RNA–Protein interactions for RNA: ENST00000599429.5

GTPBP3-220, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-220ENST00000599429 HAP1P54257 671 aaPredicted RBP25.06■■□□□ 1.6
GTPBP3-220ENST00000599429 ATAD2Q6PL18 1390 aa25.05■■□□□ 1.6
GTPBP3-220ENST00000599429 SOCS7O14512 581 aa25.04■■□□□ 1.6
GTPBP3-220ENST00000599429 USP47Q96K76 1375 aa25.04■■□□□ 1.6
GTPBP3-220ENST00000599429 USP21Q9UK80 565 aa25.03■■□□□ 1.6
GTPBP3-220ENST00000599429 PUS7Q96PZ0 661 aaKnown RBP25.02■■□□□ 1.6
GTPBP3-220ENST00000599429 QTRT2Q9H974 415 aaKnown RBP25.02■■□□□ 1.6
GTPBP3-220ENST00000599429 ABCA3Q99758 1704 aa25.02■■□□□ 1.6
GTPBP3-220ENST00000599429 SLC24A1O60721 1099 aa25.01■■□□□ 1.59
GTPBP3-220ENST00000599429 BRD4O60885 1362 aaPredicted RBP25.01■■□□□ 1.59
GTPBP3-220ENST00000599429 NUTM2GQ5VZR2 741 aa25■■□□□ 1.59
GTPBP3-220ENST00000599429 ABTB2Q8N961 1025 aa25■■□□□ 1.59
GTPBP3-220ENST00000599429 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
GTPBP3-220ENST00000599429 USP6P35125 1406 aa25■■□□□ 1.59
GTPBP3-220ENST00000599429 RXRBP28702 533 aa24.99■■□□□ 1.59
GTPBP3-220ENST00000599429 BCL9LQ86UU0 1499 aa24.97■■□□□ 1.59
GTPBP3-220ENST00000599429 SSH2Q76I76 1423 aa24.97■■□□□ 1.59
GTPBP3-220ENST00000599429 CRYBG1Q9Y4K1 1723 aa24.97■■□□□ 1.59
GTPBP3-220ENST00000599429 CPSF1Q10570 1443 aaKnown RBP24.96■■□□□ 1.59
GTPBP3-220ENST00000599429 FAM83GA6ND36 823 aa24.96■■□□□ 1.59
GTPBP3-220ENST00000599429 TRPC5Q9UL62 973 aaPredicted RBP24.96■■□□□ 1.59
GTPBP3-220ENST00000599429 SLIT2O94813 1529 aa24.96■■□□□ 1.59
GTPBP3-220ENST00000599429 AKAP12Q02952 1782 aa24.95■■□□□ 1.59
GTPBP3-220ENST00000599429 RBM6P78332 1123 aaKnown RBP24.95■■□□□ 1.58
GTPBP3-220ENST00000599429 TMC1Q8TDI8 760 aa24.95■■□□□ 1.58
GTPBP3-220ENST00000599429 SLC12A5Q9H2X9 1139 aa24.94■■□□□ 1.58
GTPBP3-220ENST00000599429 TMF1P82094 1093 aa24.93■■□□□ 1.58
GTPBP3-220ENST00000599429 NLRP13Q86W25 1043 aa24.93■■□□□ 1.58
GTPBP3-220ENST00000599429 UNC5CLQ8IV45 518 aa24.93■■□□□ 1.58
GTPBP3-220ENST00000599429 ATRNO75882 1429 aa24.93■■□□□ 1.58
GTPBP3-220ENST00000599429 TTC21BQ7Z4L5 1316 aa24.92■■□□□ 1.58
GTPBP3-220ENST00000599429 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
GTPBP3-220ENST00000599429 CD163L1Q9NR16 1453 aa24.9■■□□□ 1.58
GTPBP3-220ENST00000599429 USP19O94966 1318 aa24.9■■□□□ 1.58
GTPBP3-220ENST00000599429 PHRF1Q9P1Y6 1649 aaKnown RBP24.9■■□□□ 1.58
GTPBP3-220ENST00000599429 NLRP6P59044 892 aa24.89■■□□□ 1.58
GTPBP3-220ENST00000599429 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.89■■□□□ 1.57
GTPBP3-220ENST00000599429 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
GTPBP3-220ENST00000599429 ZC3H6P61129 1189 aaKnown RBP24.88■■□□□ 1.57
GTPBP3-220ENST00000599429 HDGFL2Q7Z4V5 671 aaPredicted RBP24.88■■□□□ 1.57
GTPBP3-220ENST00000599429 PLCH1Q4KWH8 1693 aa24.88■■□□□ 1.57
GTPBP3-220ENST00000599429 TTC21AQ8NDW8 1320 aa24.87■■□□□ 1.57
GTPBP3-220ENST00000599429 NWD2Q9ULI1 1742 aa24.87■■□□□ 1.57
GTPBP3-220ENST00000599429 PRDM11Q9NQV5 511 aa24.87■■□□□ 1.57
GTPBP3-220ENST00000599429 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
GTPBP3-220ENST00000599429 KIAA0232Q92628 1395 aa24.87■■□□□ 1.57
GTPBP3-220ENST00000599429 MON2Q7Z3U7 1717 aa24.86■■□□□ 1.57
GTPBP3-220ENST00000599429 COL14A1Q05707 1796 aaKnown RBP24.86■■□□□ 1.57
GTPBP3-220ENST00000599429 GCP02774 474 aa24.86■■□□□ 1.57
GTPBP3-220ENST00000599429 GJD4Q96KN9 370 aaPredicted RBP24.86■■□□□ 1.57
GTPBP3-220ENST00000599429 BTG4Q9NY30 223 aa24.86■■□□□ 1.57
GTPBP3-220ENST00000599429 PIK3C2AO00443 1686 aa24.85■■□□□ 1.57
GTPBP3-220ENST00000599429 NINLQ9Y2I6 1382 aa24.85■■□□□ 1.57
GTPBP3-220ENST00000599429 EIF4G2P78344 907 aaKnown RBP eCLIP24.85■■□□□ 1.57
GTPBP3-220ENST00000599429 CDCA8Q53HL2 280 aa24.85■■□□□ 1.57
GTPBP3-220ENST00000599429 NRKQ7Z2Y5 1582 aa24.84■■□□□ 1.57
GTPBP3-220ENST00000599429 A0A1W2PP64 1363 aa24.83■■□□□ 1.57
GTPBP3-220ENST00000599429 CHRNA2Q15822 529 aa24.83■■□□□ 1.57
GTPBP3-220ENST00000599429 VPS72Q15906 364 aa24.83■■□□□ 1.57
GTPBP3-220ENST00000599429 HSPA5P11021 654 aaKnown RBP24.82■■□□□ 1.56
GTPBP3-220ENST00000599429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.82■■□□□ 1.56
GTPBP3-220ENST00000599429 RGS12O14924 1447 aa24.81■■□□□ 1.56
GTPBP3-220ENST00000599429 SLIT3O75094 1523 aa24.81■■□□□ 1.56
GTPBP3-220ENST00000599429 CPDO75976 1380 aa24.8■■□□□ 1.56
GTPBP3-220ENST00000599429 NRAPQ86VF7 1730 aa24.8■■□□□ 1.56
GTPBP3-220ENST00000599429 EDC4Q6P2E9 1401 aaKnown RBP24.79■■□□□ 1.56
GTPBP3-220ENST00000599429 NME9Q86XW9 330 aa24.78■■□□□ 1.56
GTPBP3-220ENST00000599429 ZRANB1Q9UGI0 708 aa24.78■■□□□ 1.56
GTPBP3-220ENST00000599429 GLI3P10071 1580 aa24.78■■□□□ 1.56
GTPBP3-220ENST00000599429 USP31Q70CQ4 1352 aa24.78■■□□□ 1.56
GTPBP3-220ENST00000599429 CCDC9Q9Y3X0 531 aaKnown RBP24.77■■□□□ 1.56
GTPBP3-220ENST00000599429 ANKRD36BQ8N2N9 1353 aa24.77■■□□□ 1.56
GTPBP3-220ENST00000599429 KCNH5Q8NCM2 988 aa24.76■■□□□ 1.55
GTPBP3-220ENST00000599429 CAMTA1Q9Y6Y1 1673 aa24.73■■□□□ 1.55
GTPBP3-220ENST00000599429 ZBTB7CA1YPR0 619 aa24.72■■□□□ 1.55
GTPBP3-220ENST00000599429 ONECUT3O60422 494 aaPredicted RBP24.72■■□□□ 1.55
GTPBP3-220ENST00000599429 USP54Q70EL1 1684 aa24.72■■□□□ 1.55
GTPBP3-220ENST00000599429 LMO7Q8WWI1 1683 aa24.72■■□□□ 1.55
GTPBP3-220ENST00000599429 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
GTPBP3-220ENST00000599429 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
GTPBP3-220ENST00000599429 SOX12O15370 315 aa24.71■■□□□ 1.55
GTPBP3-220ENST00000599429 EVA1CP58658 441 aa24.71■■□□□ 1.55
GTPBP3-220ENST00000599429 ARHGEF25Q86VW2 580 aa24.71■■□□□ 1.55
GTPBP3-220ENST00000599429 STRN4Q9NRL3 753 aa24.71■■□□□ 1.55
GTPBP3-220ENST00000599429 AATKQ6ZMQ8 1374 aa24.7■■□□□ 1.55
GTPBP3-220ENST00000599429 MYOM1P52179 1685 aa24.69■■□□□ 1.54
GTPBP3-220ENST00000599429 NFAT5O94916 1531 aa24.68■■□□□ 1.54
GTPBP3-220ENST00000599429 COL18A1P39060 1754 aa24.67■■□□□ 1.54
GTPBP3-220ENST00000599429 SEPT12Q8IYM1 358 aa24.67■■□□□ 1.54
GTPBP3-220ENST00000599429 POLR3GLQ9BT43 218 aa24.67■■□□□ 1.54
GTPBP3-220ENST00000599429 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 FAM98CQ17RN3 349 aaKnown RBP24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 LARP1Q6PKG0 1096 aaKnown RBP24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 AXIN2Q9Y2T1 843 aa24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 OVOS2A0A0J9YW53 1432 aa24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 OVOS2Q6IE36 1432 aa24.66■■□□□ 1.54
GTPBP3-220ENST00000599429 UPF1Q92900 1129 aaKnown RBP eCLIP24.65■■□□□ 1.54
GTPBP3-220ENST00000599429 C11orf95C9JLR9 678 aaPredicted RBP24.64■■□□□ 1.54
GTPBP3-220ENST00000599429 FYB1O15117 783 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms