RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	EVA1B	Q9NVM1	165 aa		12.64	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	CTH	P32929	405 aa		12.62	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	S1PR4	O95977	384 aa		12.61	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	KCNH2	Q12809	1159 aa		12.61	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	KCNC4	Q03721	635 aa		12.6	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	FKBPL	Q9UIM3	349 aa		12.6	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	POM121C	A8CG34	1229 aa		12.59	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	PNMA1	Q8ND90	353 aa		12.59	□□□□□ -0.39
SOX2-OT-231	ENST00000599082	WASHC4	Q2M389	1173 aa		12.58	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	CCDC24	Q8N4L8	307 aa		12.57	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	VAC14	Q08AM6	782 aa		12.56	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.56	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.55	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	LCE2B	O14633	110 aa		12.54	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	CCDC82	Q8N4S0	544 aa		12.54	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	FCF1	Q9Y324	198 aa	Known RBP	12.54	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	ARMC2	Q8NEN0	867 aa		12.53	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	ARID3A	Q99856	593 aa		12.53	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	UNC93B1	Q9H1C4	597 aa		12.53	□□□□□ -0.4
SOX2-OT-231	ENST00000599082	LAPTM4A	Q15012	233 aa		12.52	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	PPEF1	O14829	653 aa	Predicted RBP	12.51	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	ADAMTS19	Q8TE59	1207 aa		12.51	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	GLMN	Q92990	594 aa		12.51	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	FBXO45	P0C2W1	286 aa		12.5	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.5	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	ZBBX	A8MT70	800 aa		12.49	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	NR1H3	Q13133	447 aa		12.49	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	PDXDC2P	Q6P474	469 aa		12.49	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	CALR3	Q96L12	384 aa	Known RBP	12.49	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	RNF223	E7ERA6	249 aa		12.48	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	HDGFL1	Q5TGJ6	251 aa		12.48	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	NBPF14	Q5TI25	921 aa		12.48	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	ALG2	Q9H553	416 aa		12.47	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	TRAF7	Q6Q0C0	670 aa		12.46	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	OCSTAMP	Q9BR26	566 aa		12.46	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	SERPINA10	Q9UK55	444 aa		12.46	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	GPSM3	Q9Y4H4	160 aa		12.46	□□□□□ -0.41
SOX2-OT-231	ENST00000599082	GGCX	P38435	758 aa		12.45	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	PPP1R18	Q6NYC8	613 aa		12.45	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	ANKLE1	Q8NAG6	615 aa		12.45	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	CCDC97	Q96F63	343 aa	Predicted RBP	12.45	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	GFRA3	O60609	400 aa		12.44	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	SOX11	P35716	441 aa		12.44	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	PTK2	Q05397	1052 aa		12.44	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	BAP1	Q92560	729 aa		12.44	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	PLA2G2C	Q5R387	149 aa		12.43	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	SH3BP5L	Q7L8J4	393 aa		12.43	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.43	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	SEMA3F	Q13275	785 aa		12.41	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	LINC01559	Q495D7	138 aa		12.41	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	ARX	Q96QS3	562 aa		12.41	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	ZNF511	Q8NB15	262 aa		12.4	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	ARHGAP9	Q9BRR9	750 aa		12.4	□□□□□ -0.42
SOX2-OT-231	ENST00000599082	SH3RF1	Q7Z6J0	888 aa		12.39	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	ZBTB24	O43167	697 aa	Predicted RBP	12.38	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	ADAM32	Q8TC27	787 aa		12.38	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	FOXJ1	Q92949	421 aa		12.38	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	SH3BP2	P78314	561 aa		12.37	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	TRIM32	Q13049	653 aa		12.36	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	C4orf48	Q5BLP8	95 aa		12.36	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	ZBTB33	Q86T24	672 aa		12.36	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	BPHL	Q86WA6	291 aa	Predicted RBP	12.36	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	UCN2	Q96RP3	112 aa		12.36	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	CARD14	Q9BXL6	1004 aa		12.35	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	PCDHB9	Q9Y5E1	797 aa		12.35	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	MAGEB6P1	A0A0J9YX57	407 aa		12.34	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	NRG2	O14511	850 aa	Predicted RBP	12.34	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	AGER	Q15109	404 aa		12.34	□□□□□ -0.43
SOX2-OT-231	ENST00000599082	RPIA	P49247	311 aa		12.33	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	PPP1R12C	Q9BZL4	782 aa		12.33	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	PRKD2	Q9BZL6	878 aa		12.33	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	MCCD1	P59942	119 aa	Predicted RBP	12.32	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	SKOR1	P84550	965 aa		12.32	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	HOMEZ	Q8IX15	550 aa		12.32	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	EMID1	Q96A84	441 aa	Predicted RBP	12.32	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	ERFE	Q4G0M1	354 aa		12.31	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	LIAT1	Q6ZQX7	453 aa		12.31	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	ZNF592	Q92610	1267 aa		12.31	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	PALM3	A6NDB9	673 aa	Predicted RBP	12.3	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	WNT7B	P56706	349 aa		12.3	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	CFAP70	Q5T0N1	1121 aa		12.3	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	C1QTNF2	Q9BXJ5	285 aa		12.3	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	CEP126	Q9P2H0	1117 aa		12.3	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	PIK3CD	O00329	1044 aa		12.29	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	TBC1D9	Q6ZT07	1266 aa		12.29	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	TFIP11	Q9UBB9	837 aa	Known RBP	12.29	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	DZIP3	Q86Y13	1208 aa	Known RBP	12.28	□□□□□ -0.44
SOX2-OT-231	ENST00000599082	CD2BP2	O95400	341 aa	Known RBP	12.27	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	TRMT44	Q8IYL2	757 aa	Known RBP	12.26	□□□□□ -0.45
SOX2-OT-231	ENST00000599082		V9GY48	417 aa	Predicted RBP	12.26	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	ATP9B	O43861	1147 aa		12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	RFX1	P22670	979 aa		12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	VARS	P26640	1264 aa	Known RBP	12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	PHTF2	Q8N3S3	785 aa		12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	NFATC2IP	Q8NCF5	419 aa		12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	FAM174A	Q8TBP5	190 aa		12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	SLC10A4	Q96EP9	437 aa		12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.25	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	LMOD1	P29536	600 aa	Predicted RBP	12.24	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms