RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 SPATA31A6Q5VVP1 1343 aa22.03■■□□□ 1.12
CALM3-212ENST00000599839 A0A1W2PP64 1363 aa22.02■■□□□ 1.12
CALM3-212ENST00000599839 C11orf95C9JLR9 678 aaPredicted RBP22.01■■□□□ 1.11
CALM3-212ENST00000599839 SLC24A1O60721 1099 aa22.01■■□□□ 1.11
CALM3-212ENST00000599839 NUTM2BA6NNL0 878 aaPredicted RBP22■■□□□ 1.11
CALM3-212ENST00000599839 NUTM2EB1AL46 878 aaPredicted RBP22■■□□□ 1.11
CALM3-212ENST00000599839 PAK3O75914 559 aaPredicted RBP22■■□□□ 1.11
CALM3-212ENST00000599839 NUTM2AQ8IVF1 878 aaPredicted RBP22■■□□□ 1.11
CALM3-212ENST00000599839 LMOD2Q6P5Q4 547 aa21.99■■□□□ 1.11
CALM3-212ENST00000599839 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
CALM3-212ENST00000599839 KTN1Q86UP2 1357 aaKnown RBP21.99■■□□□ 1.11
CALM3-212ENST00000599839 NINLQ9Y2I6 1382 aa21.99■■□□□ 1.11
CALM3-212ENST00000599839 PLEKHG5O94827 1062 aa21.99■■□□□ 1.11
CALM3-212ENST00000599839 CABLES1Q8TDN4 633 aa21.98■■□□□ 1.11
CALM3-212ENST00000599839 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
CALM3-212ENST00000599839 NUTM2GQ5VZR2 741 aa21.96■■□□□ 1.11
CALM3-212ENST00000599839 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
CALM3-212ENST00000599839 CDCA8Q53HL2 280 aa21.95■■□□□ 1.1
CALM3-212ENST00000599839 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
CALM3-212ENST00000599839 BRD4O60885 1362 aaPredicted RBP21.94■■□□□ 1.1
CALM3-212ENST00000599839 TTC21BQ7Z4L5 1316 aa21.94■■□□□ 1.1
CALM3-212ENST00000599839 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
CALM3-212ENST00000599839 ADAMTS2O95450 1211 aa21.93■■□□□ 1.1
CALM3-212ENST00000599839 KIF20BQ96Q89 1820 aa21.93■■□□□ 1.1
CALM3-212ENST00000599839 PLCH1Q4KWH8 1693 aa21.92■■□□□ 1.1
CALM3-212ENST00000599839 HDGFL2Q7Z4V5 671 aaPredicted RBP21.92■■□□□ 1.1
CALM3-212ENST00000599839 ABTB2Q8N961 1025 aa21.92■■□□□ 1.1
CALM3-212ENST00000599839 EDC4Q6P2E9 1401 aaKnown RBP21.92■■□□□ 1.1
CALM3-212ENST00000599839 KIF7Q2M1P5 1343 aa21.91■■□□□ 1.1
CALM3-212ENST00000599839 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
CALM3-212ENST00000599839 SLIT3O75094 1523 aa21.91■■□□□ 1.1
CALM3-212ENST00000599839 MEX3CQ5U5Q3 659 aaKnown RBP21.89■■□□□ 1.1
CALM3-212ENST00000599839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.89■■□□□ 1.1
CALM3-212ENST00000599839 USP19O94966 1318 aa21.89■■□□□ 1.09
CALM3-212ENST00000599839 RGS17Q9UGC6 210 aaPredicted RBP21.88■■□□□ 1.09
CALM3-212ENST00000599839 ZRANB1Q9UGI0 708 aa21.88■■□□□ 1.09
CALM3-212ENST00000599839 TTC21AQ8NDW8 1320 aa21.88■■□□□ 1.09
CALM3-212ENST00000599839 NME9Q86XW9 330 aa21.87■■□□□ 1.09
CALM3-212ENST00000599839 ZEB1P37275 1124 aaPredicted RBP21.87■■□□□ 1.09
CALM3-212ENST00000599839 C8orf37Q96NL8 207 aa21.87■■□□□ 1.09
CALM3-212ENST00000599839 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
CALM3-212ENST00000599839 CCDC7Q96M83 1385 aa21.86■■□□□ 1.09
CALM3-212ENST00000599839 NRAPQ86VF7 1730 aa21.86■■□□□ 1.09
CALM3-212ENST00000599839 CARD14Q9BXL6 1004 aa21.86■■□□□ 1.09
CALM3-212ENST00000599839 COL14A1Q05707 1796 aaKnown RBP21.85■■□□□ 1.09
CALM3-212ENST00000599839 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
CALM3-212ENST00000599839 NLRP6P59044 892 aa21.85■■□□□ 1.09
CALM3-212ENST00000599839 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
CALM3-212ENST00000599839 OVOS2A0A0J9YW53 1432 aa21.85■■□□□ 1.09
CALM3-212ENST00000599839 OVOS2Q6IE36 1432 aa21.85■■□□□ 1.09
CALM3-212ENST00000599839 NSD3Q9BZ95 1437 aa21.85■■□□□ 1.09
CALM3-212ENST00000599839 NFAT5O94916 1531 aa21.84■■□□□ 1.09
CALM3-212ENST00000599839 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.84■■□□□ 1.09
CALM3-212ENST00000599839 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
CALM3-212ENST00000599839 USP31Q70CQ4 1352 aa21.83■■□□□ 1.09
CALM3-212ENST00000599839 NLRP13Q86W25 1043 aa21.83■■□□□ 1.08
CALM3-212ENST00000599839 LTN1O94822 1766 aa21.83■■□□□ 1.08
CALM3-212ENST00000599839 AFF2P51816 1311 aa21.83■■□□□ 1.08
CALM3-212ENST00000599839 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
CALM3-212ENST00000599839 SLIT2O94813 1529 aa21.82■■□□□ 1.08
CALM3-212ENST00000599839 ANKRD26Q9UPS8 1709 aa21.82■■□□□ 1.08
CALM3-212ENST00000599839 KIAA0232Q92628 1395 aa21.81■■□□□ 1.08
CALM3-212ENST00000599839 COL18A1P39060 1754 aa21.8■■□□□ 1.08
CALM3-212ENST00000599839 NGLY1Q96IV0 654 aa21.8■■□□□ 1.08
CALM3-212ENST00000599839 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
CALM3-212ENST00000599839 RGPD5Q99666 1765 aa21.79■■□□□ 1.08
CALM3-212ENST00000599839 PANK3Q9H999 370 aa21.79■■□□□ 1.08
CALM3-212ENST00000599839 FAM83GA6ND36 823 aa21.78■■□□□ 1.08
CALM3-212ENST00000599839 GCP02774 474 aa21.78■■□□□ 1.08
CALM3-212ENST00000599839 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
CALM3-212ENST00000599839 SOX12O15370 315 aa21.77■■□□□ 1.08
CALM3-212ENST00000599839 FNBP4Q8N3X1 1017 aaPredicted RBP21.77■■□□□ 1.08
CALM3-212ENST00000599839 POTEAQ6S8J7 498 aa21.76■■□□□ 1.07
CALM3-212ENST00000599839 FYB1O15117 783 aa21.75■■□□□ 1.07
CALM3-212ENST00000599839 CPDO75976 1380 aa21.75■■□□□ 1.07
CALM3-212ENST00000599839 CHRNA2Q15822 529 aa21.75■■□□□ 1.07
CALM3-212ENST00000599839 GGNBP2Q9H3C7 697 aa21.75■■□□□ 1.07
CALM3-212ENST00000599839 CAMTA1Q9Y6Y1 1673 aa21.74■■□□□ 1.07
CALM3-212ENST00000599839 PRDM11Q9NQV5 511 aa21.74■■□□□ 1.07
CALM3-212ENST00000599839 USP21Q9UK80 565 aa21.74■■□□□ 1.07
CALM3-212ENST00000599839 ATRNO75882 1429 aa21.72■■□□□ 1.07
CALM3-212ENST00000599839 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
CALM3-212ENST00000599839 GLI3P10071 1580 aa21.71■■□□□ 1.07
CALM3-212ENST00000599839 ZBTB7CA1YPR0 619 aa21.71■■□□□ 1.07
CALM3-212ENST00000599839 FBLN1P23142 703 aa21.7■■□□□ 1.06
CALM3-212ENST00000599839 KCNH5Q8NCM2 988 aa21.7■■□□□ 1.06
CALM3-212ENST00000599839 COG3Q96JB2 828 aa21.7■■□□□ 1.06
CALM3-212ENST00000599839 BTG4Q9NY30 223 aa21.7■■□□□ 1.06
CALM3-212ENST00000599839 PEAK1Q9H792 1746 aa21.69■■□□□ 1.06
CALM3-212ENST00000599839 CGNL1Q0VF96 1302 aa21.68■■□□□ 1.06
CALM3-212ENST00000599839 ILDR2Q71H61 639 aa21.68■■□□□ 1.06
CALM3-212ENST00000599839 ARHGEF25Q86VW2 580 aa21.68■■□□□ 1.06
CALM3-212ENST00000599839 UNC5CLQ8IV45 518 aa21.68■■□□□ 1.06
CALM3-212ENST00000599839 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
CALM3-212ENST00000599839 MAP2P11137 1827 aaKnown RBP21.67■■□□□ 1.06
CALM3-212ENST00000599839 ABCC6O95255 1503 aa21.67■■□□□ 1.06
CALM3-212ENST00000599839 AATKQ6ZMQ8 1374 aa21.66■■□□□ 1.06
CALM3-212ENST00000599839 PER1O15534 1290 aaPredicted RBP21.65■■□□□ 1.06
CALM3-212ENST00000599839 QTRT2Q9H974 415 aaKnown RBP21.65■■□□□ 1.06
CALM3-212ENST00000599839 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms