 aa11.84□□□□□ -0.51
NFKB1-212ENST00000600343 BMS1Q14692 1282 aaKnown RBP11.84□□□□□ -0.51
NFKB1-212ENST00000600343 FBXO38Q6PIJ6 1188 aa11.84□□□□□ -0.51
NFKB1-212ENST00000600343 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms