RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PANK3Q9H999 370 aa17.93■□□□□ 0.46
SHKBP1-209ENST00000595803 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
SHKBP1-209ENST00000595803 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
SHKBP1-209ENST00000595803 WASLO00401 505 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-209ENST00000595803 YY1P25490 414 aa17.9■□□□□ 0.46
SHKBP1-209ENST00000595803 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
SHKBP1-209ENST00000595803 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
SHKBP1-209ENST00000595803 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
SHKBP1-209ENST00000595803 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-209ENST00000595803 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
SHKBP1-209ENST00000595803 SLIT2O94813 1529 aa17.83■□□□□ 0.45
SHKBP1-209ENST00000595803 PER1O15534 1290 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-209ENST00000595803 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-209ENST00000595803 NINLQ9Y2I6 1382 aa17.82■□□□□ 0.44
SHKBP1-209ENST00000595803 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
SHKBP1-209ENST00000595803 CABP1Q9NZU7 370 aa17.82■□□□□ 0.44
SHKBP1-209ENST00000595803 CCDC61Q9Y6R9 512 aa17.82■□□□□ 0.44
SHKBP1-209ENST00000595803 PXDNQ92626 1479 aa17.82■□□□□ 0.44
SHKBP1-209ENST00000595803 BAG6P46379 1132 aa17.81■□□□□ 0.44
SHKBP1-209ENST00000595803 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
SHKBP1-209ENST00000595803 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
SHKBP1-209ENST00000595803 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-209ENST00000595803 NUTM2FA1L443 756 aa17.79■□□□□ 0.44
SHKBP1-209ENST00000595803 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-209ENST00000595803 R3HDM1Q15032 1099 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-209ENST00000595803 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
SHKBP1-209ENST00000595803 ADGRB2O60241 1585 aa17.78■□□□□ 0.44
SHKBP1-209ENST00000595803 NPHP3Q7Z494 1330 aa17.77■□□□□ 0.44
SHKBP1-209ENST00000595803 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.43
SHKBP1-209ENST00000595803 MYOM1P52179 1685 aa17.77■□□□□ 0.43
SHKBP1-209ENST00000595803 USP32Q8NFA0 1604 aa17.76■□□□□ 0.43
SHKBP1-209ENST00000595803 RALBP1Q15311 655 aa17.76■□□□□ 0.43
SHKBP1-209ENST00000595803 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-209ENST00000595803 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
SHKBP1-209ENST00000595803 PRR36Q9H6K5 1346 aa17.75■□□□□ 0.43
SHKBP1-209ENST00000595803 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
SHKBP1-209ENST00000595803 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
SHKBP1-209ENST00000595803 KTN1Q86UP2 1357 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-209ENST00000595803 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
SHKBP1-209ENST00000595803 XPCQ01831 940 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-209ENST00000595803 IFFO2Q5TF58 517 aa17.74■□□□□ 0.43
SHKBP1-209ENST00000595803 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-209ENST00000595803 RGPD1P0DJD0 1748 aa17.73■□□□□ 0.43
SHKBP1-209ENST00000595803 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-209ENST00000595803 AMER1Q5JTC6 1135 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-209ENST00000595803 PLCH1Q4KWH8 1693 aa17.72■□□□□ 0.43
SHKBP1-209ENST00000595803 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
SHKBP1-209ENST00000595803 VPS72Q15906 364 aa17.71■□□□□ 0.43
SHKBP1-209ENST00000595803 ANKARQ7Z5J8 1434 aa17.71■□□□□ 0.43
SHKBP1-209ENST00000595803 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.42
SHKBP1-209ENST00000595803 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
SHKBP1-209ENST00000595803 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
SHKBP1-209ENST00000595803 NPC1L1Q9UHC9 1359 aa17.7■□□□□ 0.42
SHKBP1-209ENST00000595803 ONECUT3O60422 494 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-209ENST00000595803 ESCO1Q5FWF5 840 aa17.7■□□□□ 0.42
SHKBP1-209ENST00000595803 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-209ENST00000595803 ATP7BP35670 1465 aa17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 FOXO3O43524 673 aa17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 PMFBP1Q8TBY8 1022 aa17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 TNS1Q9HBL0 1735 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 NWD2Q9ULI1 1742 aa17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 ACEP12821 1306 aa17.69■□□□□ 0.42
SHKBP1-209ENST00000595803 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-209ENST00000595803 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
SHKBP1-209ENST00000595803 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
SHKBP1-209ENST00000595803 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
SHKBP1-209ENST00000595803 CD163L1Q9NR16 1453 aa17.67■□□□□ 0.42
SHKBP1-209ENST00000595803 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-209ENST00000595803 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
SHKBP1-209ENST00000595803 CPSF1Q10570 1443 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-209ENST00000595803 A0A0G2JS52 829 aa17.66■□□□□ 0.42
SHKBP1-209ENST00000595803 MYT1Q01538 1121 aa17.66■□□□□ 0.42
SHKBP1-209ENST00000595803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.65■□□□□ 0.42
SHKBP1-209ENST00000595803 NSD2O96028 1365 aa17.64■□□□□ 0.41
SHKBP1-209ENST00000595803 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-209ENST00000595803 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
SHKBP1-209ENST00000595803 FYB1O15117 783 aa17.63■□□□□ 0.41
SHKBP1-209ENST00000595803 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
SHKBP1-209ENST00000595803 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
SHKBP1-209ENST00000595803 ITSN1Q15811 1721 aa17.63■□□□□ 0.41
SHKBP1-209ENST00000595803 ABCA3Q99758 1704 aa17.62■□□□□ 0.41
SHKBP1-209ENST00000595803 EZH2Q15910 746 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-209ENST00000595803 GGNBP2Q9H3C7 697 aa17.62■□□□□ 0.41
SHKBP1-209ENST00000595803 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-209ENST00000595803 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 PSME1Q06323 249 aa17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 FAM182BQ5T319 152 aa17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 NLRP13Q86W25 1043 aa17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 POLR3AO14802 1390 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-209ENST00000595803 FAM98CQ17RN3 349 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-209ENST00000595803 CCDC184Q52MB2 194 aa17.6■□□□□ 0.41
SHKBP1-209ENST00000595803 CAMTA1Q9Y6Y1 1673 aa17.6■□□□□ 0.41
SHKBP1-209ENST00000595803 NRAPQ86VF7 1730 aa17.6■□□□□ 0.41
SHKBP1-209ENST00000595803 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-209ENST00000595803 AKAP12Q02952 1782 aa17.58■□□□□ 0.41
SHKBP1-209ENST00000595803 KIF1AQ12756 1690 aa17.58■□□□□ 0.41
SHKBP1-209ENST00000595803 USP6P35125 1406 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms