RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 A0A0G2JS52 829 aa27.36■■□□□ 1.97
SNRPA-204ENST00000598452 MYT1Q01538 1121 aa27.36■■□□□ 1.97
SNRPA-204ENST00000598452 BLMP54132 1417 aaPredicted RBP27.35■■□□□ 1.97
SNRPA-204ENST00000598452 FAM98CQ17RN3 349 aaKnown RBP27.35■■□□□ 1.97
SNRPA-204ENST00000598452 NUTM2GQ5VZR2 741 aa27.35■■□□□ 1.97
SNRPA-204ENST00000598452 KRT27Q7Z3Y8 459 aa27.35■■□□□ 1.97
SNRPA-204ENST00000598452 ZRANB1Q9UGI0 708 aa27.35■■□□□ 1.97
SNRPA-204ENST00000598452 NRAPQ86VF7 1730 aa27.34■■□□□ 1.97
SNRPA-204ENST00000598452 KIAA1210Q9ULL0 1709 aa27.34■■□□□ 1.97
SNRPA-204ENST00000598452 PRDM11Q9NQV5 511 aa27.34■■□□□ 1.97
SNRPA-204ENST00000598452 CCDC61Q9Y6R9 512 aa27.34■■□□□ 1.97
SNRPA-204ENST00000598452 ACEP12821 1306 aa27.34■■□□□ 1.97
SNRPA-204ENST00000598452 DEFB132Q7Z7B7 95 aa27.33■■□□□ 1.97
SNRPA-204ENST00000598452 ITSN1Q15811 1721 aa27.33■■□□□ 1.96
SNRPA-204ENST00000598452 COL14A1Q05707 1796 aaKnown RBP27.32■■□□□ 1.96
SNRPA-204ENST00000598452 NBPF8Q3BBV2 869 aa27.32■■□□□ 1.96
SNRPA-204ENST00000598452 CRYBG1Q9Y4K1 1723 aa27.32■■□□□ 1.96
SNRPA-204ENST00000598452 POLR3AO14802 1390 aaPredicted RBP27.31■■□□□ 1.96
SNRPA-204ENST00000598452 PLEKHG3A1L390 1219 aa27.3■■□□□ 1.96
SNRPA-204ENST00000598452 CHRNA2Q15822 529 aa27.3■■□□□ 1.96
SNRPA-204ENST00000598452 KIAA0232Q92628 1395 aa27.3■■□□□ 1.96
SNRPA-204ENST00000598452 L3MBTL2Q969R5 705 aa27.29■■□□□ 1.96
SNRPA-204ENST00000598452 SPATA31A5Q5VU36 1347 aa27.28■■□□□ 1.96
SNRPA-204ENST00000598452 SPATA31A7Q8IWB4 1347 aa27.28■■□□□ 1.96
SNRPA-204ENST00000598452 CENPJQ9HC77 1338 aaPredicted RBP27.28■■□□□ 1.96
SNRPA-204ENST00000598452 ZC3H6P61129 1189 aaKnown RBP27.28■■□□□ 1.96
SNRPA-204ENST00000598452 SRPK2P78362 688 aaKnown RBP27.28■■□□□ 1.96
SNRPA-204ENST00000598452 SIN3AQ96ST3 1273 aa27.28■■□□□ 1.96
SNRPA-204ENST00000598452 TOPAZ1Q8N9V7 1692 aa27.27■■□□□ 1.96
SNRPA-204ENST00000598452 SF3B2Q13435 895 aaKnown RBP27.27■■□□□ 1.96
SNRPA-204ENST00000598452 CABP2Q9NPB3 220 aa27.27■■□□□ 1.96
SNRPA-204ENST00000598452 FAM182BQ5T319 152 aa27.23■■□□□ 1.95
SNRPA-204ENST00000598452 ABTB2Q8N961 1025 aa27.23■■□□□ 1.95
SNRPA-204ENST00000598452 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
SNRPA-204ENST00000598452 SRCAPQ6ZRS2 3230 aa27.23■■□□□ 1.95
SNRPA-204ENST00000598452 PHRF1Q9P1Y6 1649 aaKnown RBP27.22■■□□□ 1.95
SNRPA-204ENST00000598452 PPIP5K1Q6PFW1 1433 aa27.22■■□□□ 1.95
SNRPA-204ENST00000598452 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
SNRPA-204ENST00000598452 SPATA31A1Q5TZJ5 1347 aa27.19■■□□□ 1.94
SNRPA-204ENST00000598452 CABP1Q9NZU7 370 aa27.17■■□□□ 1.94
SNRPA-204ENST00000598452 USP35Q9P2H5 1018 aa27.16■■□□□ 1.94
SNRPA-204ENST00000598452 USP19O94966 1318 aa27.16■■□□□ 1.94
SNRPA-204ENST00000598452 QRICH2Q9H0J4 1663 aa27.15■■□□□ 1.94
SNRPA-204ENST00000598452 THSD7AQ9UPZ6 1657 aa27.15■■□□□ 1.94
SNRPA-204ENST00000598452 NRKQ7Z2Y5 1582 aa27.14■■□□□ 1.94
SNRPA-204ENST00000598452 BAG6P46379 1132 aa27.14■■□□□ 1.94
SNRPA-204ENST00000598452 EVA1CP58658 441 aa27.14■■□□□ 1.94
SNRPA-204ENST00000598452 NLRP13Q86W25 1043 aa27.14■■□□□ 1.94
SNRPA-204ENST00000598452 GCP02774 474 aa27.12■■□□□ 1.93
SNRPA-204ENST00000598452 CAMTA1Q9Y6Y1 1673 aa27.11■■□□□ 1.93
SNRPA-204ENST00000598452 CPDO75976 1380 aa27.11■■□□□ 1.93
SNRPA-204ENST00000598452 SSH2Q76I76 1423 aa27.11■■□□□ 1.93
SNRPA-204ENST00000598452 LARP1Q6PKG0 1096 aaKnown RBP27.11■■□□□ 1.93
SNRPA-204ENST00000598452 ROCK2O75116 1388 aaKnown RBP27.1■■□□□ 1.93
SNRPA-204ENST00000598452 TRPM1Q7Z4N2 1603 aa27.1■■□□□ 1.93
SNRPA-204ENST00000598452 EN1Q05925 392 aaPredicted RBP27.1■■□□□ 1.93
SNRPA-204ENST00000598452 USP6P35125 1406 aa27.09■■□□□ 1.93
SNRPA-204ENST00000598452 EVC2Q86UK5 1308 aa27.09■■□□□ 1.93
SNRPA-204ENST00000598452 ZBTB7CA1YPR0 619 aa27.07■■□□□ 1.92
SNRPA-204ENST00000598452 NLRP6P59044 892 aa27.07■■□□□ 1.92
SNRPA-204ENST00000598452 BRD4O60885 1362 aaPredicted RBP27.06■■□□□ 1.92
SNRPA-204ENST00000598452 PSDA5PKW4 1024 aaPredicted RBP27.05■■□□□ 1.92
SNRPA-204ENST00000598452 BARGINQ6ZT62 677 aa27.05■■□□□ 1.92
SNRPA-204ENST00000598452 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
SNRPA-204ENST00000598452 TRIM37O94972 964 aa27.04■■□□□ 1.92
SNRPA-204ENST00000598452 TCP11L2Q8N4U5 519 aa27.04■■□□□ 1.92
SNRPA-204ENST00000598452 FAM196AQ6ZSG2 479 aa27.03■■□□□ 1.92
SNRPA-204ENST00000598452 RGPD1P0DJD0 1748 aa27.02■■□□□ 1.92
SNRPA-204ENST00000598452 PDE3BQ13370 1112 aa27.01■■□□□ 1.91
SNRPA-204ENST00000598452 COL5A2P05997 1499 aaPredicted RBP27■■□□□ 1.91
SNRPA-204ENST00000598452 EZH2Q15910 746 aaKnown RBP26.99■■□□□ 1.91
SNRPA-204ENST00000598452 SLIT3O75094 1523 aa26.98■■□□□ 1.91
SNRPA-204ENST00000598452 DISP2A7MBM2 1401 aa26.98■■□□□ 1.91
SNRPA-204ENST00000598452 TTC21BQ7Z4L5 1316 aa26.97■■□□□ 1.91
SNRPA-204ENST00000598452 TNS1Q9HBL0 1735 aaKnown RBP26.97■■□□□ 1.91
SNRPA-204ENST00000598452 THRAP3Q9Y2W1 955 aaKnown RBP26.96■■□□□ 1.91
SNRPA-204ENST00000598452 AATKQ6ZMQ8 1374 aa26.96■■□□□ 1.91
SNRPA-204ENST00000598452 PIK3C2AO00443 1686 aa26.95■■□□□ 1.91
SNRPA-204ENST00000598452 APBA3O96018 575 aa26.95■■□□□ 1.9
SNRPA-204ENST00000598452 CAMKK2Q96RR4 588 aa26.95■■□□□ 1.9
SNRPA-204ENST00000598452 ZNF692Q9BU19 519 aaPredicted RBP26.95■■□□□ 1.9
SNRPA-204ENST00000598452 CRB1P82279 1406 aa26.94■■□□□ 1.9
SNRPA-204ENST00000598452 SOX12O15370 315 aa26.93■■□□□ 1.9
SNRPA-204ENST00000598452 R3HDM1Q15032 1099 aaKnown RBP26.93■■□□□ 1.9
SNRPA-204ENST00000598452 AXIN2Q9Y2T1 843 aa26.93■■□□□ 1.9
SNRPA-204ENST00000598452 CARD11Q9BXL7 1154 aa26.92■■□□□ 1.9
SNRPA-204ENST00000598452 CPSF1Q10570 1443 aaKnown RBP26.91■■□□□ 1.9
SNRPA-204ENST00000598452 TOM1L2Q6ZVM7 507 aa26.9■■□□□ 1.9
SNRPA-204ENST00000598452 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
SNRPA-204ENST00000598452 ARHGEF25Q86VW2 580 aa26.89■■□□□ 1.9
SNRPA-204ENST00000598452 TTC21AQ8NDW8 1320 aa26.89■■□□□ 1.89
SNRPA-204ENST00000598452 AKAP12Q02952 1782 aa26.87■■□□□ 1.89
SNRPA-204ENST00000598452 KCNH5Q8NCM2 988 aa26.87■■□□□ 1.89
SNRPA-204ENST00000598452 COL18A1P39060 1754 aa26.86■■□□□ 1.89
SNRPA-204ENST00000598452 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
SNRPA-204ENST00000598452 SBNO2Q9Y2G9 1366 aa26.86■■□□□ 1.89
SNRPA-204ENST00000598452 LRP5O75197 1615 aa26.86■■□□□ 1.89
SNRPA-204ENST00000598452 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.85■■□□□ 1.89
SNRPA-204ENST00000598452 WDR17Q8IZU2 1322 aa26.85■■□□□ 1.89
SNRPA-204ENST00000598452 PARP4Q9UKK3 1724 aaKnown RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms