RNA–Protein interactions for RNA: ENST00000598867.1

SOX2-OT-230, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 348 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-230ENST00000598867 USP17L22D6RA61 530 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 USP17L19D6RCP7 530 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 USP17L20D6RJB6 530 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 HOXB1P14653 301 aaPredicted RBP8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 SSFA2P28290 1259 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 ARID4AP29374 1257 aaPredicted RBP8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 PSEN2P49810 448 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 USP17L24Q0WX57 530 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 CRTC2Q53ET0 693 aaPredicted RBP8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 MORN1Q5T089 497 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 DEPDC4Q8N2C3 294 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 SLAIN2Q9P270 581 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 FKBPLQ9UIM3 349 aa8.33□□□□□ -1.08
SOX2-OT-230ENST00000598867 RNF40O75150 1001 aa8.32□□□□□ -1.08
SOX2-OT-230ENST00000598867 Q3C1V9 767 aa8.32□□□□□ -1.08
SOX2-OT-230ENST00000598867 DNAJC14Q6Y2X3 702 aaPredicted RBP8.32□□□□□ -1.08
SOX2-OT-230ENST00000598867 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
SOX2-OT-230ENST00000598867 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
SOX2-OT-230ENST00000598867 KMT5BQ4FZB7 885 aa8.31□□□□□ -1.08
SOX2-OT-230ENST00000598867 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
SOX2-OT-230ENST00000598867 ERCC3P19447 782 aa8.3□□□□□ -1.08
SOX2-OT-230ENST00000598867 FAM69CQ0P6D2 419 aa8.3□□□□□ -1.08
SOX2-OT-230ENST00000598867 PTK7Q13308 1070 aa8.3□□□□□ -1.08
SOX2-OT-230ENST00000598867 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
SOX2-OT-230ENST00000598867 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
SOX2-OT-230ENST00000598867 IGSF5Q9NSI5 407 aa8.3□□□□□ -1.08
SOX2-OT-230ENST00000598867 SOWAHDA6NJG2 315 aa8.29□□□□□ -1.08
SOX2-OT-230ENST00000598867 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
SOX2-OT-230ENST00000598867 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
SOX2-OT-230ENST00000598867 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
SOX2-OT-230ENST00000598867 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
SOX2-OT-230ENST00000598867 RASA1P20936 1047 aa8.28□□□□□ -1.08
SOX2-OT-230ENST00000598867 NCOA4Q13772 614 aa8.28□□□□□ -1.08
SOX2-OT-230ENST00000598867 RNF19BQ6ZMZ0 732 aa8.28□□□□□ -1.08
SOX2-OT-230ENST00000598867 ATP5J2-PTCD1G3V325 749 aa8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 ACTN4O43707 911 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 SERPINB4P48594 390 aa8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 MRRFQ96E11 262 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 MAP10Q9P2G4 905 aa8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 USP35Q9P2H5 1018 aa8.27□□□□□ -1.09
SOX2-OT-230ENST00000598867 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 DMRTA1Q5VZB9 504 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 BLOC1S3Q6QNY0 202 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 POTEEQ6S8J3 1075 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 ANKMY2Q8IV38 441 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 SCUBE2Q9NQ36 999 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
SOX2-OT-230ENST00000598867 LAPTM4BQ86VI4 370 aa8.25□□□□□ -1.09
SOX2-OT-230ENST00000598867 RNF135Q8IUD6 432 aa8.25□□□□□ -1.09
SOX2-OT-230ENST00000598867 ZNF16P17020 682 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-230ENST00000598867 MARSP56192 900 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-230ENST00000598867 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
SOX2-OT-230ENST00000598867 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
SOX2-OT-230ENST00000598867 SIRT1Q96EB6 747 aa8.24□□□□□ -1.09
SOX2-OT-230ENST00000598867 BCL2L13Q9BXK5 485 aa8.24□□□□□ -1.09
SOX2-OT-230ENST00000598867 UNC13AQ9UPW8 1703 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 NACADO15069 1562 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 SNPHO15079 494 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 LZTS3O60299 673 aaPredicted RBP8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 SCNN1AP37088 669 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 KCNH2Q12809 1159 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 DPYDQ12882 1025 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 PTPRNQ16849 979 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 SWI5Q1ZZU3 235 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 BRICD5Q6PL45 260 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 ZNF592Q92610 1267 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 VPS9D1Q9Y2B5 631 aa8.23□□□□□ -1.09
SOX2-OT-230ENST00000598867 JUNDP17535 347 aa8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 OGFOD1Q8N543 542 aa8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 ZFRQ96KR1 1074 aaKnown RBP8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 BIN2Q9UBW5 565 aaPredicted RBP8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 AXIN2Q9Y2T1 843 aa8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 GPSM3Q9Y4H4 160 aa8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 PCDHB9Q9Y5E1 797 aa8.22□□□□□ -1.09
SOX2-OT-230ENST00000598867 CTHP32929 405 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 CLDN10P78369 228 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 PTK2Q05397 1052 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 EML3Q32P44 896 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 MAMSTRQ6ZN01 415 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 GIPC2Q8TF65 315 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 OCSTAMPQ9BR26 566 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 NBPF3Q9H094 633 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 CHIC2Q9UKJ5 165 aa8.21□□□□□ -1.1
SOX2-OT-230ENST00000598867 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
SOX2-OT-230ENST00000598867 PRR14Q9BWN1 585 aa8.2□□□□□ -1.1
SOX2-OT-230ENST00000598867 MAP7D1Q3KQU3 841 aa8.19□□□□□ -1.1
SOX2-OT-230ENST00000598867 PDXDC2PQ6P474 469 aa8.19□□□□□ -1.1
SOX2-OT-230ENST00000598867 TRAF7Q6Q0C0 670 aa8.19□□□□□ -1.1
SOX2-OT-230ENST00000598867 NPAS4Q8IUM7 802 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms