RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 SF3B2Q13435 895 aaKnown RBP21.2■□□□□ 0.98
EBI3-202ENST00000599339 BTG4Q9NY30 223 aa21.2■□□□□ 0.98
EBI3-202ENST00000599339 KIAA1210Q9ULL0 1709 aa21.2■□□□□ 0.98
EBI3-202ENST00000599339 COL14A1Q05707 1796 aaKnown RBP21.2■□□□□ 0.98
EBI3-202ENST00000599339 A0A0G2JS52 829 aa21.19■□□□□ 0.98
EBI3-202ENST00000599339 MYT1Q01538 1121 aa21.19■□□□□ 0.98
EBI3-202ENST00000599339 KRT27Q7Z3Y8 459 aa21.18■□□□□ 0.98
EBI3-202ENST00000599339 NRAPQ86VF7 1730 aa21.18■□□□□ 0.98
EBI3-202ENST00000599339 CDK19Q9BWU1 502 aa21.17■□□□□ 0.98
EBI3-202ENST00000599339 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
EBI3-202ENST00000599339 CCDC61Q9Y6R9 512 aa21.15■□□□□ 0.98
EBI3-202ENST00000599339 FAM98CQ17RN3 349 aaKnown RBP21.14■□□□□ 0.97
EBI3-202ENST00000599339 CRYBG1Q9Y4K1 1723 aa21.14■□□□□ 0.97
EBI3-202ENST00000599339 POLR3AO14802 1390 aaPredicted RBP21.11■□□□□ 0.97
EBI3-202ENST00000599339 ACEP12821 1306 aa21.11■□□□□ 0.97
EBI3-202ENST00000599339 SPATA31A5Q5VU36 1347 aa21.11■□□□□ 0.97
EBI3-202ENST00000599339 SPATA31A7Q8IWB4 1347 aa21.11■□□□□ 0.97
EBI3-202ENST00000599339 TOPAZ1Q8N9V7 1692 aa21.11■□□□□ 0.97
EBI3-202ENST00000599339 PLEKHG3A1L390 1219 aa21.1■□□□□ 0.97
EBI3-202ENST00000599339 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
EBI3-202ENST00000599339 NBPF8Q3BBV2 869 aa21.1■□□□□ 0.97
EBI3-202ENST00000599339 DEFB132Q7Z7B7 95 aa21.1■□□□□ 0.97
EBI3-202ENST00000599339 KIAA0232Q92628 1395 aa21.09■□□□□ 0.97
EBI3-202ENST00000599339 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
EBI3-202ENST00000599339 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.97
EBI3-202ENST00000599339 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
EBI3-202ENST00000599339 BAG6P46379 1132 aa21.07■□□□□ 0.96
EBI3-202ENST00000599339 NUTM2GQ5VZR2 741 aa21.07■□□□□ 0.96
EBI3-202ENST00000599339 ZC3H6P61129 1189 aaKnown RBP21.05■□□□□ 0.96
EBI3-202ENST00000599339 CHRNA2Q15822 529 aa21.05■□□□□ 0.96
EBI3-202ENST00000599339 ABTB2Q8N961 1025 aa21.05■□□□□ 0.96
EBI3-202ENST00000599339 SRCAPQ6ZRS2 3230 aa21.05■□□□□ 0.96
EBI3-202ENST00000599339 STRN4Q9NRL3 753 aa21.04■□□□□ 0.96
EBI3-202ENST00000599339 PPIP5K1Q6PFW1 1433 aa21.04■□□□□ 0.96
EBI3-202ENST00000599339 SPATA31A1Q5TZJ5 1347 aa21.04■□□□□ 0.96
EBI3-202ENST00000599339 THSD7AQ9UPZ6 1657 aa21.02■□□□□ 0.96
EBI3-202ENST00000599339 BRD4O60885 1362 aaPredicted RBP21.02■□□□□ 0.96
EBI3-202ENST00000599339 EVA1CP58658 441 aa21.02■□□□□ 0.96
EBI3-202ENST00000599339 NLRP13Q86W25 1043 aa21.01■□□□□ 0.95
EBI3-202ENST00000599339 CABP2Q9NPB3 220 aa21.01■□□□□ 0.95
EBI3-202ENST00000599339 QRICH2Q9H0J4 1663 aa21.01■□□□□ 0.95
EBI3-202ENST00000599339 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
EBI3-202ENST00000599339 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
EBI3-202ENST00000599339 NRKQ7Z2Y5 1582 aa21■□□□□ 0.95
EBI3-202ENST00000599339 CPDO75976 1380 aa20.99■□□□□ 0.95
EBI3-202ENST00000599339 USP19O94966 1318 aa20.99■□□□□ 0.95
EBI3-202ENST00000599339 SSH2Q76I76 1423 aa20.97■□□□□ 0.95
EBI3-202ENST00000599339 FAM182BQ5T319 152 aa20.97■□□□□ 0.95
EBI3-202ENST00000599339 USP35Q9P2H5 1018 aa20.97■□□□□ 0.95
EBI3-202ENST00000599339 FAM196AQ6ZSG2 479 aa20.96■□□□□ 0.95
EBI3-202ENST00000599339 BARGINQ6ZT62 677 aa20.96■□□□□ 0.95
EBI3-202ENST00000599339 EVC2Q86UK5 1308 aa20.96■□□□□ 0.95
EBI3-202ENST00000599339 GCP02774 474 aa20.95■□□□□ 0.94
EBI3-202ENST00000599339 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
EBI3-202ENST00000599339 CAMTA1Q9Y6Y1 1673 aa20.94■□□□□ 0.94
EBI3-202ENST00000599339 EN1Q05925 392 aaPredicted RBP20.94■□□□□ 0.94
EBI3-202ENST00000599339 PDE3BQ13370 1112 aa20.94■□□□□ 0.94
EBI3-202ENST00000599339 SIN3AQ96ST3 1273 aa20.94■□□□□ 0.94
EBI3-202ENST00000599339 ROCK2O75116 1388 aaKnown RBP20.94■□□□□ 0.94
EBI3-202ENST00000599339 DISP2A7MBM2 1401 aa20.94■□□□□ 0.94
EBI3-202ENST00000599339 USP6P35125 1406 aa20.94■□□□□ 0.94
EBI3-202ENST00000599339 TRPM1Q7Z4N2 1603 aa20.93■□□□□ 0.94
EBI3-202ENST00000599339 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
EBI3-202ENST00000599339 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
EBI3-202ENST00000599339 TCP11L2Q8N4U5 519 aa20.93■□□□□ 0.94
EBI3-202ENST00000599339 NLRP6P59044 892 aa20.92■□□□□ 0.94
EBI3-202ENST00000599339 LARP1Q6PKG0 1096 aaKnown RBP20.92■□□□□ 0.94
EBI3-202ENST00000599339 THRAP3Q9Y2W1 955 aaKnown RBP20.92■□□□□ 0.94
EBI3-202ENST00000599339 TNS1Q9HBL0 1735 aaKnown RBP20.91■□□□□ 0.94
EBI3-202ENST00000599339 PSDA5PKW4 1024 aaPredicted RBP20.89■□□□□ 0.93
EBI3-202ENST00000599339 TRIM37O94972 964 aa20.89■□□□□ 0.93
EBI3-202ENST00000599339 LRP5O75197 1615 aa20.89■□□□□ 0.93
EBI3-202ENST00000599339 COL5A2P05997 1499 aaPredicted RBP20.88■□□□□ 0.93
EBI3-202ENST00000599339 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
EBI3-202ENST00000599339 ZNF692Q9BU19 519 aaPredicted RBP20.88■□□□□ 0.93
EBI3-202ENST00000599339 SLIT3O75094 1523 aa20.87■□□□□ 0.93
EBI3-202ENST00000599339 AATKQ6ZMQ8 1374 aa20.86■□□□□ 0.93
EBI3-202ENST00000599339 PARD3Q8TEW0 1356 aa20.86■□□□□ 0.93
EBI3-202ENST00000599339 C11orf95C9JLR9 678 aaPredicted RBP20.86■□□□□ 0.93
EBI3-202ENST00000599339 APBA3O96018 575 aa20.86■□□□□ 0.93
EBI3-202ENST00000599339 CRB1P82279 1406 aa20.86■□□□□ 0.93
EBI3-202ENST00000599339 EZH2Q15910 746 aaKnown RBP20.85■□□□□ 0.93
EBI3-202ENST00000599339 PIK3C2AO00443 1686 aa20.83■□□□□ 0.93
EBI3-202ENST00000599339 R3HDM1Q15032 1099 aaKnown RBP20.83■□□□□ 0.93
EBI3-202ENST00000599339 KCNH5Q8NCM2 988 aa20.83■□□□□ 0.93
EBI3-202ENST00000599339 CAMKK2Q96RR4 588 aa20.83■□□□□ 0.93
EBI3-202ENST00000599339 PARP4Q9UKK3 1724 aaKnown RBP20.83■□□□□ 0.92
EBI3-202ENST00000599339 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
EBI3-202ENST00000599339 TTC21AQ8NDW8 1320 aa20.82■□□□□ 0.92
EBI3-202ENST00000599339 TOM1L2Q6ZVM7 507 aa20.81■□□□□ 0.92
EBI3-202ENST00000599339 AKAP12Q02952 1782 aa20.81■□□□□ 0.92
EBI3-202ENST00000599339 SBNO2Q9Y2G9 1366 aa20.8■□□□□ 0.92
EBI3-202ENST00000599339 CPSF1Q10570 1443 aaKnown RBP20.79■□□□□ 0.92
EBI3-202ENST00000599339 KTN1Q86UP2 1357 aaKnown RBP20.79■□□□□ 0.92
EBI3-202ENST00000599339 WDR17Q8IZU2 1322 aa20.78■□□□□ 0.92
EBI3-202ENST00000599339 CARD11Q9BXL7 1154 aa20.78■□□□□ 0.92
EBI3-202ENST00000599339 OVOS2A0A0G2JMS6 1433 aa20.78■□□□□ 0.92
EBI3-202ENST00000599339 OVOS2A0A0J9YW53 1432 aa20.78■□□□□ 0.92
EBI3-202ENST00000599339 OVOS2Q6IE36 1432 aa20.78■□□□□ 0.92
EBI3-202ENST00000599339 DDB1Q16531 1140 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms