RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 BTG4Q9NY30 223 aa24.81■■□□□ 1.56
PNKP-210ENST00000597965 ITSN1Q15811 1721 aa24.8■■□□□ 1.56
PNKP-210ENST00000597965 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
PNKP-210ENST00000597965 PRR36Q9H6K5 1346 aa24.79■■□□□ 1.56
PNKP-210ENST00000597965 NRAPQ86VF7 1730 aa24.77■■□□□ 1.56
PNKP-210ENST00000597965 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
PNKP-210ENST00000597965 FAM98CQ17RN3 349 aaKnown RBP24.75■■□□□ 1.55
PNKP-210ENST00000597965 NUDT16Q96DE0 195 aaKnown RBP24.75■■□□□ 1.55
PNKP-210ENST00000597965 PRDM11Q9NQV5 511 aa24.75■■□□□ 1.55
PNKP-210ENST00000597965 BAG6P46379 1132 aa24.74■■□□□ 1.55
PNKP-210ENST00000597965 DEFB132Q7Z7B7 95 aa24.74■■□□□ 1.55
PNKP-210ENST00000597965 ATP7BP35670 1465 aa24.72■■□□□ 1.55
PNKP-210ENST00000597965 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
PNKP-210ENST00000597965 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
PNKP-210ENST00000597965 KIAA1210Q9ULL0 1709 aa24.69■■□□□ 1.54
PNKP-210ENST00000597965 CRYBG1Q9Y4K1 1723 aa24.69■■□□□ 1.54
PNKP-210ENST00000597965 CDK19Q9BWU1 502 aa24.69■■□□□ 1.54
PNKP-210ENST00000597965 CCDC61Q9Y6R9 512 aa24.69■■□□□ 1.54
PNKP-210ENST00000597965 POLR3AO14802 1390 aaPredicted RBP24.66■■□□□ 1.54
PNKP-210ENST00000597965 KIAA0232Q92628 1395 aa24.65■■□□□ 1.54
PNKP-210ENST00000597965 RGPD1P0DJD0 1748 aa24.64■■□□□ 1.54
PNKP-210ENST00000597965 ACEP12821 1306 aa24.63■■□□□ 1.53
PNKP-210ENST00000597965 PLEKHG3A1L390 1219 aa24.63■■□□□ 1.53
PNKP-210ENST00000597965 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
PNKP-210ENST00000597965 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
PNKP-210ENST00000597965 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
PNKP-210ENST00000597965 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
PNKP-210ENST00000597965 TOPAZ1Q8N9V7 1692 aa24.61■■□□□ 1.53
PNKP-210ENST00000597965 EVA1CP58658 441 aa24.6■■□□□ 1.53
PNKP-210ENST00000597965 ABTB2Q8N961 1025 aa24.6■■□□□ 1.53
PNKP-210ENST00000597965 FAM196AQ6ZSG2 479 aa24.59■■□□□ 1.53
PNKP-210ENST00000597965 STRN4Q9NRL3 753 aa24.59■■□□□ 1.53
PNKP-210ENST00000597965 LRP5O75197 1615 aa24.59■■□□□ 1.53
PNKP-210ENST00000597965 BRD4O60885 1362 aaPredicted RBP24.58■■□□□ 1.53
PNKP-210ENST00000597965 ZC3H6P61129 1189 aaKnown RBP24.58■■□□□ 1.53
PNKP-210ENST00000597965 CHRNA2Q15822 529 aa24.58■■□□□ 1.53
PNKP-210ENST00000597965 DISP2A7MBM2 1401 aa24.58■■□□□ 1.53
PNKP-210ENST00000597965 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
PNKP-210ENST00000597965 EN1Q05925 392 aaPredicted RBP24.56■■□□□ 1.52
PNKP-210ENST00000597965 NUTM2GQ5VZR2 741 aa24.56■■□□□ 1.52
PNKP-210ENST00000597965 NLRP13Q86W25 1043 aa24.56■■□□□ 1.52
PNKP-210ENST00000597965 CENPJQ9HC77 1338 aaPredicted RBP24.56■■□□□ 1.52
PNKP-210ENST00000597965 CPDO75976 1380 aa24.55■■□□□ 1.52
PNKP-210ENST00000597965 BARGINQ6ZT62 677 aa24.55■■□□□ 1.52
PNKP-210ENST00000597965 SSH2Q76I76 1423 aa24.53■■□□□ 1.52
PNKP-210ENST00000597965 PDE3BQ13370 1112 aa24.53■■□□□ 1.52
PNKP-210ENST00000597965 NBPF1Q3BBV0 1214 aa24.53■■□□□ 1.52
PNKP-210ENST00000597965 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
PNKP-210ENST00000597965 PPIP5K1Q6PFW1 1433 aa24.52■■□□□ 1.52
PNKP-210ENST00000597965 THRAP3Q9Y2W1 955 aaKnown RBP24.52■■□□□ 1.52
PNKP-210ENST00000597965 USP19O94966 1318 aa24.52■■□□□ 1.52
PNKP-210ENST00000597965 PARD3Q8TEW0 1356 aa24.52■■□□□ 1.52
PNKP-210ENST00000597965 NRKQ7Z2Y5 1582 aa24.51■■□□□ 1.51
PNKP-210ENST00000597965 PSDA5PKW4 1024 aaPredicted RBP24.51■■□□□ 1.51
PNKP-210ENST00000597965 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
PNKP-210ENST00000597965 C11orf95C9JLR9 678 aaPredicted RBP24.5■■□□□ 1.51
PNKP-210ENST00000597965 TCP11L2Q8N4U5 519 aa24.5■■□□□ 1.51
PNKP-210ENST00000597965 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
PNKP-210ENST00000597965 GCP02774 474 aa24.49■■□□□ 1.51
PNKP-210ENST00000597965 TRIM37O94972 964 aa24.48■■□□□ 1.51
PNKP-210ENST00000597965 CABP2Q9NPB3 220 aa24.47■■□□□ 1.51
PNKP-210ENST00000597965 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
PNKP-210ENST00000597965 LARP1Q6PKG0 1096 aaKnown RBP24.46■■□□□ 1.51
PNKP-210ENST00000597965 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
PNKP-210ENST00000597965 QRICH2Q9H0J4 1663 aa24.46■■□□□ 1.51
PNKP-210ENST00000597965 APBA3O96018 575 aa24.45■■□□□ 1.5
PNKP-210ENST00000597965 EZH2Q15910 746 aaKnown RBP24.45■■□□□ 1.5
PNKP-210ENST00000597965 R3HDM1Q15032 1099 aaKnown RBP24.44■■□□□ 1.5
PNKP-210ENST00000597965 CAMKK2Q96RR4 588 aa24.44■■□□□ 1.5
PNKP-210ENST00000597965 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
PNKP-210ENST00000597965 USP6P35125 1406 aa24.43■■□□□ 1.5
PNKP-210ENST00000597965 NLRP6P59044 892 aa24.42■■□□□ 1.5
PNKP-210ENST00000597965 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
PNKP-210ENST00000597965 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
PNKP-210ENST00000597965 NBPF14Q5TI25 921 aa24.4■■□□□ 1.5
PNKP-210ENST00000597965 ZNF692Q9BU19 519 aaPredicted RBP24.4■■□□□ 1.5
PNKP-210ENST00000597965 CRB1P82279 1406 aa24.4■■□□□ 1.5
PNKP-210ENST00000597965 L3MBTL2Q969R5 705 aa24.39■■□□□ 1.49
PNKP-210ENST00000597965 AATKQ6ZMQ8 1374 aa24.39■■□□□ 1.49
PNKP-210ENST00000597965 PARP4Q9UKK3 1724 aaKnown RBP24.38■■□□□ 1.49
PNKP-210ENST00000597965 SLIT3O75094 1523 aa24.35■■□□□ 1.49
PNKP-210ENST00000597965 KCNH5Q8NCM2 988 aa24.35■■□□□ 1.49
PNKP-210ENST00000597965 ROCK2O75116 1388 aaKnown RBP24.34■■□□□ 1.49
PNKP-210ENST00000597965 ZBTB7CA1YPR0 619 aa24.34■■□□□ 1.49
PNKP-210ENST00000597965 OVOS2A0A0G2JMS6 1433 aa24.34■■□□□ 1.49
PNKP-210ENST00000597965 OVOS2A0A0J9YW53 1432 aa24.34■■□□□ 1.49
PNKP-210ENST00000597965 OVOS2Q6IE36 1432 aa24.34■■□□□ 1.49
PNKP-210ENST00000597965 TRPM1Q7Z4N2 1603 aa24.33■■□□□ 1.49
PNKP-210ENST00000597965 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
PNKP-210ENST00000597965 CDCA7Q9BWT1 371 aaPredicted RBP24.33■■□□□ 1.49
PNKP-210ENST00000597965 RREB1Q92766 1687 aa24.33■■□□□ 1.49
PNKP-210ENST00000597965 TTC21AQ8NDW8 1320 aa24.32■■□□□ 1.48
PNKP-210ENST00000597965 DDB1Q16531 1140 aa24.31■■□□□ 1.48
PNKP-210ENST00000597965 PIK3C2AO00443 1686 aa24.3■■□□□ 1.48
PNKP-210ENST00000597965 WDR17Q8IZU2 1322 aa24.29■■□□□ 1.48
PNKP-210ENST00000597965 NUP188Q5SRE5 1749 aa24.28■■□□□ 1.48
PNKP-210ENST00000597965 TTC21BQ7Z4L5 1316 aa24.28■■□□□ 1.48
PNKP-210ENST00000597965 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
PNKP-210ENST00000597965 PLSCR1O15162 318 aa24.26■■□□□ 1.47
PNKP-210ENST00000597965 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms