RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 SEPT12Q8IYM1 358 aa22.78■■□□□ 1.24
PSMC4-204ENST00000596386 ONECUT3O60422 494 aaPredicted RBP22.77■■□□□ 1.24
PSMC4-204ENST00000596386 CCDC9Q9Y3X0 531 aaKnown RBP22.77■■□□□ 1.24
PSMC4-204ENST00000596386 PAK3O75914 559 aaPredicted RBP22.76■■□□□ 1.23
PSMC4-204ENST00000596386 CDK19Q9BWU1 502 aa22.76■■□□□ 1.23
PSMC4-204ENST00000596386 BLMP54132 1417 aaPredicted RBP22.75■■□□□ 1.23
PSMC4-204ENST00000596386 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
PSMC4-204ENST00000596386 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
PSMC4-204ENST00000596386 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
PSMC4-204ENST00000596386 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
PSMC4-204ENST00000596386 PHRF1Q9P1Y6 1649 aaKnown RBP22.71■■□□□ 1.23
PSMC4-204ENST00000596386 PRDM11Q9NQV5 511 aa22.7■■□□□ 1.22
PSMC4-204ENST00000596386 ACEP12821 1306 aa22.69■■□□□ 1.22
PSMC4-204ENST00000596386 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
PSMC4-204ENST00000596386 KRT27Q7Z3Y8 459 aa22.69■■□□□ 1.22
PSMC4-204ENST00000596386 ZRANB1Q9UGI0 708 aa22.69■■□□□ 1.22
PSMC4-204ENST00000596386 CENPJQ9HC77 1338 aaPredicted RBP22.68■■□□□ 1.22
PSMC4-204ENST00000596386 A0A0G2JS52 829 aa22.67■■□□□ 1.22
PSMC4-204ENST00000596386 MYT1Q01538 1121 aa22.67■■□□□ 1.22
PSMC4-204ENST00000596386 FAM98CQ17RN3 349 aaKnown RBP22.67■■□□□ 1.22
PSMC4-204ENST00000596386 NBPF8Q3BBV2 869 aa22.67■■□□□ 1.22
PSMC4-204ENST00000596386 KIAA0232Q92628 1395 aa22.66■■□□□ 1.22
PSMC4-204ENST00000596386 SPATA31A5Q5VU36 1347 aa22.66■■□□□ 1.22
PSMC4-204ENST00000596386 SPATA31A7Q8IWB4 1347 aa22.66■■□□□ 1.22
PSMC4-204ENST00000596386 QRICH2Q9H0J4 1663 aa22.66■■□□□ 1.22
PSMC4-204ENST00000596386 L3MBTL2Q969R5 705 aa22.65■■□□□ 1.22
PSMC4-204ENST00000596386 SRPK2P78362 688 aaKnown RBP22.64■■□□□ 1.21
PSMC4-204ENST00000596386 SF3B2Q13435 895 aaKnown RBP22.64■■□□□ 1.21
PSMC4-204ENST00000596386 THSD7AQ9UPZ6 1657 aa22.64■■□□□ 1.21
PSMC4-204ENST00000596386 PPIP5K1Q6PFW1 1433 aa22.64■■□□□ 1.21
PSMC4-204ENST00000596386 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
PSMC4-204ENST00000596386 DEFB132Q7Z7B7 95 aa22.63■■□□□ 1.21
PSMC4-204ENST00000596386 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
PSMC4-204ENST00000596386 TRPM1Q7Z4N2 1603 aa22.61■■□□□ 1.21
PSMC4-204ENST00000596386 CHRNA2Q15822 529 aa22.61■■□□□ 1.21
PSMC4-204ENST00000596386 ZC3H6P61129 1189 aaKnown RBP22.6■■□□□ 1.21
PSMC4-204ENST00000596386 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
PSMC4-204ENST00000596386 CABP2Q9NPB3 220 aa22.6■■□□□ 1.21
PSMC4-204ENST00000596386 USP19O94966 1318 aa22.59■■□□□ 1.21
PSMC4-204ENST00000596386 SPATA31A1Q5TZJ5 1347 aa22.59■■□□□ 1.21
PSMC4-204ENST00000596386 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
PSMC4-204ENST00000596386 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
PSMC4-204ENST00000596386 CPDO75976 1380 aa22.58■■□□□ 1.21
PSMC4-204ENST00000596386 STRN4Q9NRL3 753 aa22.56■■□□□ 1.2
PSMC4-204ENST00000596386 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
PSMC4-204ENST00000596386 USP6P35125 1406 aa22.55■■□□□ 1.2
PSMC4-204ENST00000596386 SSH2Q76I76 1423 aa22.55■■□□□ 1.2
PSMC4-204ENST00000596386 RGPD1P0DJD0 1748 aa22.54■■□□□ 1.2
PSMC4-204ENST00000596386 ROCK2O75116 1388 aaKnown RBP22.54■■□□□ 1.2
PSMC4-204ENST00000596386 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
PSMC4-204ENST00000596386 CAMTA1Q9Y6Y1 1673 aa22.54■■□□□ 1.2
PSMC4-204ENST00000596386 BAG6P46379 1132 aa22.53■■□□□ 1.2
PSMC4-204ENST00000596386 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
PSMC4-204ENST00000596386 CABP1Q9NZU7 370 aa22.53■■□□□ 1.2
PSMC4-204ENST00000596386 FAM182BQ5T319 152 aa22.52■■□□□ 1.2
PSMC4-204ENST00000596386 EVC2Q86UK5 1308 aa22.52■■□□□ 1.2
PSMC4-204ENST00000596386 GCP02774 474 aa22.51■■□□□ 1.19
PSMC4-204ENST00000596386 EVA1CP58658 441 aa22.5■■□□□ 1.19
PSMC4-204ENST00000596386 TNS1Q9HBL0 1735 aaKnown RBP22.5■■□□□ 1.19
PSMC4-204ENST00000596386 SLIT3O75094 1523 aa22.49■■□□□ 1.19
PSMC4-204ENST00000596386 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
PSMC4-204ENST00000596386 USP35Q9P2H5 1018 aa22.49■■□□□ 1.19
PSMC4-204ENST00000596386 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
PSMC4-204ENST00000596386 LARP1Q6PKG0 1096 aaKnown RBP22.48■■□□□ 1.19
PSMC4-204ENST00000596386 PIK3C2AO00443 1686 aa22.47■■□□□ 1.19
PSMC4-204ENST00000596386 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
PSMC4-204ENST00000596386 NLRP6P59044 892 aa22.46■■□□□ 1.19
PSMC4-204ENST00000596386 EN1Q05925 392 aaPredicted RBP22.45■■□□□ 1.18
PSMC4-204ENST00000596386 FAM196AQ6ZSG2 479 aa22.45■■□□□ 1.18
PSMC4-204ENST00000596386 TCP11L2Q8N4U5 519 aa22.45■■□□□ 1.18
PSMC4-204ENST00000596386 AKAP12Q02952 1782 aa22.43■■□□□ 1.18
PSMC4-204ENST00000596386 AATKQ6ZMQ8 1374 aa22.43■■□□□ 1.18
PSMC4-204ENST00000596386 THRAP3Q9Y2W1 955 aaKnown RBP22.43■■□□□ 1.18
PSMC4-204ENST00000596386 SBNO2Q9Y2G9 1366 aa22.42■■□□□ 1.18
PSMC4-204ENST00000596386 LRP5O75197 1615 aa22.42■■□□□ 1.18
PSMC4-204ENST00000596386 CRB1P82279 1406 aa22.41■■□□□ 1.18
PSMC4-204ENST00000596386 PARP4Q9UKK3 1724 aaKnown RBP22.41■■□□□ 1.18
PSMC4-204ENST00000596386 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
PSMC4-204ENST00000596386 ZNF692Q9BU19 519 aaPredicted RBP22.41■■□□□ 1.18
PSMC4-204ENST00000596386 TRIM37O94972 964 aa22.4■■□□□ 1.18
PSMC4-204ENST00000596386 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
PSMC4-204ENST00000596386 TTC21BQ7Z4L5 1316 aa22.39■■□□□ 1.18
PSMC4-204ENST00000596386 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.17
PSMC4-204ENST00000596386 COL18A1P39060 1754 aa22.39■■□□□ 1.17
PSMC4-204ENST00000596386 PSDA5PKW4 1024 aaPredicted RBP22.38■■□□□ 1.17
PSMC4-204ENST00000596386 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
PSMC4-204ENST00000596386 EZH2Q15910 746 aaKnown RBP22.36■■□□□ 1.17
PSMC4-204ENST00000596386 CAMKK2Q96RR4 588 aa22.36■■□□□ 1.17
PSMC4-204ENST00000596386 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
PSMC4-204ENST00000596386 MON2Q7Z3U7 1717 aa22.36■■□□□ 1.17
PSMC4-204ENST00000596386 KTN1Q86UP2 1357 aaKnown RBP22.36■■□□□ 1.17
PSMC4-204ENST00000596386 PARD3Q8TEW0 1356 aa22.36■■□□□ 1.17
PSMC4-204ENST00000596386 KCNH5Q8NCM2 988 aa22.35■■□□□ 1.17
PSMC4-204ENST00000596386 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
PSMC4-204ENST00000596386 APBA3O96018 575 aa22.34■■□□□ 1.17
PSMC4-204ENST00000596386 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
PSMC4-204ENST00000596386 NFAT5O94916 1531 aa22.33■■□□□ 1.17
PSMC4-204ENST00000596386 ARHGEF25Q86VW2 580 aa22.33■■□□□ 1.17
PSMC4-204ENST00000596386 WDR17Q8IZU2 1322 aa22.32■■□□□ 1.16
PSMC4-204ENST00000596386 TOM1L2Q6ZVM7 507 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms