RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 VPS72Q15906 364 aa12.76□□□□□ -0.37
ARHGEF1-215ENST00000598444 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
ARHGEF1-215ENST00000598444 TOPAZ1Q8N9V7 1692 aa12.76□□□□□ -0.37
ARHGEF1-215ENST00000598444 QRICH2Q9H0J4 1663 aa12.76□□□□□ -0.37
ARHGEF1-215ENST00000598444 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
ARHGEF1-215ENST00000598444 ACEP12821 1306 aa12.75□□□□□ -0.37
ARHGEF1-215ENST00000598444 COL14A1Q05707 1796 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-215ENST00000598444 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
ARHGEF1-215ENST00000598444 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF1-215ENST00000598444 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
ARHGEF1-215ENST00000598444 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-215ENST00000598444 BTG4Q9NY30 223 aa12.74□□□□□ -0.37
ARHGEF1-215ENST00000598444 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
ARHGEF1-215ENST00000598444 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
ARHGEF1-215ENST00000598444 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
ARHGEF1-215ENST00000598444 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
ARHGEF1-215ENST00000598444 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
ARHGEF1-215ENST00000598444 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-215ENST00000598444 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
ARHGEF1-215ENST00000598444 POLR3AO14802 1390 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF1-215ENST00000598444 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-215ENST00000598444 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
ARHGEF1-215ENST00000598444 A0A0G2JS52 829 aa12.7□□□□□ -0.38
ARHGEF1-215ENST00000598444 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
ARHGEF1-215ENST00000598444 MYT1Q01538 1121 aa12.7□□□□□ -0.38
ARHGEF1-215ENST00000598444 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
ARHGEF1-215ENST00000598444 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
ARHGEF1-215ENST00000598444 CHRNA2Q15822 529 aa12.69□□□□□ -0.38
ARHGEF1-215ENST00000598444 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
ARHGEF1-215ENST00000598444 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
ARHGEF1-215ENST00000598444 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
ARHGEF1-215ENST00000598444 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
ARHGEF1-215ENST00000598444 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
ARHGEF1-215ENST00000598444 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
ARHGEF1-215ENST00000598444 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
ARHGEF1-215ENST00000598444 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
ARHGEF1-215ENST00000598444 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
ARHGEF1-215ENST00000598444 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
ARHGEF1-215ENST00000598444 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
ARHGEF1-215ENST00000598444 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF1-215ENST00000598444 EVA1CP58658 441 aa12.65□□□□□ -0.38
ARHGEF1-215ENST00000598444 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
ARHGEF1-215ENST00000598444 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
ARHGEF1-215ENST00000598444 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF1-215ENST00000598444 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
ARHGEF1-215ENST00000598444 GCP02774 474 aa12.63□□□□□ -0.39
ARHGEF1-215ENST00000598444 NLRP6P59044 892 aa12.63□□□□□ -0.39
ARHGEF1-215ENST00000598444 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
ARHGEF1-215ENST00000598444 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
ARHGEF1-215ENST00000598444 USP19O94966 1318 aa12.62□□□□□ -0.39
ARHGEF1-215ENST00000598444 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
ARHGEF1-215ENST00000598444 USP6P35125 1406 aa12.62□□□□□ -0.39
ARHGEF1-215ENST00000598444 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF1-215ENST00000598444 FAM182BQ5T319 152 aa12.62□□□□□ -0.39
ARHGEF1-215ENST00000598444 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
ARHGEF1-215ENST00000598444 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 ZBTB7CA1YPR0 619 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
ARHGEF1-215ENST00000598444 RGPD1P0DJD0 1748 aa12.6□□□□□ -0.39
ARHGEF1-215ENST00000598444 CPDO75976 1380 aa12.6□□□□□ -0.39
ARHGEF1-215ENST00000598444 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
ARHGEF1-215ENST00000598444 PIK3C2AO00443 1686 aa12.6□□□□□ -0.39
ARHGEF1-215ENST00000598444 SSH2Q76I76 1423 aa12.59□□□□□ -0.39
ARHGEF1-215ENST00000598444 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
ARHGEF1-215ENST00000598444 BAG6P46379 1132 aa12.58□□□□□ -0.4
ARHGEF1-215ENST00000598444 COL18A1P39060 1754 aa12.57□□□□□ -0.4
ARHGEF1-215ENST00000598444 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
ARHGEF1-215ENST00000598444 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
ARHGEF1-215ENST00000598444 MON2Q7Z3U7 1717 aa12.57□□□□□ -0.4
ARHGEF1-215ENST00000598444 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-215ENST00000598444 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
ARHGEF1-215ENST00000598444 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
ARHGEF1-215ENST00000598444 SLIT3O75094 1523 aa12.56□□□□□ -0.4
ARHGEF1-215ENST00000598444 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
ARHGEF1-215ENST00000598444 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
ARHGEF1-215ENST00000598444 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 CPSF1Q10570 1443 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 COL5A2P05997 1499 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
ARHGEF1-215ENST00000598444 SOX12O15370 315 aa12.54□□□□□ -0.4
ARHGEF1-215ENST00000598444 TRIM37O94972 964 aa12.54□□□□□ -0.4
ARHGEF1-215ENST00000598444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARHGEF1-215ENST00000598444 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
ARHGEF1-215ENST00000598444 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-215ENST00000598444 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
ARHGEF1-215ENST00000598444 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
ARHGEF1-215ENST00000598444 SLC12A5Q9H2X9 1139 aa12.53□□□□□ -0.4
ARHGEF1-215ENST00000598444 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
ARHGEF1-215ENST00000598444 CRB1P82279 1406 aa12.53□□□□□ -0.4
ARHGEF1-215ENST00000598444 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF1-215ENST00000598444 SBF2Q86WG5 1849 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms