RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 BTG4Q9NY30 223 aa15.33■□□□□ 0.04
LSM4-205ENST00000597776 ITSN1Q15811 1721 aa15.33■□□□□ 0.04
LSM4-205ENST00000597776 COL14A1Q05707 1796 aaKnown RBP15.32■□□□□ 0.04
LSM4-205ENST00000597776 A0A0G2JS52 829 aa15.32■□□□□ 0.04
LSM4-205ENST00000597776 MYT1Q01538 1121 aa15.32■□□□□ 0.04
LSM4-205ENST00000597776 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
LSM4-205ENST00000597776 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
LSM4-205ENST00000597776 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
LSM4-205ENST00000597776 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
LSM4-205ENST00000597776 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
LSM4-205ENST00000597776 KIAA1210Q9ULL0 1709 aa15.31■□□□□ 0.04
LSM4-205ENST00000597776 KRT27Q7Z3Y8 459 aa15.3■□□□□ 0.04
LSM4-205ENST00000597776 DEFB132Q7Z7B7 95 aa15.3■□□□□ 0.04
LSM4-205ENST00000597776 TOPAZ1Q8N9V7 1692 aa15.3■□□□□ 0.04
LSM4-205ENST00000597776 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
LSM4-205ENST00000597776 PRDM11Q9NQV5 511 aa15.29■□□□□ 0.04
LSM4-205ENST00000597776 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
LSM4-205ENST00000597776 POLR3AO14802 1390 aaPredicted RBP15.27■□□□□ 0.04
LSM4-205ENST00000597776 KIAA0232Q92628 1395 aa15.27■□□□□ 0.04
LSM4-205ENST00000597776 ACEP12821 1306 aa15.27■□□□□ 0.04
LSM4-205ENST00000597776 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
LSM4-205ENST00000597776 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
LSM4-205ENST00000597776 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
LSM4-205ENST00000597776 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
LSM4-205ENST00000597776 NBPF8Q3BBV2 869 aa15.26■□□□□ 0.03
LSM4-205ENST00000597776 CCDC61Q9Y6R9 512 aa15.26■□□□□ 0.03
LSM4-205ENST00000597776 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
LSM4-205ENST00000597776 FAM182BQ5T319 152 aa15.25■□□□□ 0.03
LSM4-205ENST00000597776 PLEKHG3A1L390 1219 aa15.24■□□□□ 0.03
LSM4-205ENST00000597776 THSD7AQ9UPZ6 1657 aa15.24■□□□□ 0.03
LSM4-205ENST00000597776 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
LSM4-205ENST00000597776 SRPK2P78362 688 aaKnown RBP15.23■□□□□ 0.03
LSM4-205ENST00000597776 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
LSM4-205ENST00000597776 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
LSM4-205ENST00000597776 QRICH2Q9H0J4 1663 aa15.22■□□□□ 0.03
LSM4-205ENST00000597776 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
LSM4-205ENST00000597776 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
LSM4-205ENST00000597776 SPATA31A1Q5TZJ5 1347 aa15.21■□□□□ 0.03
LSM4-205ENST00000597776 ABTB2Q8N961 1025 aa15.21■□□□□ 0.03
LSM4-205ENST00000597776 L3MBTL2Q969R5 705 aa15.21■□□□□ 0.03
LSM4-205ENST00000597776 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
LSM4-205ENST00000597776 USP19O94966 1318 aa15.19■□□□□ 0.02
LSM4-205ENST00000597776 BAG6P46379 1132 aa15.19■□□□□ 0.02
LSM4-205ENST00000597776 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
LSM4-205ENST00000597776 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
LSM4-205ENST00000597776 CAMTA1Q9Y6Y1 1673 aa15.18■□□□□ 0.02
LSM4-205ENST00000597776 RGPD1P0DJD0 1748 aa15.17■□□□□ 0.02
LSM4-205ENST00000597776 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
LSM4-205ENST00000597776 EVA1CP58658 441 aa15.17■□□□□ 0.02
LSM4-205ENST00000597776 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
LSM4-205ENST00000597776 TRPM1Q7Z4N2 1603 aa15.17■□□□□ 0.02
LSM4-205ENST00000597776 CPDO75976 1380 aa15.16■□□□□ 0.02
LSM4-205ENST00000597776 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
LSM4-205ENST00000597776 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
LSM4-205ENST00000597776 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
LSM4-205ENST00000597776 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
LSM4-205ENST00000597776 TNS1Q9HBL0 1735 aaKnown RBP15.16■□□□□ 0.02
LSM4-205ENST00000597776 USP6P35125 1406 aa15.16■□□□□ 0.02
LSM4-205ENST00000597776 GCP02774 474 aa15.15■□□□□ 0.02
LSM4-205ENST00000597776 NLRP13Q86W25 1043 aa15.15■□□□□ 0.02
LSM4-205ENST00000597776 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
LSM4-205ENST00000597776 ZBTB7CA1YPR0 619 aa15.13■□□□□ 0.01
LSM4-205ENST00000597776 TRIM37O94972 964 aa15.13■□□□□ 0.01
LSM4-205ENST00000597776 COL5A2P05997 1499 aaPredicted RBP15.13■□□□□ 0.01
LSM4-205ENST00000597776 DISP2A7MBM2 1401 aa15.12■□□□□ 0.01
LSM4-205ENST00000597776 NLRP6P59044 892 aa15.12■□□□□ 0.01
LSM4-205ENST00000597776 BARGINQ6ZT62 677 aa15.12■□□□□ 0.01
LSM4-205ENST00000597776 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
LSM4-205ENST00000597776 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
LSM4-205ENST00000597776 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
LSM4-205ENST00000597776 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
LSM4-205ENST00000597776 EZH2Q15910 746 aaKnown RBP15.11■□□□□ 0.01
LSM4-205ENST00000597776 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
LSM4-205ENST00000597776 SLIT3O75094 1523 aa15.11■□□□□ 0.01
LSM4-205ENST00000597776 LRP5O75197 1615 aa15.1■□□□□ 0.01
LSM4-205ENST00000597776 PDE3BQ13370 1112 aa15.1■□□□□ 0.01
LSM4-205ENST00000597776 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
LSM4-205ENST00000597776 APBA3O96018 575 aa15.08■□□□□ 0
LSM4-205ENST00000597776 AATKQ6ZMQ8 1374 aa15.08■□□□□ 0
LSM4-205ENST00000597776 CRB1P82279 1406 aa15.08■□□□□ 0
LSM4-205ENST00000597776 CAMKK2Q96RR4 588 aa15.07■□□□□ 0
LSM4-205ENST00000597776 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
LSM4-205ENST00000597776 PARP4Q9UKK3 1724 aaKnown RBP15.06■□□□□ 0
LSM4-205ENST00000597776 SOX12O15370 315 aa15.06■□□□□ 0
LSM4-205ENST00000597776 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
LSM4-205ENST00000597776 AKAP12Q02952 1782 aa15.06■□□□□ 0
LSM4-205ENST00000597776 AXIN2Q9Y2T1 843 aa15.05■□□□□ -0
LSM4-205ENST00000597776 CPSF1Q10570 1443 aaKnown RBP15.05■□□□□ -0
LSM4-205ENST00000597776 COL18A1P39060 1754 aa15.05■□□□□ -0
LSM4-205ENST00000597776 RREB1Q92766 1687 aa15.03■□□□□ -0
LSM4-205ENST00000597776 LRRC37A3O60309 1634 aa15.03■□□□□ -0
LSM4-205ENST00000597776 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
LSM4-205ENST00000597776 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
LSM4-205ENST00000597776 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
LSM4-205ENST00000597776 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
LSM4-205ENST00000597776 TTC21AQ8NDW8 1320 aa15.02■□□□□ -0
LSM4-205ENST00000597776 ARHGEF25Q86VW2 580 aa15.02■□□□□ -0
LSM4-205ENST00000597776 NUP188Q5SRE5 1749 aa15.02□□□□□ -0.01
LSM4-205ENST00000597776 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
LSM4-205ENST00000597776 NFAT5O94916 1531 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms