RNA–Protein interactions for RNA: ENST00000599644.1

SIPA1L3-208, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-208	ENST00000599644	NBPF1	Q3BBV0	1214 aa		28.47	■■■□□ 2.15
SIPA1L3-208	ENST00000599644	ZRANB1	Q9UGI0	708 aa		28.45	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	ITSN1	Q15811	1721 aa		28.45	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	NRAP	Q86VF7	1730 aa		28.43	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	KIAA1210	Q9ULL0	1709 aa		28.43	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	BLM	P54132	1417 aa	Predicted RBP	28.43	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	COL14A1	Q05707	1796 aa	Known RBP	28.42	■■■□□ 2.14
SIPA1L3-208	ENST00000599644		A0A0G2JS52	829 aa		28.42	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	MYT1	Q01538	1121 aa		28.42	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	FAM98C	Q17RN3	349 aa	Known RBP	28.42	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	KRT27	Q7Z3Y8	459 aa		28.42	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	CRYBG1	Q9Y4K1	1723 aa		28.41	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	DEFB132	Q7Z7B7	95 aa		28.4	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	PRDM11	Q9NQV5	511 aa		28.4	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	NUTM2G	Q5VZR2	741 aa		28.39	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	CCDC61	Q9Y6R9	512 aa		28.39	■■■□□ 2.14
SIPA1L3-208	ENST00000599644	ACE	P12821	1306 aa		28.39	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	NBPF8	Q3BBV2	869 aa		28.38	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	SF3B2	Q13435	895 aa	Known RBP	28.36	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	POLR3A	O14802	1390 aa	Predicted RBP	28.36	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	CHRNA2	Q15822	529 aa		28.35	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	SPATA31A5	Q5VU36	1347 aa		28.35	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	SPATA31A7	Q8IWB4	1347 aa		28.35	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	TOPAZ1	Q8N9V7	1692 aa		28.35	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	KIAA0232	Q92628	1395 aa		28.35	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	PLEKHG3	A1L390	1219 aa		28.34	■■■□□ 2.13
SIPA1L3-208	ENST00000599644	ZC3H6	P61129	1189 aa	Known RBP	28.32	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.32	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	SRPK2	P78362	688 aa	Known RBP	28.31	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	L3MBTL2	Q969R5	705 aa		28.31	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.3	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	FAM182B	Q5T319	152 aa		28.29	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	CABP2	Q9NPB3	220 aa		28.29	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	STRN4	Q9NRL3	753 aa		28.29	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	ABTB2	Q8N961	1025 aa		28.28	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	SIN3A	Q96ST3	1273 aa		28.28	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	PPIP5K1	Q6PFW1	1433 aa		28.26	■■■□□ 2.12
SIPA1L3-208	ENST00000599644	SPATA31A1	Q5TZJ5	1347 aa		28.24	■■■□□ 2.11
SIPA1L3-208	ENST00000599644	QRICH2	Q9H0J4	1663 aa		28.23	■■■□□ 2.11
SIPA1L3-208	ENST00000599644	THSD7A	Q9UPZ6	1657 aa		28.23	■■■□□ 2.11
SIPA1L3-208	ENST00000599644	BAG6	P46379	1132 aa		28.22	■■■□□ 2.11
SIPA1L3-208	ENST00000599644	NEUROD1	Q13562	356 aa		28.22	■■■□□ 2.11
SIPA1L3-208	ENST00000599644	EVA1C	P58658	441 aa		28.21	■■■□□ 2.11
SIPA1L3-208	ENST00000599644	CABP1	Q9NZU7	370 aa		28.2	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	USP35	Q9P2H5	1018 aa		28.2	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	NRK	Q7Z2Y5	1582 aa		28.2	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	USP19	O94966	1318 aa		28.19	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	NLRP13	Q86W25	1043 aa		28.18	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	CAMTA1	Q9Y6Y1	1673 aa		28.16	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	CPD	O75976	1380 aa		28.16	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	GC	P02774	474 aa		28.16	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	EN1	Q05925	392 aa	Predicted RBP	28.16	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	SSH2	Q76I76	1423 aa		28.16	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	LARP1	Q6PKG0	1096 aa	Known RBP	28.15	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	TRPM1	Q7Z4N2	1603 aa		28.14	■■■□□ 2.1
SIPA1L3-208	ENST00000599644	RGPD1	P0DJD0	1748 aa		28.13	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	EVC2	Q86UK5	1308 aa		28.13	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	USP6	P35125	1406 aa		28.12	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	PSD	A5PKW4	1024 aa	Predicted RBP	28.12	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	LMO7	Q8WWI1	1683 aa		28.12	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	BRD4	O60885	1362 aa	Predicted RBP	28.11	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	ROCK2	O75116	1388 aa	Known RBP	28.11	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	NLRP6	P59044	892 aa		28.11	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	BARGIN	Q6ZT62	677 aa		28.11	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	ZBTB7C	A1YPR0	619 aa		28.1	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	FAM196A	Q6ZSG2	479 aa		28.1	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	TRIM37	O94972	964 aa		28.09	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	TCP11L2	Q8N4U5	519 aa		28.08	■■■□□ 2.09
SIPA1L3-208	ENST00000599644	TNS1	Q9HBL0	1735 aa	Known RBP	28.07	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	PDE3B	Q13370	1112 aa		28.07	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	EZH2	Q15910	746 aa	Known RBP	28.05	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	COL5A2	P05997	1499 aa	Predicted RBP	28.04	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	DISP2	A7MBM2	1401 aa		28.04	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	THRAP3	Q9Y2W1	955 aa	Known RBP	28.02	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	PIK3C2A	O00443	1686 aa		28.02	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	SLIT3	O75094	1523 aa		28.02	■■■□□ 2.08
SIPA1L3-208	ENST00000599644	APBA3	O96018	575 aa		28.01	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	CAMKK2	Q96RR4	588 aa		28.01	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	AATK	Q6ZMQ8	1374 aa		28	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	TTC21B	Q7Z4L5	1316 aa		28	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	R3HDM1	Q15032	1099 aa	Known RBP	27.99	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	ZNF692	Q9BU19	519 aa	Predicted RBP	27.99	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	CRB1	P82279	1406 aa		27.98	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	LRP5	O75197	1615 aa		27.96	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	SOX12	O15370	315 aa		27.96	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	AXIN2	Q9Y2T1	843 aa		27.96	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	AKAP12	Q02952	1782 aa		27.96	■■■□□ 2.07
SIPA1L3-208	ENST00000599644	COL18A1	P39060	1754 aa		27.95	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	TOM1L2	Q6ZVM7	507 aa		27.94	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	PARP4	Q9UKK3	1724 aa	Known RBP	27.93	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	ARHGEF25	Q86VW2	580 aa		27.93	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	CARD11	Q9BXL7	1154 aa		27.93	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	CPSF1	Q10570	1443 aa	Known RBP	27.92	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	KTN1	Q86UP2	1357 aa	Known RBP	27.92	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	TTC21A	Q8NDW8	1320 aa		27.92	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	KCNH5	Q8NCM2	988 aa		27.9	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	PARD3	Q8TEW0	1356 aa		27.89	■■■□□ 2.06
SIPA1L3-208	ENST00000599644	WDR17	Q8IZU2	1322 aa		27.89	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	RGPD5	Q99666	1765 aa		27.88	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	SBNO2	Q9Y2G9	1366 aa		27.87	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms