RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 VPS72Q15906 364 aa26.58■■□□□ 1.85
SNRPA-205ENST00000598923 FAM83GA6ND36 823 aa26.57■■□□□ 1.84
SNRPA-205ENST00000598923 NGDNQ8NEJ9 315 aaKnown RBP26.57■■□□□ 1.84
SNRPA-205ENST00000598923 NUDT16Q96DE0 195 aaKnown RBP26.57■■□□□ 1.84
SNRPA-205ENST00000598923 COL14A1Q05707 1796 aaKnown RBP26.56■■□□□ 1.84
SNRPA-205ENST00000598923 NBPF8Q3BBV2 869 aa26.56■■□□□ 1.84
SNRPA-205ENST00000598923 CDK19Q9BWU1 502 aa26.55■■□□□ 1.84
SNRPA-205ENST00000598923 ONECUT3O60422 494 aaPredicted RBP26.52■■□□□ 1.84
SNRPA-205ENST00000598923 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
SNRPA-205ENST00000598923 CCDC125Q86Z20 511 aa26.52■■□□□ 1.84
SNRPA-205ENST00000598923 POLR3AO14802 1390 aaPredicted RBP26.51■■□□□ 1.83
SNRPA-205ENST00000598923 PHRF1Q9P1Y6 1649 aaKnown RBP26.5■■□□□ 1.83
SNRPA-205ENST00000598923 CENPJQ9HC77 1338 aaPredicted RBP26.49■■□□□ 1.83
SNRPA-205ENST00000598923 PAK3O75914 559 aaPredicted RBP26.49■■□□□ 1.83
SNRPA-205ENST00000598923 SEPT12Q8IYM1 358 aa26.48■■□□□ 1.83
SNRPA-205ENST00000598923 CCDC61Q9Y6R9 512 aa26.48■■□□□ 1.83
SNRPA-205ENST00000598923 QRICH2Q9H0J4 1663 aa26.47■■□□□ 1.83
SNRPA-205ENST00000598923 BTG4Q9NY30 223 aa26.47■■□□□ 1.83
SNRPA-205ENST00000598923 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
SNRPA-205ENST00000598923 CCDC9Q9Y3X0 531 aaKnown RBP26.46■■□□□ 1.83
SNRPA-205ENST00000598923 ACEP12821 1306 aa26.45■■□□□ 1.83
SNRPA-205ENST00000598923 TRPM1Q7Z4N2 1603 aa26.45■■□□□ 1.82
SNRPA-205ENST00000598923 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
SNRPA-205ENST00000598923 CARD11Q9BXL7 1154 aa26.43■■□□□ 1.82
SNRPA-205ENST00000598923 SRPK2P78362 688 aaKnown RBP26.41■■□□□ 1.82
SNRPA-205ENST00000598923 CCER1Q8TC90 406 aaPredicted RBP26.41■■□□□ 1.82
SNRPA-205ENST00000598923 KRT27Q7Z3Y8 459 aa26.39■■□□□ 1.82
SNRPA-205ENST00000598923 PRDM11Q9NQV5 511 aa26.39■■□□□ 1.82
SNRPA-205ENST00000598923 KIAA0232Q92628 1395 aa26.38■■□□□ 1.81
SNRPA-205ENST00000598923 CABP2Q9NPB3 220 aa26.38■■□□□ 1.81
SNRPA-205ENST00000598923 PPIP5K1Q6PFW1 1433 aa26.38■■□□□ 1.81
SNRPA-205ENST00000598923 SPATA31A5Q5VU36 1347 aa26.38■■□□□ 1.81
SNRPA-205ENST00000598923 SPATA31A7Q8IWB4 1347 aa26.38■■□□□ 1.81
SNRPA-205ENST00000598923 THSD7AQ9UPZ6 1657 aa26.38■■□□□ 1.81
SNRPA-205ENST00000598923 FAM98CQ17RN3 349 aaKnown RBP26.37■■□□□ 1.81
SNRPA-205ENST00000598923 NRKQ7Z2Y5 1582 aa26.37■■□□□ 1.81
SNRPA-205ENST00000598923 NUTM2GQ5VZR2 741 aa26.36■■□□□ 1.81
SNRPA-205ENST00000598923 ZRANB1Q9UGI0 708 aa26.33■■□□□ 1.81
SNRPA-205ENST00000598923 CLSPNQ9HAW4 1339 aa26.33■■□□□ 1.81
SNRPA-205ENST00000598923 ZC3H6P61129 1189 aaKnown RBP26.32■■□□□ 1.8
SNRPA-205ENST00000598923 CHRNA2Q15822 529 aa26.32■■□□□ 1.8
SNRPA-205ENST00000598923 ABTB2Q8N961 1025 aa26.32■■□□□ 1.8
SNRPA-205ENST00000598923 USP19O94966 1318 aa26.32■■□□□ 1.8
SNRPA-205ENST00000598923 A0A0G2JS52 829 aa26.31■■□□□ 1.8
SNRPA-205ENST00000598923 MYT1Q01538 1121 aa26.31■■□□□ 1.8
SNRPA-205ENST00000598923 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
SNRPA-205ENST00000598923 LMO7Q8WWI1 1683 aa26.31■■□□□ 1.8
SNRPA-205ENST00000598923 BRD4O60885 1362 aaPredicted RBP26.31■■□□□ 1.8
SNRPA-205ENST00000598923 DEFB132Q7Z7B7 95 aa26.3■■□□□ 1.8
SNRPA-205ENST00000598923 SPATA31A1Q5TZJ5 1347 aa26.3■■□□□ 1.8
SNRPA-205ENST00000598923 CPDO75976 1380 aa26.29■■□□□ 1.8
SNRPA-205ENST00000598923 SF3B2Q13435 895 aaKnown RBP26.28■■□□□ 1.8
SNRPA-205ENST00000598923 CABP1Q9NZU7 370 aa26.28■■□□□ 1.8
SNRPA-205ENST00000598923 CAMTA1Q9Y6Y1 1673 aa26.28■■□□□ 1.8
SNRPA-205ENST00000598923 USP6P35125 1406 aa26.27■■□□□ 1.8
SNRPA-205ENST00000598923 RGPD1P0DJD0 1748 aa26.27■■□□□ 1.8
SNRPA-205ENST00000598923 NLRP13Q86W25 1043 aa26.26■■□□□ 1.79
SNRPA-205ENST00000598923 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
SNRPA-205ENST00000598923 SRCAPQ6ZRS2 3230 aa26.26■■□□□ 1.79
SNRPA-205ENST00000598923 STRN4Q9NRL3 753 aa26.25■■□□□ 1.79
SNRPA-205ENST00000598923 AKAP12Q02952 1782 aa26.25■■□□□ 1.79
SNRPA-205ENST00000598923 SSH2Q76I76 1423 aa26.24■■□□□ 1.79
SNRPA-205ENST00000598923 PIK3C2AO00443 1686 aa26.23■■□□□ 1.79
SNRPA-205ENST00000598923 GCP02774 474 aa26.23■■□□□ 1.79
SNRPA-205ENST00000598923 TNS1Q9HBL0 1735 aaKnown RBP26.22■■□□□ 1.79
SNRPA-205ENST00000598923 SLIT3O75094 1523 aa26.22■■□□□ 1.79
SNRPA-205ENST00000598923 FAM182BQ5T319 152 aa26.21■■□□□ 1.79
SNRPA-205ENST00000598923 ST20-MTHFSA0A0A6YYL1 179 aa26.2■■□□□ 1.78
SNRPA-205ENST00000598923 EVA1CP58658 441 aa26.19■■□□□ 1.78
SNRPA-205ENST00000598923 BAG6P46379 1132 aa26.18■■□□□ 1.78
SNRPA-205ENST00000598923 BARGINQ6ZT62 677 aa26.18■■□□□ 1.78
SNRPA-205ENST00000598923 LARP1Q6PKG0 1096 aaKnown RBP26.17■■□□□ 1.78
SNRPA-205ENST00000598923 COL18A1P39060 1754 aa26.17■■□□□ 1.78
SNRPA-205ENST00000598923 COL5A2P05997 1499 aaPredicted RBP26.17■■□□□ 1.78
SNRPA-205ENST00000598923 NLRP6P59044 892 aa26.16■■□□□ 1.78
SNRPA-205ENST00000598923 USP35Q9P2H5 1018 aa26.15■■□□□ 1.78
SNRPA-205ENST00000598923 SBNO2Q9Y2G9 1366 aa26.15■■□□□ 1.78
SNRPA-205ENST00000598923 DISP2A7MBM2 1401 aa26.14■■□□□ 1.78
SNRPA-205ENST00000598923 ZNF692Q9BU19 519 aaPredicted RBP26.14■■□□□ 1.78
SNRPA-205ENST00000598923 PARP4Q9UKK3 1724 aaKnown RBP26.14■■□□□ 1.77
SNRPA-205ENST00000598923 CPSF1Q10570 1443 aaKnown RBP26.14■■□□□ 1.77
SNRPA-205ENST00000598923 AATKQ6ZMQ8 1374 aa26.13■■□□□ 1.77
SNRPA-205ENST00000598923 TCP11L2Q8N4U5 519 aa26.13■■□□□ 1.77
SNRPA-205ENST00000598923 TMC1Q8TDI8 760 aa26.13■■□□□ 1.77
SNRPA-205ENST00000598923 MON2Q7Z3U7 1717 aa26.13■■□□□ 1.77
SNRPA-205ENST00000598923 FAM196AQ6ZSG2 479 aa26.11■■□□□ 1.77
SNRPA-205ENST00000598923 THRAP3Q9Y2W1 955 aaKnown RBP26.11■■□□□ 1.77
SNRPA-205ENST00000598923 TTC21BQ7Z4L5 1316 aa26.11■■□□□ 1.77
SNRPA-205ENST00000598923 EN1Q05925 392 aaPredicted RBP26.1■■□□□ 1.77
SNRPA-205ENST00000598923 RGPD5Q99666 1765 aa26.1■■□□□ 1.77
SNRPA-205ENST00000598923 USP47Q96K76 1375 aa26.09■■□□□ 1.77
SNRPA-205ENST00000598923 CRB1P82279 1406 aa26.09■■□□□ 1.77
SNRPA-205ENST00000598923 TESK2Q96S53 571 aa26.09■■□□□ 1.77
SNRPA-205ENST00000598923 TTC21AQ8NDW8 1320 aa26.08■■□□□ 1.77
SNRPA-205ENST00000598923 WNK3Q9BYP7 1800 aa26.07■■□□□ 1.76
SNRPA-205ENST00000598923 SLC12A5Q9H2X9 1139 aa26.06■■□□□ 1.76
SNRPA-205ENST00000598923 LRP5O75197 1615 aa26.06■■□□□ 1.76
SNRPA-205ENST00000598923 USP54Q70EL1 1684 aa26.06■■□□□ 1.76
SNRPA-205ENST00000598923 SLC24A1O60721 1099 aa26.05■■□□□ 1.76
SNRPA-205ENST00000598923 TRIM37O94972 964 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms