RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 GLI3P10071 1580 aa21.99■■□□□ 1.11
XRCC1-206ENST00000597811 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
XRCC1-206ENST00000597811 UNC5CLQ8IV45 518 aa21.98■■□□□ 1.11
XRCC1-206ENST00000597811 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
XRCC1-206ENST00000597811 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
XRCC1-206ENST00000597811 PAK3O75914 559 aaPredicted RBP21.96■■□□□ 1.11
XRCC1-206ENST00000597811 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
XRCC1-206ENST00000597811 GJD4Q96KN9 370 aaPredicted RBP21.96■■□□□ 1.11
XRCC1-206ENST00000597811 CCDC61Q9Y6R9 512 aa21.96■■□□□ 1.11
XRCC1-206ENST00000597811 POLR3AO14802 1390 aaPredicted RBP21.96■■□□□ 1.11
XRCC1-206ENST00000597811 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.1
XRCC1-206ENST00000597811 RALGAPBQ86X10 1494 aa21.95■■□□□ 1.1
XRCC1-206ENST00000597811 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
XRCC1-206ENST00000597811 ACEP12821 1306 aa21.94■■□□□ 1.1
XRCC1-206ENST00000597811 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
XRCC1-206ENST00000597811 PLEKHG3A1L390 1219 aa21.93■■□□□ 1.1
XRCC1-206ENST00000597811 SRPK2P78362 688 aaKnown RBP21.93■■□□□ 1.1
XRCC1-206ENST00000597811 PPIP5K1Q6PFW1 1433 aa21.92■■□□□ 1.1
XRCC1-206ENST00000597811 FAM83GA6ND36 823 aa21.92■■□□□ 1.1
XRCC1-206ENST00000597811 CABP2Q9NPB3 220 aa21.92■■□□□ 1.1
XRCC1-206ENST00000597811 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
XRCC1-206ENST00000597811 ATAD2Q6PL18 1390 aa21.89■■□□□ 1.1
XRCC1-206ENST00000597811 VPS72Q15906 364 aa21.88■■□□□ 1.09
XRCC1-206ENST00000597811 NUTM2GQ5VZR2 741 aa21.86■■□□□ 1.09
XRCC1-206ENST00000597811 BTG4Q9NY30 223 aa21.85■■□□□ 1.09
XRCC1-206ENST00000597811 TIMELESSQ9UNS1 1208 aa21.85■■□□□ 1.09
XRCC1-206ENST00000597811 NRKQ7Z2Y5 1582 aa21.85■■□□□ 1.09
XRCC1-206ENST00000597811 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
XRCC1-206ENST00000597811 AKAP12Q02952 1782 aa21.84■■□□□ 1.09
XRCC1-206ENST00000597811 CABP1Q9NZU7 370 aa21.83■■□□□ 1.09
XRCC1-206ENST00000597811 CCDC9Q9Y3X0 531 aaKnown RBP21.83■■□□□ 1.09
XRCC1-206ENST00000597811 PRDM11Q9NQV5 511 aa21.82■■□□□ 1.08
XRCC1-206ENST00000597811 KIAA0232Q92628 1395 aa21.82■■□□□ 1.08
XRCC1-206ENST00000597811 ABTB2Q8N961 1025 aa21.81■■□□□ 1.08
XRCC1-206ENST00000597811 USP6P35125 1406 aa21.8■■□□□ 1.08
XRCC1-206ENST00000597811 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
XRCC1-206ENST00000597811 ONECUT3O60422 494 aaPredicted RBP21.79■■□□□ 1.08
XRCC1-206ENST00000597811 SEPT12Q8IYM1 358 aa21.79■■□□□ 1.08
XRCC1-206ENST00000597811 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
XRCC1-206ENST00000597811 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
XRCC1-206ENST00000597811 CHRNA2Q15822 529 aa21.78■■□□□ 1.08
XRCC1-206ENST00000597811 USP19O94966 1318 aa21.78■■□□□ 1.08
XRCC1-206ENST00000597811 SBNO2Q9Y2G9 1366 aa21.77■■□□□ 1.08
XRCC1-206ENST00000597811 LMO7Q8WWI1 1683 aa21.77■■□□□ 1.08
XRCC1-206ENST00000597811 SSH2Q76I76 1423 aa21.77■■□□□ 1.08
XRCC1-206ENST00000597811 FAM98CQ17RN3 349 aaKnown RBP21.75■■□□□ 1.07
XRCC1-206ENST00000597811 THSD7AQ9UPZ6 1657 aa21.75■■□□□ 1.07
XRCC1-206ENST00000597811 SPATA31A5Q5VU36 1347 aa21.75■■□□□ 1.07
XRCC1-206ENST00000597811 SPATA31A7Q8IWB4 1347 aa21.75■■□□□ 1.07
XRCC1-206ENST00000597811 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
XRCC1-206ENST00000597811 NLRP13Q86W25 1043 aa21.74■■□□□ 1.07
XRCC1-206ENST00000597811 CPDO75976 1380 aa21.74■■□□□ 1.07
XRCC1-206ENST00000597811 CAMTA1Q9Y6Y1 1673 aa21.73■■□□□ 1.07
XRCC1-206ENST00000597811 SLIT3O75094 1523 aa21.73■■□□□ 1.07
XRCC1-206ENST00000597811 A0A0G2JS52 829 aa21.71■■□□□ 1.07
XRCC1-206ENST00000597811 GCP02774 474 aa21.71■■□□□ 1.07
XRCC1-206ENST00000597811 MYT1Q01538 1121 aa21.71■■□□□ 1.07
XRCC1-206ENST00000597811 CPSF1Q10570 1443 aaKnown RBP21.71■■□□□ 1.07
XRCC1-206ENST00000597811 KRT27Q7Z3Y8 459 aa21.7■■□□□ 1.06
XRCC1-206ENST00000597811 STRN4Q9NRL3 753 aa21.7■■□□□ 1.06
XRCC1-206ENST00000597811 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
XRCC1-206ENST00000597811 NLRP6P59044 892 aa21.69■■□□□ 1.06
XRCC1-206ENST00000597811 CCDC125Q86Z20 511 aa21.69■■□□□ 1.06
XRCC1-206ENST00000597811 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
XRCC1-206ENST00000597811 ZNF692Q9BU19 519 aaPredicted RBP21.68■■□□□ 1.06
XRCC1-206ENST00000597811 TTC21BQ7Z4L5 1316 aa21.68■■□□□ 1.06
XRCC1-206ENST00000597811 BLMP54132 1417 aaPredicted RBP21.68■■□□□ 1.06
XRCC1-206ENST00000597811 COL18A1P39060 1754 aa21.68■■□□□ 1.06
XRCC1-206ENST00000597811 SRCAPQ6ZRS2 3230 aa21.68■■□□□ 1.06
XRCC1-206ENST00000597811 CD163L1Q9NR16 1453 aa21.66■■□□□ 1.06
XRCC1-206ENST00000597811 KTN1Q86UP2 1357 aaKnown RBP21.66■■□□□ 1.06
XRCC1-206ENST00000597811 USP47Q96K76 1375 aa21.66■■□□□ 1.06
XRCC1-206ENST00000597811 RGPD5Q99666 1765 aa21.66■■□□□ 1.06
XRCC1-206ENST00000597811 COL5A2P05997 1499 aaPredicted RBP21.64■■□□□ 1.06
XRCC1-206ENST00000597811 USP54Q70EL1 1684 aa21.64■■□□□ 1.05
XRCC1-206ENST00000597811 EVA1CP58658 441 aa21.64■■□□□ 1.05
XRCC1-206ENST00000597811 TTC21AQ8NDW8 1320 aa21.63■■□□□ 1.05
XRCC1-206ENST00000597811 LARP1Q6PKG0 1096 aaKnown RBP21.63■■□□□ 1.05
XRCC1-206ENST00000597811 USP35Q9P2H5 1018 aa21.63■■□□□ 1.05
XRCC1-206ENST00000597811 ZBTB7CA1YPR0 619 aa21.62■■□□□ 1.05
XRCC1-206ENST00000597811 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
XRCC1-206ENST00000597811 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
XRCC1-206ENST00000597811 RGPD1P0DJD0 1748 aa21.62■■□□□ 1.05
XRCC1-206ENST00000597811 FAM182BQ5T319 152 aa21.61■■□□□ 1.05
XRCC1-206ENST00000597811 TESK2Q96S53 571 aa21.61■■□□□ 1.05
XRCC1-206ENST00000597811 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
XRCC1-206ENST00000597811 NFAT5O94916 1531 aa21.6■■□□□ 1.05
XRCC1-206ENST00000597811 DEFB132Q7Z7B7 95 aa21.6■■□□□ 1.05
XRCC1-206ENST00000597811 SLC12A5Q9H2X9 1139 aa21.6■■□□□ 1.05
XRCC1-206ENST00000597811 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
XRCC1-206ENST00000597811 PARP4Q9UKK3 1724 aaKnown RBP21.59■■□□□ 1.05
XRCC1-206ENST00000597811 WNK3Q9BYP7 1800 aa21.59■■□□□ 1.05
XRCC1-206ENST00000597811 TMF1P82094 1093 aa21.58■■□□□ 1.05
XRCC1-206ENST00000597811 BARGINQ6ZT62 677 aa21.58■■□□□ 1.05
XRCC1-206ENST00000597811 LTN1O94822 1766 aa21.58■■□□□ 1.04
XRCC1-206ENST00000597811 SOX12O15370 315 aa21.57■■□□□ 1.04
XRCC1-206ENST00000597811 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
XRCC1-206ENST00000597811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.57■■□□□ 1.04
XRCC1-206ENST00000597811 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
XRCC1-206ENST00000597811 A0A1W2PP64 1363 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms