RNA–Protein interactions for RNA: ENST00000597705.5

C19orf48-209, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-209ENST00000597705 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
C19orf48-209ENST00000597705 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
C19orf48-209ENST00000597705 PPIP5K1Q6PFW1 1433 aa17.87■□□□□ 0.45
C19orf48-209ENST00000597705 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
C19orf48-209ENST00000597705 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
C19orf48-209ENST00000597705 ATAD2Q6PL18 1390 aa17.84■□□□□ 0.45
C19orf48-209ENST00000597705 UNC5CLQ8IV45 518 aa17.84■□□□□ 0.45
C19orf48-209ENST00000597705 ABTB2Q8N961 1025 aa17.84■□□□□ 0.45
C19orf48-209ENST00000597705 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
C19orf48-209ENST00000597705 MARF1Q9Y4F3 1742 aaKnown RBP17.84■□□□□ 0.45
C19orf48-209ENST00000597705 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.45
C19orf48-209ENST00000597705 NLRP13Q86W25 1043 aa17.82■□□□□ 0.44
C19orf48-209ENST00000597705 ALS2Q96Q42 1657 aa17.82■□□□□ 0.44
C19orf48-209ENST00000597705 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
C19orf48-209ENST00000597705 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
C19orf48-209ENST00000597705 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
C19orf48-209ENST00000597705 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
C19orf48-209ENST00000597705 GJD4Q96KN9 370 aaPredicted RBP17.8■□□□□ 0.44
C19orf48-209ENST00000597705 SLIT2O94813 1529 aa17.79■□□□□ 0.44
C19orf48-209ENST00000597705 ATRNO75882 1429 aa17.79■□□□□ 0.44
C19orf48-209ENST00000597705 VPS72Q15906 364 aa17.77■□□□□ 0.44
C19orf48-209ENST00000597705 USP6P35125 1406 aa17.77■□□□□ 0.44
C19orf48-209ENST00000597705 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
C19orf48-209ENST00000597705 PRDM11Q9NQV5 511 aa17.76■□□□□ 0.43
C19orf48-209ENST00000597705 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
C19orf48-209ENST00000597705 NLRP6P59044 892 aa17.75■□□□□ 0.43
C19orf48-209ENST00000597705 TMF1P82094 1093 aa17.75■□□□□ 0.43
C19orf48-209ENST00000597705 NUTM2GQ5VZR2 741 aa17.75■□□□□ 0.43
C19orf48-209ENST00000597705 HDGFL2Q7Z4V5 671 aaPredicted RBP17.75■□□□□ 0.43
C19orf48-209ENST00000597705 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
C19orf48-209ENST00000597705 TESK2Q96S53 571 aa17.75■□□□□ 0.43
C19orf48-209ENST00000597705 BTG4Q9NY30 223 aa17.75■□□□□ 0.43
C19orf48-209ENST00000597705 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
C19orf48-209ENST00000597705 GCP02774 474 aa17.74■□□□□ 0.43
C19orf48-209ENST00000597705 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.74■□□□□ 0.43
C19orf48-209ENST00000597705 NWD2Q9ULI1 1742 aa17.74■□□□□ 0.43
C19orf48-209ENST00000597705 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
C19orf48-209ENST00000597705 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
C19orf48-209ENST00000597705 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
C19orf48-209ENST00000597705 USP47Q96K76 1375 aa17.73■□□□□ 0.43
C19orf48-209ENST00000597705 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
C19orf48-209ENST00000597705 USP19O94966 1318 aa17.72■□□□□ 0.43
C19orf48-209ENST00000597705 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
C19orf48-209ENST00000597705 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
C19orf48-209ENST00000597705 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
C19orf48-209ENST00000597705 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
C19orf48-209ENST00000597705 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
C19orf48-209ENST00000597705 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
C19orf48-209ENST00000597705 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
C19orf48-209ENST00000597705 CPDO75976 1380 aa17.7■□□□□ 0.42
C19orf48-209ENST00000597705 KIAA0232Q92628 1395 aa17.7■□□□□ 0.42
C19orf48-209ENST00000597705 EVA1CP58658 441 aa17.7■□□□□ 0.42
C19orf48-209ENST00000597705 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
C19orf48-209ENST00000597705 RGS12O14924 1447 aa17.69■□□□□ 0.42
C19orf48-209ENST00000597705 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
C19orf48-209ENST00000597705 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
C19orf48-209ENST00000597705 UPF1Q92900 1129 aaKnown RBP eCLIP17.67■□□□□ 0.42not detected■■■■■ 38.3
C19orf48-209ENST00000597705 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
C19orf48-209ENST00000597705 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
C19orf48-209ENST00000597705 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
C19orf48-209ENST00000597705 CCDC125Q86Z20 511 aa17.65■□□□□ 0.42
C19orf48-209ENST00000597705 SPATA31A5Q5VU36 1347 aa17.65■□□□□ 0.42
C19orf48-209ENST00000597705 SPATA31A7Q8IWB4 1347 aa17.65■□□□□ 0.42
C19orf48-209ENST00000597705 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.42
C19orf48-209ENST00000597705 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
C19orf48-209ENST00000597705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.64■□□□□ 0.41
C19orf48-209ENST00000597705 SEPT12Q8IYM1 358 aa17.64■□□□□ 0.41
C19orf48-209ENST00000597705 USP31Q70CQ4 1352 aa17.63■□□□□ 0.41
C19orf48-209ENST00000597705 STRN4Q9NRL3 753 aa17.62■□□□□ 0.41
C19orf48-209ENST00000597705 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
C19orf48-209ENST00000597705 CD163L1Q9NR16 1453 aa17.62■□□□□ 0.41
C19orf48-209ENST00000597705 GLI3P10071 1580 aa17.62■□□□□ 0.41
C19orf48-209ENST00000597705 FAM98CQ17RN3 349 aaKnown RBP17.61■□□□□ 0.41
C19orf48-209ENST00000597705 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
C19orf48-209ENST00000597705 THRAP3Q9Y2W1 955 aaKnown RBP17.61■□□□□ 0.41
C19orf48-209ENST00000597705 SLIT3O75094 1523 aa17.61■□□□□ 0.41
C19orf48-209ENST00000597705 NRKQ7Z2Y5 1582 aa17.61■□□□□ 0.41
C19orf48-209ENST00000597705 MON2Q7Z3U7 1717 aa17.61■□□□□ 0.41
C19orf48-209ENST00000597705 A0A0G2JS52 829 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 MYT1Q01538 1121 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 NRAPQ86VF7 1730 aa17.6■□□□□ 0.41
C19orf48-209ENST00000597705 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
C19orf48-209ENST00000597705 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.4
C19orf48-209ENST00000597705 BARGINQ6ZT62 677 aa17.58■□□□□ 0.4
C19orf48-209ENST00000597705 NME9Q86XW9 330 aa17.58■□□□□ 0.4
C19orf48-209ENST00000597705 CAMTA1Q9Y6Y1 1673 aa17.58■□□□□ 0.4
C19orf48-209ENST00000597705 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
C19orf48-209ENST00000597705 LARP1Q6PKG0 1096 aaKnown RBP17.56■□□□□ 0.4
C19orf48-209ENST00000597705 COG3Q96JB2 828 aa17.56■□□□□ 0.4
C19orf48-209ENST00000597705 SOX12O15370 315 aa17.55■□□□□ 0.4
C19orf48-209ENST00000597705 LMO7Q8WWI1 1683 aa17.55■□□□□ 0.4
C19orf48-209ENST00000597705 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
C19orf48-209ENST00000597705 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
C19orf48-209ENST00000597705 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
C19orf48-209ENST00000597705 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
C19orf48-209ENST00000597705 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms