RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 MYT1Q01538 1121 aa25.16■■□□□ 1.62
SMG9-210ENST00000600097 ALS2Q96Q42 1657 aa25.14■■□□□ 1.62
SMG9-210ENST00000600097 FAM98CQ17RN3 349 aaKnown RBP25.13■■□□□ 1.61
SMG9-210ENST00000600097 PAK3O75914 559 aaPredicted RBP25.12■■□□□ 1.61
SMG9-210ENST00000600097 COL14A1Q05707 1796 aaKnown RBP25.11■■□□□ 1.61
SMG9-210ENST00000600097 NRAPQ86VF7 1730 aa25.1■■□□□ 1.61
SMG9-210ENST00000600097 BAG6P46379 1132 aa25.09■■□□□ 1.61
SMG9-210ENST00000600097 NUDT16Q96DE0 195 aaKnown RBP25.09■■□□□ 1.61
SMG9-210ENST00000600097 PRDM11Q9NQV5 511 aa25.09■■□□□ 1.61
SMG9-210ENST00000600097 SPATA31A5Q5VU36 1347 aa25.09■■□□□ 1.61
SMG9-210ENST00000600097 SPATA31A7Q8IWB4 1347 aa25.09■■□□□ 1.61
SMG9-210ENST00000600097 ATP7BP35670 1465 aa25.07■■□□□ 1.6
SMG9-210ENST00000600097 ITSN1Q15811 1721 aa25.03■■□□□ 1.6
SMG9-210ENST00000600097 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
SMG9-210ENST00000600097 CDK19Q9BWU1 502 aa25.03■■□□□ 1.6
SMG9-210ENST00000600097 CRYBG1Q9Y4K1 1723 aa25.02■■□□□ 1.6
SMG9-210ENST00000600097 CCDC61Q9Y6R9 512 aa25.01■■□□□ 1.59
SMG9-210ENST00000600097 KIAA0232Q92628 1395 aa25.01■■□□□ 1.59
SMG9-210ENST00000600097 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
SMG9-210ENST00000600097 SPATA31A1Q5TZJ5 1347 aa24.99■■□□□ 1.59
SMG9-210ENST00000600097 ACEP12821 1306 aa24.98■■□□□ 1.59
SMG9-210ENST00000600097 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
SMG9-210ENST00000600097 PLEKHG3A1L390 1219 aa24.97■■□□□ 1.59
SMG9-210ENST00000600097 CHRNA2Q15822 529 aa24.97■■□□□ 1.59
SMG9-210ENST00000600097 FAM182BQ5T319 152 aa24.97■■□□□ 1.59
SMG9-210ENST00000600097 THSD7AQ9UPZ6 1657 aa24.97■■□□□ 1.59
SMG9-210ENST00000600097 ZC3H6P61129 1189 aaKnown RBP24.96■■□□□ 1.59
SMG9-210ENST00000600097 EN1Q05925 392 aaPredicted RBP24.96■■□□□ 1.59
SMG9-210ENST00000600097 NUTM2GQ5VZR2 741 aa24.95■■□□□ 1.58
SMG9-210ENST00000600097 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
SMG9-210ENST00000600097 PSDA5PKW4 1024 aaPredicted RBP24.94■■□□□ 1.58
SMG9-210ENST00000600097 RGPD1P0DJD0 1748 aa24.94■■□□□ 1.58
SMG9-210ENST00000600097 DISP2A7MBM2 1401 aa24.94■■□□□ 1.58
SMG9-210ENST00000600097 LRP5O75197 1615 aa24.94■■□□□ 1.58
SMG9-210ENST00000600097 KIAA1210Q9ULL0 1709 aa24.93■■□□□ 1.58
SMG9-210ENST00000600097 FAM196AQ6ZSG2 479 aa24.93■■□□□ 1.58
SMG9-210ENST00000600097 PHRF1Q9P1Y6 1649 aaKnown RBP24.93■■□□□ 1.58
SMG9-210ENST00000600097 ABTB2Q8N961 1025 aa24.92■■□□□ 1.58
SMG9-210ENST00000600097 TOPAZ1Q8N9V7 1692 aa24.91■■□□□ 1.58
SMG9-210ENST00000600097 EVA1CP58658 441 aa24.91■■□□□ 1.58
SMG9-210ENST00000600097 NBPF1Q3BBV0 1214 aa24.9■■□□□ 1.58
SMG9-210ENST00000600097 BARGINQ6ZT62 677 aa24.9■■□□□ 1.58
SMG9-210ENST00000600097 CPDO75976 1380 aa24.89■■□□□ 1.57
SMG9-210ENST00000600097 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
SMG9-210ENST00000600097 SRPK2P78362 688 aaKnown RBP24.88■■□□□ 1.57
SMG9-210ENST00000600097 NLRP13Q86W25 1043 aa24.88■■□□□ 1.57
SMG9-210ENST00000600097 USP35Q9P2H5 1018 aa24.88■■□□□ 1.57
SMG9-210ENST00000600097 USP19O94966 1318 aa24.87■■□□□ 1.57
SMG9-210ENST00000600097 CENPJQ9HC77 1338 aaPredicted RBP24.87■■□□□ 1.57
SMG9-210ENST00000600097 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
SMG9-210ENST00000600097 TRIM37O94972 964 aa24.86■■□□□ 1.57
SMG9-210ENST00000600097 PDE3BQ13370 1112 aa24.85■■□□□ 1.57
SMG9-210ENST00000600097 R3HDM1Q15032 1099 aaKnown RBP24.85■■□□□ 1.57
SMG9-210ENST00000600097 EZH2Q15910 746 aaKnown RBP24.85■■□□□ 1.57
SMG9-210ENST00000600097 PPIP5K1Q6PFW1 1433 aa24.85■■□□□ 1.57
SMG9-210ENST00000600097 NRKQ7Z2Y5 1582 aa24.84■■□□□ 1.57
SMG9-210ENST00000600097 PARD3Q8TEW0 1356 aa24.84■■□□□ 1.57
SMG9-210ENST00000600097 TCP11L2Q8N4U5 519 aa24.84■■□□□ 1.57
SMG9-210ENST00000600097 CAMKK2Q96RR4 588 aa24.84■■□□□ 1.57
SMG9-210ENST00000600097 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
SMG9-210ENST00000600097 CAMTA1Q9Y6Y1 1673 aa24.83■■□□□ 1.57
SMG9-210ENST00000600097 GCP02774 474 aa24.83■■□□□ 1.57
SMG9-210ENST00000600097 LARP1Q6PKG0 1096 aaKnown RBP24.83■■□□□ 1.57
SMG9-210ENST00000600097 THRAP3Q9Y2W1 955 aaKnown RBP24.83■■□□□ 1.57
SMG9-210ENST00000600097 APBA3O96018 575 aa24.82■■□□□ 1.56
SMG9-210ENST00000600097 CABP2Q9NPB3 220 aa24.81■■□□□ 1.56
SMG9-210ENST00000600097 LMO7Q8WWI1 1683 aa24.79■■□□□ 1.56
SMG9-210ENST00000600097 C11orf95C9JLR9 678 aaPredicted RBP24.77■■□□□ 1.56
SMG9-210ENST00000600097 CABP1Q9NZU7 370 aa24.77■■□□□ 1.56
SMG9-210ENST00000600097 USP6P35125 1406 aa24.76■■□□□ 1.55
SMG9-210ENST00000600097 NLRP6P59044 892 aa24.75■■□□□ 1.55
SMG9-210ENST00000600097 COL5A2P05997 1499 aaPredicted RBP24.75■■□□□ 1.55
SMG9-210ENST00000600097 CRB1P82279 1406 aa24.73■■□□□ 1.55
SMG9-210ENST00000600097 AATKQ6ZMQ8 1374 aa24.73■■□□□ 1.55
SMG9-210ENST00000600097 EVC2Q86UK5 1308 aa24.72■■□□□ 1.55
SMG9-210ENST00000600097 L3MBTL2Q969R5 705 aa24.72■■□□□ 1.55
SMG9-210ENST00000600097 QRICH2Q9H0J4 1663 aa24.72■■□□□ 1.55
SMG9-210ENST00000600097 NBPF14Q5TI25 921 aa24.71■■□□□ 1.55
SMG9-210ENST00000600097 ZBTB7CA1YPR0 619 aa24.7■■□□□ 1.54
SMG9-210ENST00000600097 SLIT3O75094 1523 aa24.69■■□□□ 1.54
SMG9-210ENST00000600097 PARP4Q9UKK3 1724 aaKnown RBP24.68■■□□□ 1.54
SMG9-210ENST00000600097 ZNF692Q9BU19 519 aaPredicted RBP24.67■■□□□ 1.54
SMG9-210ENST00000600097 TOM1L2Q6ZVM7 507 aa24.66■■□□□ 1.54
SMG9-210ENST00000600097 OVOS2A0A0G2JMS6 1433 aa24.66■■□□□ 1.54
SMG9-210ENST00000600097 OVOS2A0A0J9YW53 1432 aa24.66■■□□□ 1.54
SMG9-210ENST00000600097 OVOS2Q6IE36 1432 aa24.66■■□□□ 1.54
SMG9-210ENST00000600097 RREB1Q92766 1687 aa24.66■■□□□ 1.54
SMG9-210ENST00000600097 DDB1Q16531 1140 aa24.65■■□□□ 1.54
SMG9-210ENST00000600097 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.54
SMG9-210ENST00000600097 CDCA7Q9BWT1 371 aaPredicted RBP24.63■■□□□ 1.53
SMG9-210ENST00000600097 ROCK2O75116 1388 aaKnown RBP24.63■■□□□ 1.53
SMG9-210ENST00000600097 WDR17Q8IZU2 1322 aa24.62■■□□□ 1.53
SMG9-210ENST00000600097 TTC21BQ7Z4L5 1316 aa24.61■■□□□ 1.53
SMG9-210ENST00000600097 NUP188Q5SRE5 1749 aa24.61■■□□□ 1.53
SMG9-210ENST00000600097 ARHGEF25Q86VW2 580 aa24.61■■□□□ 1.53
SMG9-210ENST00000600097 AXIN2Q9Y2T1 843 aa24.61■■□□□ 1.53
SMG9-210ENST00000600097 PIK3C2AO00443 1686 aa24.61■■□□□ 1.53
SMG9-210ENST00000600097 TRPM1Q7Z4N2 1603 aa24.61■■□□□ 1.53
SMG9-210ENST00000600097 CPSF1Q10570 1443 aaKnown RBP24.61■■□□□ 1.53
SMG9-210ENST00000600097 TTC21AQ8NDW8 1320 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms