RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
ZNF548-206ENST00000597047 NHSL1Q5SYE7 1610 aa12.79□□□□□ -0.36
ZNF548-206ENST00000597047 NLRP6P59044 892 aa12.78□□□□□ -0.36
ZNF548-206ENST00000597047 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
ZNF548-206ENST00000597047 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
ZNF548-206ENST00000597047 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
ZNF548-206ENST00000597047 TTC21BQ7Z4L5 1316 aa12.78□□□□□ -0.36
ZNF548-206ENST00000597047 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
ZNF548-206ENST00000597047 MYOM1P52179 1685 aa12.77□□□□□ -0.36
ZNF548-206ENST00000597047 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
ZNF548-206ENST00000597047 NME9Q86XW9 330 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 USP6P35125 1406 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 PXDNQ92626 1479 aa12.77□□□□□ -0.37
ZNF548-206ENST00000597047 AHDC1Q5TGY3 1603 aaPredicted RBP12.77□□□□□ -0.37
ZNF548-206ENST00000597047 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
ZNF548-206ENST00000597047 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
ZNF548-206ENST00000597047 CD163L1Q9NR16 1453 aa12.76□□□□□ -0.37
ZNF548-206ENST00000597047 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-206ENST00000597047 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
ZNF548-206ENST00000597047 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
ZNF548-206ENST00000597047 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
ZNF548-206ENST00000597047 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
ZNF548-206ENST00000597047 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-206ENST00000597047 CC2D1BQ5T0F9 858 aaKnown RBP12.74□□□□□ -0.37
ZNF548-206ENST00000597047 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
ZNF548-206ENST00000597047 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
ZNF548-206ENST00000597047 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
ZNF548-206ENST00000597047 JCADQ9P266 1359 aa12.73□□□□□ -0.37
ZNF548-206ENST00000597047 COG3Q96JB2 828 aa12.73□□□□□ -0.37
ZNF548-206ENST00000597047 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
ZNF548-206ENST00000597047 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
ZNF548-206ENST00000597047 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
ZNF548-206ENST00000597047 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
ZNF548-206ENST00000597047 TRPM3Q9HCF6 1732 aaPredicted RBP12.72□□□□□ -0.37
ZNF548-206ENST00000597047 ZC3H6P61129 1189 aaKnown RBP12.72□□□□□ -0.37
ZNF548-206ENST00000597047 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.37
ZNF548-206ENST00000597047 FYB1O15117 783 aa12.71□□□□□ -0.37
ZNF548-206ENST00000597047 FBLN1P23142 703 aa12.7□□□□□ -0.38
ZNF548-206ENST00000597047 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
ZNF548-206ENST00000597047 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
ZNF548-206ENST00000597047 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
ZNF548-206ENST00000597047 PIK3C2AO00443 1686 aa12.68□□□□□ -0.38
ZNF548-206ENST00000597047 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
ZNF548-206ENST00000597047 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-206ENST00000597047 CHRNA2Q15822 529 aa12.68□□□□□ -0.38
ZNF548-206ENST00000597047 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
ZNF548-206ENST00000597047 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
ZNF548-206ENST00000597047 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
ZNF548-206ENST00000597047 GCP02774 474 aa12.67□□□□□ -0.38
ZNF548-206ENST00000597047 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
ZNF548-206ENST00000597047 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
ZNF548-206ENST00000597047 SPATA31A6Q5VVP1 1343 aa12.66□□□□□ -0.38
ZNF548-206ENST00000597047 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
ZNF548-206ENST00000597047 KCNH5Q8NCM2 988 aa12.66□□□□□ -0.38
ZNF548-206ENST00000597047 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
ZNF548-206ENST00000597047 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
ZNF548-206ENST00000597047 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-206ENST00000597047 AMPHP49418 695 aa12.64□□□□□ -0.39
ZNF548-206ENST00000597047 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-206ENST00000597047 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-206ENST00000597047 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
ZNF548-206ENST00000597047 EVA1CP58658 441 aa12.63□□□□□ -0.39
ZNF548-206ENST00000597047 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
ZNF548-206ENST00000597047 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
ZNF548-206ENST00000597047 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
ZNF548-206ENST00000597047 KIAA0232Q92628 1395 aa12.63□□□□□ -0.39
ZNF548-206ENST00000597047 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-206ENST00000597047 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
ZNF548-206ENST00000597047 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
ZNF548-206ENST00000597047 LRP6O75581 1613 aa12.62□□□□□ -0.39
ZNF548-206ENST00000597047 USP19O94966 1318 aa12.62□□□□□ -0.39
ZNF548-206ENST00000597047 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
ZNF548-206ENST00000597047 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
ZNF548-206ENST00000597047 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
ZNF548-206ENST00000597047 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
ZNF548-206ENST00000597047 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
ZNF548-206ENST00000597047 CSB-PGBD3P0DP91 1061 aa12.6□□□□□ -0.39
ZNF548-206ENST00000597047 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
ZNF548-206ENST00000597047 AFF2P51816 1311 aa12.6□□□□□ -0.39
ZNF548-206ENST00000597047 NSD2O96028 1365 aa12.59□□□□□ -0.39
ZNF548-206ENST00000597047 ANP32CO43423 234 aa12.59□□□□□ -0.39
ZNF548-206ENST00000597047 USP21Q9UK80 565 aa12.59□□□□□ -0.39
ZNF548-206ENST00000597047 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
ZNF548-206ENST00000597047 ANKRD26Q9UPS8 1709 aa12.59□□□□□ -0.39
ZNF548-206ENST00000597047 MAP3K19Q56UN5 1328 aa12.59□□□□□ -0.39
ZNF548-206ENST00000597047 SLIT3O75094 1523 aa12.58□□□□□ -0.4
ZNF548-206ENST00000597047 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
ZNF548-206ENST00000597047 CRYBG1Q9Y4K1 1723 aa12.58□□□□□ -0.4
ZNF548-206ENST00000597047 LTN1O94822 1766 aa12.58□□□□□ -0.4
ZNF548-206ENST00000597047 DIEXFQ68CQ4 756 aaKnown RBP12.57□□□□□ -0.4
ZNF548-206ENST00000597047 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
ZNF548-206ENST00000597047 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
ZNF548-206ENST00000597047 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
ZNF548-206ENST00000597047 MTHFSP49914 203 aa12.56□□□□□ -0.4
ZNF548-206ENST00000597047 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms