RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 ESPNB1AK53 854 aa24.37■■□□□ 1.49
ARHGEF1-218ENST00000599589 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
ARHGEF1-218ENST00000599589 MVPQ14764 893 aaKnown RBP24.37■■□□□ 1.49
ARHGEF1-218ENST00000599589 HSCBQ8IWL3 235 aa24.37■■□□□ 1.49
ARHGEF1-218ENST00000599589 ZNF692Q9BU19 519 aaPredicted RBP24.37■■□□□ 1.49
ARHGEF1-218ENST00000599589 NEXMIFQ5QGS0 1516 aa24.36■■□□□ 1.49
ARHGEF1-218ENST00000599589 TMEM132EQ6IEE7 984 aa24.36■■□□□ 1.49
ARHGEF1-218ENST00000599589 WDR63Q8IWG1 891 aa24.35■■□□□ 1.49
ARHGEF1-218ENST00000599589 IQSEC2Q5JU85 1478 aa24.35■■□□□ 1.49
ARHGEF1-218ENST00000599589 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
ARHGEF1-218ENST00000599589 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
ARHGEF1-218ENST00000599589 ZMYND15Q9H091 742 aa24.34■■□□□ 1.49
ARHGEF1-218ENST00000599589 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
ARHGEF1-218ENST00000599589 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
ARHGEF1-218ENST00000599589 ZFYVE9O95405 1425 aa24.32■■□□□ 1.48
ARHGEF1-218ENST00000599589 MORC1Q86VD1 984 aa24.32■■□□□ 1.48
ARHGEF1-218ENST00000599589 FTSJ3Q8IY81 847 aaKnown RBP24.31■■□□□ 1.48
ARHGEF1-218ENST00000599589 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
ARHGEF1-218ENST00000599589 PREX1Q8TCU6 1659 aa24.31■■□□□ 1.48
ARHGEF1-218ENST00000599589 ZKSCAN2Q63HK3 967 aa24.3■■□□□ 1.48
ARHGEF1-218ENST00000599589 DZIP1LQ8IYY4 767 aaKnown RBP24.3■■□□□ 1.48
ARHGEF1-218ENST00000599589 ISY1Q9ULR0 285 aaKnown RBP24.3■■□□□ 1.48
ARHGEF1-218ENST00000599589 AGLP35573 1532 aa24.3■■□□□ 1.48
ARHGEF1-218ENST00000599589 TRIM44Q96DX7 344 aaPredicted RBP24.29■■□□□ 1.48
ARHGEF1-218ENST00000599589 DDIT3P35638 169 aa24.29■■□□□ 1.48
ARHGEF1-218ENST00000599589 GAS2L3Q86XJ1 694 aa24.29■■□□□ 1.48
ARHGEF1-218ENST00000599589 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
ARHGEF1-218ENST00000599589 QRICH2Q9H0J4 1663 aa24.28■■□□□ 1.48
ARHGEF1-218ENST00000599589 TNPO1Q92973 898 aaKnown RBP24.27■■□□□ 1.48
ARHGEF1-218ENST00000599589 NSD3Q9BZ95 1437 aa24.27■■□□□ 1.48
ARHGEF1-218ENST00000599589 FBXO31Q5XUX0 539 aaPredicted RBP24.26■■□□□ 1.47
ARHGEF1-218ENST00000599589 TMEM131LA2VDJ0 1609 aa24.25■■□□□ 1.47
ARHGEF1-218ENST00000599589 CCDC27Q2M243 656 aa24.25■■□□□ 1.47
ARHGEF1-218ENST00000599589 PUS7Q96PZ0 661 aaKnown RBP24.25■■□□□ 1.47
ARHGEF1-218ENST00000599589 HDAC1Q13547 482 aaPredicted RBP24.24■■□□□ 1.47
ARHGEF1-218ENST00000599589 MTHFSP49914 203 aa24.22■■□□□ 1.47
ARHGEF1-218ENST00000599589 RBM25P49756 843 aaKnown RBP24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 ITPRIPQ8IWB1 547 aa24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 SNX21Q969T3 373 aa24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 SMC4Q9NTJ3 1288 aa24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 TRIM27P14373 513 aa24.21■■□□□ 1.47
ARHGEF1-218ENST00000599589 HSP90AB1P08238 724 aaKnown RBP24.2■■□□□ 1.47
ARHGEF1-218ENST00000599589 SMC5Q8IY18 1101 aa24.2■■□□□ 1.47
ARHGEF1-218ENST00000599589 GBP4Q96PP9 640 aa24.2■■□□□ 1.47
ARHGEF1-218ENST00000599589 SLC12A5Q9H2X9 1139 aa24.2■■□□□ 1.47
ARHGEF1-218ENST00000599589 MYO5BQ9ULV0 1848 aa24.18■■□□□ 1.46
ARHGEF1-218ENST00000599589 RAB3GAP1Q15042 981 aa24.18■■□□□ 1.46
ARHGEF1-218ENST00000599589 DDX19BQ9UMR2 479 aa24.18■■□□□ 1.46
ARHGEF1-218ENST00000599589 ARHGEF28Q8N1W1 1705 aaKnown RBP24.18■■□□□ 1.46
ARHGEF1-218ENST00000599589 STAG3Q9UJ98 1225 aa24.18■■□□□ 1.46
ARHGEF1-218ENST00000599589 CIZ1Q9ULV3 898 aaPredicted RBP24.17■■□□□ 1.46
ARHGEF1-218ENST00000599589 CFAP53Q96M91 514 aa24.17■■□□□ 1.46
ARHGEF1-218ENST00000599589 SKOR2Q2VWA4 1001 aaPredicted RBP24.16■■□□□ 1.46
ARHGEF1-218ENST00000599589 TPM2P07951 284 aa24.16■■□□□ 1.46
ARHGEF1-218ENST00000599589 EXOSC9Q06265 439 aaKnown RBP24.16■■□□□ 1.46
ARHGEF1-218ENST00000599589 FOXD4L1Q9NU39 408 aa24.16■■□□□ 1.46
ARHGEF1-218ENST00000599589 U2AF1L5P0DN76 240 aaPredicted RBP24.15■■□□□ 1.46
ARHGEF1-218ENST00000599589 U2AF1Q01081 240 aaKnown RBP eCLIP24.15■■□□□ 1.46
ARHGEF1-218ENST00000599589 SSH1Q8WYL5 1049 aa24.14■■□□□ 1.46
ARHGEF1-218ENST00000599589 STK26Q9P289 416 aa24.14■■□□□ 1.45
ARHGEF1-218ENST00000599589 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.45
ARHGEF1-218ENST00000599589 ATF7IPQ6VMQ6 1270 aa24.14■■□□□ 1.45
ARHGEF1-218ENST00000599589 MLECQ14165 292 aa24.13■■□□□ 1.45
ARHGEF1-218ENST00000599589 KIF13AQ9H1H9 1805 aa24.13■■□□□ 1.45
ARHGEF1-218ENST00000599589 TULP4Q9NRJ4 1543 aa24.13■■□□□ 1.45
ARHGEF1-218ENST00000599589 CT47B1P0C2W7 299 aaPredicted RBP24.13■■□□□ 1.45
ARHGEF1-218ENST00000599589 LNPKQ9C0E8 428 aa24.13■■□□□ 1.45
ARHGEF1-218ENST00000599589 TMEM57Q8N5G2 664 aa24.12■■□□□ 1.45
ARHGEF1-218ENST00000599589 NOB1Q9ULX3 412 aaKnown RBP24.12■■□□□ 1.45
ARHGEF1-218ENST00000599589 ARHGEF40Q8TER5 1519 aa24.12■■□□□ 1.45
ARHGEF1-218ENST00000599589 CD2BP2O95400 341 aaKnown RBP24.11■■□□□ 1.45
ARHGEF1-218ENST00000599589 NUCB1Q02818 461 aa24.11■■□□□ 1.45
ARHGEF1-218ENST00000599589 SPATA31D1Q6ZQQ2 1576 aa24.11■■□□□ 1.45
ARHGEF1-218ENST00000599589 KIAA1211Q6ZU35 1233 aa24.11■■□□□ 1.45
ARHGEF1-218ENST00000599589 KIF2CQ99661 725 aa24.11■■□□□ 1.45
ARHGEF1-218ENST00000599589 PTMSP20962 102 aa24.1■■□□□ 1.45
ARHGEF1-218ENST00000599589 CCDC173Q0VFZ6 552 aa24.1■■□□□ 1.45
ARHGEF1-218ENST00000599589 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
ARHGEF1-218ENST00000599589 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
ARHGEF1-218ENST00000599589 ZBTB40Q9NUA8 1239 aa24.1■■□□□ 1.45
ARHGEF1-218ENST00000599589 ADGRB2O60241 1585 aa24.1■■□□□ 1.45
ARHGEF1-218ENST00000599589 NCBP3Q53F19 620 aaKnown RBP24.09■■□□□ 1.45
ARHGEF1-218ENST00000599589 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
ARHGEF1-218ENST00000599589 ANKRD36BQ8N2N9 1353 aa24.09■■□□□ 1.45
ARHGEF1-218ENST00000599589 CABP2Q9NPB3 220 aa24.09■■□□□ 1.45
ARHGEF1-218ENST00000599589 NASPP49321 788 aaPredicted RBP24.08■■□□□ 1.45
ARHGEF1-218ENST00000599589 PPP1R9BQ96SB3 815 aa24.07■■□□□ 1.44
ARHGEF1-218ENST00000599589 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
ARHGEF1-218ENST00000599589 PTPRMP28827 1452 aa24.07■■□□□ 1.44
ARHGEF1-218ENST00000599589 USP32Q8NFA0 1604 aa24.07■■□□□ 1.44
ARHGEF1-218ENST00000599589 SSFA2P28290 1259 aa24.07■■□□□ 1.44
ARHGEF1-218ENST00000599589 ALKQ9UM73 1620 aa24.07■■□□□ 1.44
ARHGEF1-218ENST00000599589 CHD1LQ86WJ1 897 aa24.06■■□□□ 1.44
ARHGEF1-218ENST00000599589 PDCL3Q9H2J4 239 aa24.06■■□□□ 1.44
ARHGEF1-218ENST00000599589 ESF1Q9H501 851 aaKnown RBP24.06■■□□□ 1.44
ARHGEF1-218ENST00000599589 PRAM1Q96QH2 718 aa24.06■■□□□ 1.44
ARHGEF1-218ENST00000599589 ZSCAN30Q86W11 494 aa24.05■■□□□ 1.44
ARHGEF1-218ENST00000599589 K7ELQ4 463 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms